Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919311
Identifier: 117919311
GI number: 117919311
Start: 999571
End: 1001307
Strand: Direct
Name: 117919311
Synonym: Shewana3_0859
Alternate gene names: NA
Gene position: 999571-1001307 (Clockwise)
Preceding gene: 117919310
Following gene: 117919314
Centisome position: 20.1
GC content: 45.94
Gene sequence:
>1737_bases ATGAAGAAGATTGTTATTGCTGCGGCAATTATTGCAGCGGGAGCAGGTGCTTATTGGTACACTCAGCATGGAACTAGCTC GAGTGCTTCGGCCAATCCTTTGCTTGATTATATCCCTGCCGACACCCCAGTATTTTCAGGTCAGTTAAAACCTTTCCCAC TGAAAAACTACCTGCAATCTATTTCTGGCAATTACCAGCAATATTCAACAGATTCGTTGGCCGAATTAGGCGAATTAGAT AGCCCTATGGCCAAGTTTTTTGTCAGCATCTATACGCAGTATATGGATGGGATAAAAAATCCAACCCAATTGCTTAAGAC CTTTGGTTTACCAAATGAAGTCGAGCCTTTTTTCTACACCTTAGGCGTGATCCCTGTTCTTAAAACCAATGTGGATCAAA TCGATGCATTTTGGGCCGTCTTGGATAAAGCCGAGAAAGACAGCGGCTTCACCCATGAAAAGCGCACCTTAGCGGGCGTT GATTATCGCGCTTATTCACTCGCCGAAGAAGGTTCTACTGAGAAGGTTGACCTGTTATTTGCCCATAAAGATGGCATCTT AACTGTGACCTTGTCTGGCACAACGATTGAGCCAGAAATCTTAGAAATGGCCTTTGGATTAAAGAAACCGACTCAATCCT TAGCCGCTTCAGGCATGCTGAAAGACATCATCAAAACCCATGGTTTTATGGAAGATAGCATCAGCTTTATCAACCACGTT GAGATTGTTAAAGCGATTACCTCTCCCGATGGCAATATGCTAGGCAAACAGCTCACTCAGTTCATGGCAGAAGAAAGCCA AGGTGAAGATCCTTTTGCTGAGATTCGCACTCCTGAATGTAAAACTGAGCTAACCGCCATTGCCGCTAACTGGCCTCGTA CTGTGGCTGGGTTAACCGCATTTAGCTCGACCGAAAAAGAAAGCCATATGGCTGCCTCTTTTGTGGTTGAAAGCAAAAAC CAGGCAATCTTAACCGCATTGCAAAAAATGCGCGGCTACATTCCAACCCACTTAGCCGATATTAACAGCACTATCTTCTC TATGGGGCTGGGGATTGACGTTAACGAAGTTGCGCCTTCACTGACGGCGATCTGGGATGACCTGCAAAAGCCGCAGTTAA CCTGCGCGCCGCTTGCCGAGTTGCAAGCAGAGTTAAGCCAACAGAGCCCTGCGATGTTAGGTATGTTTACTGGCATGGCT AATGGGGTTAAAGGTGTGAGCCTGTCATTGCTCGATTATAAGATGAGCACACAAGACCAAGAGCCAAAGCTTGAAAGCTT AGATGCCTTAGTGAGCTTAACGGCTGATAATCCTTCAATGCTGTTCAATATGGTGAAACCTTTTGCTCCAATGTTAGCTG AACTGCAAGTTGCGGATAATGGCGAGCCTACCGACTTATCACCACTGTTAATGTTGCCACCTGAGATGAACATCAAGCCG ATGCTGGCAATTAAGGGACAACACTTAGTGGTTTACTCTGGCGATAAAGGCTTAGCATTAGCCAACAAACTGGCTGGCGA GAAGCCATTGGCCAATGGGCTTTACAGCATGTCGGCTGATTACGGTAAGATGTTTACCCCGGTGCTGACCCTGTTAGAAC TGACTGGCGAGCCGATTCCTGAAGAGCTGCAAATGCTGAAAGATTACAATATGCGCGTGCAAATGAGCTTCGATGTGAAC AAACAAGGCATAGTGTTTGGTTCTGTGATGAACTCAAAAGCGAGCGAGAAGAAGTAA
Upstream 100 bases:
>100_bases CGTGTAAAAAGGAATGACAACAGGTCAGTATTTAAATACCGAAGGTGAGTGCTTTCGGTATTATTTTTGTCACTTTGACG GTTATTAAATGGAGTTTTAG
Downstream 100 bases:
>100_bases GCTTGATACCTTAGAGTGTTAATCGAAAAGCCAGCTGATTGCTGGCTTTTTTGTTAATTGGCTTGCGCTAACTTAGGTTG AGAACCGAGGGGCGTGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MKKIVIAAAIIAAGAGAYWYTQHGTSSSASANPLLDYIPADTPVFSGQLKPFPLKNYLQSISGNYQQYSTDSLAELGELD SPMAKFFVSIYTQYMDGIKNPTQLLKTFGLPNEVEPFFYTLGVIPVLKTNVDQIDAFWAVLDKAEKDSGFTHEKRTLAGV DYRAYSLAEEGSTEKVDLLFAHKDGILTVTLSGTTIEPEILEMAFGLKKPTQSLAASGMLKDIIKTHGFMEDSISFINHV EIVKAITSPDGNMLGKQLTQFMAEESQGEDPFAEIRTPECKTELTAIAANWPRTVAGLTAFSSTEKESHMAASFVVESKN QAILTALQKMRGYIPTHLADINSTIFSMGLGIDVNEVAPSLTAIWDDLQKPQLTCAPLAELQAELSQQSPAMLGMFTGMA NGVKGVSLSLLDYKMSTQDQEPKLESLDALVSLTADNPSMLFNMVKPFAPMLAELQVADNGEPTDLSPLLMLPPEMNIKP MLAIKGQHLVVYSGDKGLALANKLAGEKPLANGLYSMSADYGKMFTPVLTLLELTGEPIPEELQMLKDYNMRVQMSFDVN KQGIVFGSVMNSKASEKK
Sequences:
>Translated_578_residues MKKIVIAAAIIAAGAGAYWYTQHGTSSSASANPLLDYIPADTPVFSGQLKPFPLKNYLQSISGNYQQYSTDSLAELGELD SPMAKFFVSIYTQYMDGIKNPTQLLKTFGLPNEVEPFFYTLGVIPVLKTNVDQIDAFWAVLDKAEKDSGFTHEKRTLAGV DYRAYSLAEEGSTEKVDLLFAHKDGILTVTLSGTTIEPEILEMAFGLKKPTQSLAASGMLKDIIKTHGFMEDSISFINHV EIVKAITSPDGNMLGKQLTQFMAEESQGEDPFAEIRTPECKTELTAIAANWPRTVAGLTAFSSTEKESHMAASFVVESKN QAILTALQKMRGYIPTHLADINSTIFSMGLGIDVNEVAPSLTAIWDDLQKPQLTCAPLAELQAELSQQSPAMLGMFTGMA NGVKGVSLSLLDYKMSTQDQEPKLESLDALVSLTADNPSMLFNMVKPFAPMLAELQVADNGEPTDLSPLLMLPPEMNIKP MLAIKGQHLVVYSGDKGLALANKLAGEKPLANGLYSMSADYGKMFTPVLTLLELTGEPIPEELQMLKDYNMRVQMSFDVN KQGIVFGSVMNSKASEKK >Mature_578_residues MKKIVIAAAIIAAGAGAYWYTQHGTSSSASANPLLDYIPADTPVFSGQLKPFPLKNYLQSISGNYQQYSTDSLAELGELD SPMAKFFVSIYTQYMDGIKNPTQLLKTFGLPNEVEPFFYTLGVIPVLKTNVDQIDAFWAVLDKAEKDSGFTHEKRTLAGV DYRAYSLAEEGSTEKVDLLFAHKDGILTVTLSGTTIEPEILEMAFGLKKPTQSLAASGMLKDIIKTHGFMEDSISFINHV EIVKAITSPDGNMLGKQLTQFMAEESQGEDPFAEIRTPECKTELTAIAANWPRTVAGLTAFSSTEKESHMAASFVVESKN QAILTALQKMRGYIPTHLADINSTIFSMGLGIDVNEVAPSLTAIWDDLQKPQLTCAPLAELQAELSQQSPAMLGMFTGMA NGVKGVSLSLLDYKMSTQDQEPKLESLDALVSLTADNPSMLFNMVKPFAPMLAELQVADNGEPTDLSPLLMLPPEMNIKP MLAIKGQHLVVYSGDKGLALANKLAGEKPLANGLYSMSADYGKMFTPVLTLLELTGEPIPEELQMLKDYNMRVQMSFDVN KQGIVFGSVMNSKASEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62942; Mature: 62942
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIVIAAAIIAAGAGAYWYTQHGTSSSASANPLLDYIPADTPVFSGQLKPFPLKNYLQS CCHHEEEHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHH ISGNYQQYSTDSLAELGELDSPMAKFFVSIYTQYMDGIKNPTQLLKTFGLPNEVEPFFYT HCCCCHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHH LGVIPVLKTNVDQIDAFWAVLDKAEKDSGFTHEKRTLAGVDYRAYSLAEEGSTEKVDLLF HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCCCCCCEEEEEE AHKDGILTVTLSGTTIEPEILEMAFGLKKPTQSLAASGMLKDIIKTHGFMEDSISFINHV EECCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EIVKAITSPDGNMLGKQLTQFMAEESQGEDPFAEIRTPECKTELTAIAANWPRTVAGLTA HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHH FSSTEKESHMAASFVVESKNQAILTALQKMRGYIPTHLADINSTIFSMGLGIDVNEVAPS HCCCCHHHHHHHHHEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH LTAIWDDLQKPQLTCAPLAELQAELSQQSPAMLGMFTGMANGVKGVSLSLLDYKMSTQDQ HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCC EPKLESLDALVSLTADNPSMLFNMVKPFAPMLAELQVADNGEPTDLSPLLMLPPEMNIKP CCCHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEECCCCCCCCE MLAIKGQHLVVYSGDKGLALANKLAGEKPLANGLYSMSADYGKMFTPVLTLLELTGEPIP EEEECCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH EELQMLKDYNMRVQMSFDVNKQGIVFGSVMNSKASEKK HHHHHHHCCCCEEEEEECCCCCCEEEEHHHCCCCCCCC >Mature Secondary Structure MKKIVIAAAIIAAGAGAYWYTQHGTSSSASANPLLDYIPADTPVFSGQLKPFPLKNYLQS CCHHEEEHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHH ISGNYQQYSTDSLAELGELDSPMAKFFVSIYTQYMDGIKNPTQLLKTFGLPNEVEPFFYT HCCCCHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHH LGVIPVLKTNVDQIDAFWAVLDKAEKDSGFTHEKRTLAGVDYRAYSLAEEGSTEKVDLLF HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCCCCCCEEEEEE AHKDGILTVTLSGTTIEPEILEMAFGLKKPTQSLAASGMLKDIIKTHGFMEDSISFINHV EECCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EIVKAITSPDGNMLGKQLTQFMAEESQGEDPFAEIRTPECKTELTAIAANWPRTVAGLTA HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHH FSSTEKESHMAASFVVESKNQAILTALQKMRGYIPTHLADINSTIFSMGLGIDVNEVAPS HCCCCHHHHHHHHHEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH LTAIWDDLQKPQLTCAPLAELQAELSQQSPAMLGMFTGMANGVKGVSLSLLDYKMSTQDQ HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCC EPKLESLDALVSLTADNPSMLFNMVKPFAPMLAELQVADNGEPTDLSPLLMLPPEMNIKP CCCHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEECCCCCCCCE MLAIKGQHLVVYSGDKGLALANKLAGEKPLANGLYSMSADYGKMFTPVLTLLELTGEPIP EEEECCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH EELQMLKDYNMRVQMSFDVNKQGIVFGSVMNSKASEKK HHHHHHHCCCCEEEEEECCCCCCEEEEHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA