Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is mltB [H]
Identifier: 117919442
GI number: 117919442
Start: 1163145
End: 1164209
Strand: Reverse
Name: mltB [H]
Synonym: Shewana3_0993
Alternate gene names: 117919442
Gene position: 1164209-1163145 (Counterclockwise)
Preceding gene: 117919443
Following gene: 117919441
Centisome position: 23.41
GC content: 48.83
Gene sequence:
>1065_bases ATGCCTATTCTTCGAGCTTGTTTGGCTCCACTGGCAGTACTTTGCCTCAGTTCATATCTCCTTGGTTGCTCGACGGCAAA CGAGCCTGCGGCCCCCACACCGCAGCCAAGTGCGGCGGTGACCACACAGGCGCCAACGCCAGTATTACCCGAGGCCTTAA AGGCTGAGTTTATTAAAACCCAAATGGCACAAGGCTTTACCCAAGCCGAAGTTGAAAGTTTTTTAGCAAAGGCCAACTAC AACCAAGCCGTTATCGATGCTATTTCTCGCCCTTGGGAAGCCAAGCCTTGGCATCAGTATTATCCGATTTTCCTCACCGA GAAACGCCTCAATGCAGGTCTAGCCTTCTGGAAAAAACACGAGGCAACGATTGCCAAGGCCGCGACAAAGTACCAAGTCG AGCCACAAATTATTGTGGCCATTATTGGTATCGAAACCTTCTATGGTCAGTACACAGGTAATTATCCGGTAATCGATGCG CTCTATACCTTAGGGTTTTATTACGAGCCAAGAGCCACTTTCTTTCGCAAGGAATTTGGCGAGCTGATGAAGCTGGTAAA AGAAGAACACTTAGATATCAATAGCCTCAAGGGTTCCTACGCCGGAGCCATGGGCTTTGGTCAGTTTATTCCTTCAAGCT ACCGCCACTATGCCGTGGATTTTGATGGCAGCGGTAACCGTGATTTACTCCAGAGTCCAGAGGATGCCATTGGCAGTGTT GCCAATTATTTCCATGAACACGGCTGGCAGTTGCATGCACCCGTTGCGCTCCCTTTAGTGAATAGCAGTGCCAATGCGCC TAAAGCCAAAGTGTGGGCTGGTGAGAAGTTGCAGTACAAGGTCTCTGATATTCTCAGCCCAAGCTTATCGCTGGCCACCG CCCGCGATTTAGATGCCTCGCAAAAGGCCATGCTCATCGAGCTCGAACAAGTGGGTAGCAAGGACTACTGGCTAGGACTC AATAACTTTTATGTGATCACCCGTTATAACCGTAGCCCTTTGTATTCCATGGCCGTTTATCAATTTAGCCAACAACTGAA GCAACAACATGACGCTAAAAAATAA
Upstream 100 bases:
>100_bases GTGGTACTTCCATGCTGACATTGATGACAGGGTTTGGCATTCTTATGAGCATTCATACCCATAGACGTTTTGTAGATAGA TAATTTTTAGGGACTTTTTA
Downstream 100 bases:
>100_bases CCTTTTACCGCTCTTGATGCTCGGCTGCTGTTTTGTGCTCGCGGCCTGCTCGAGTTCTAATTCTGGCTCTGCCAGCGAAA AGAACAAGAACATGGATCCC
Product: lytic murein transglycosylase B
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MPILRACLAPLAVLCLSSYLLGCSTANEPAAPTPQPSAAVTTQAPTPVLPEALKAEFIKTQMAQGFTQAEVESFLAKANY NQAVIDAISRPWEAKPWHQYYPIFLTEKRLNAGLAFWKKHEATIAKAATKYQVEPQIIVAIIGIETFYGQYTGNYPVIDA LYTLGFYYEPRATFFRKEFGELMKLVKEEHLDINSLKGSYAGAMGFGQFIPSSYRHYAVDFDGSGNRDLLQSPEDAIGSV ANYFHEHGWQLHAPVALPLVNSSANAPKAKVWAGEKLQYKVSDILSPSLSLATARDLDASQKAMLIELEQVGSKDYWLGL NNFYVITRYNRSPLYSMAVYQFSQQLKQQHDAKK
Sequences:
>Translated_354_residues MPILRACLAPLAVLCLSSYLLGCSTANEPAAPTPQPSAAVTTQAPTPVLPEALKAEFIKTQMAQGFTQAEVESFLAKANY NQAVIDAISRPWEAKPWHQYYPIFLTEKRLNAGLAFWKKHEATIAKAATKYQVEPQIIVAIIGIETFYGQYTGNYPVIDA LYTLGFYYEPRATFFRKEFGELMKLVKEEHLDINSLKGSYAGAMGFGQFIPSSYRHYAVDFDGSGNRDLLQSPEDAIGSV ANYFHEHGWQLHAPVALPLVNSSANAPKAKVWAGEKLQYKVSDILSPSLSLATARDLDASQKAMLIELEQVGSKDYWLGL NNFYVITRYNRSPLYSMAVYQFSQQLKQQHDAKK >Mature_353_residues PILRACLAPLAVLCLSSYLLGCSTANEPAAPTPQPSAAVTTQAPTPVLPEALKAEFIKTQMAQGFTQAEVESFLAKANYN QAVIDAISRPWEAKPWHQYYPIFLTEKRLNAGLAFWKKHEATIAKAATKYQVEPQIIVAIIGIETFYGQYTGNYPVIDAL YTLGFYYEPRATFFRKEFGELMKLVKEEHLDINSLKGSYAGAMGFGQFIPSSYRHYAVDFDGSGNRDLLQSPEDAIGSVA NYFHEHGWQLHAPVALPLVNSSANAPKAKVWAGEKLQYKVSDILSPSLSLATARDLDASQKAMLIELEQVGSKDYWLGLN NFYVITRYNRSPLYSMAVYQFSQQLKQQHDAKK
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=292, Percent_Identity=39.3835616438356, Blast_Score=195, Evalue=5e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 39467; Mature: 39336
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILRACLAPLAVLCLSSYLLGCSTANEPAAPTPQPSAAVTTQAPTPVLPEALKAEFIKT CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHH QMAQGFTQAEVESFLAKANYNQAVIDAISRPWEAKPWHQYYPIFLTEKRLNAGLAFWKKH HHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCHHHCCHHHHHHH EATIAKAATKYQVEPQIIVAIIGIETFYGQYTGNYPVIDALYTLGFYYEPRATFFRKEFG HHHHHHHHHHEECCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHHCEEECCHHHHHHHHHH ELMKLVKEEHLDINSLKGSYAGAMGFGQFIPSSYRHYAVDFDGSGNRDLLQSPEDAIGSV HHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCCHHHHHHH ANYFHEHGWQLHAPVALPLVNSSANAPKAKVWAGEKLQYKVSDILSPSLSLATARDLDAS HHHHHHCCCEEECCEEEEEECCCCCCCCCEEECCCCCEEHHHHHCCCCHHHHHHHCCCCC QKAMLIELEQVGSKDYWLGLNNFYVITRYNRSPLYSMAVYQFSQQLKQQHDAKK CHHEEEEHHHCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PILRACLAPLAVLCLSSYLLGCSTANEPAAPTPQPSAAVTTQAPTPVLPEALKAEFIKT CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHH QMAQGFTQAEVESFLAKANYNQAVIDAISRPWEAKPWHQYYPIFLTEKRLNAGLAFWKKH HHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCHHHCCHHHHHHH EATIAKAATKYQVEPQIIVAIIGIETFYGQYTGNYPVIDALYTLGFYYEPRATFFRKEFG HHHHHHHHHHEECCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHHCEEECCHHHHHHHHHH ELMKLVKEEHLDINSLKGSYAGAMGFGQFIPSSYRHYAVDFDGSGNRDLLQSPEDAIGSV HHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCCHHHHHHH ANYFHEHGWQLHAPVALPLVNSSANAPKAKVWAGEKLQYKVSDILSPSLSLATARDLDAS HHHHHHCCCEEECCEEEEEECCCCCCCCCEEECCCCCEEHHHHHCCCCHHHHHHHCCCCC QKAMLIELEQVGSKDYWLGLNNFYVITRYNRSPLYSMAVYQFSQQLKQQHDAKK CHHEEEEHHHCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]