Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is mlhB [H]
Identifier: 117919062
GI number: 117919062
Start: 713656
End: 714567
Strand: Direct
Name: mlhB [H]
Synonym: Shewana3_0609
Alternate gene names: 117919062
Gene position: 713656-714567 (Clockwise)
Preceding gene: 117919061
Following gene: 117919063
Centisome position: 14.35
GC content: 51.21
Gene sequence:
>912_bases ATGCCAAGCTGGCAAGCATCTGTATTAAATACTATTTTATCTTATGTGGCACGGCCATCCATCAGCCGTGGCAAGGCTAA ACTCCCCCTTAATCAAGTACGGCAACGCTTATTAGAGCTGGATAAGCGCTGGCTGCCGTGGCCCGAAAAACTCGTTACGG CCTCGATTCCCTTGCAACATTCTACCCTGTTGCATTATGTGCTGCTGAATGACACACCGCGTTTGGGCAATCTGTTTTAC ATTCGAGGCGGCGGATTTTGTTTTAAAACTCCCCATGCCCACGCAAGACTGGTGGCCGATATCAGTGAGCGTTGTCGCCT CGATACGTTTATCCCAGATTATCGTTTAGCGCCGGAGCATCCGTATCCCGCGCCCTGTGACGATGTGCTCGAGGCTTACC TGCACTTAATTGAGTTGAAAGGCAGCGATAATCTGGTGTTGATGGGCGATTCCGCCGGCGGCAATTTAGCCTTGAGTCTG CTGCTCGAACTGAAAAAGCGCCATCTGCCCATGCCTAAAGCCTGTGTGTTGTTGTCACCCGCGCTTGATTTAGCCATTAC CGGCGATACCGAGCTGATTTTAGGGGCGGACGATCCGTTCTTTACCATTGAGTCGCTTTTGCGGCTGCGCGGCGCTTATC TTGCTGGGGCGGATCCTATGTCTGAACGGGTTTCGCCTTTGCAGGGGAACTTGGCTGACTTGCCGCCACTCTTAGTGATT GCCGGTACGCGCGAGTTGCTTTTACAGGACTCAGAACGACTGGTTATGCAAATTAAGGCCTGTGGTGGTGTGGTAGAATC GCGTTTTTATCACAACATGCCCCATGTTTTTCCCCTGTTCCATCTGTTGCCAGAAGCGATTGAGGCGAGGGAACAAATTG CAGATTTTGTGCTTTCACAGCTGATTCGTTAA
Upstream 100 bases:
>100_bases CTGCGCCTAAAAGCACAGAATTATCGGAAGTTGGATCTGCTGTGATCTGCACGCCGTTCCCATCGGTGTCCTATTGCGGC ACTGATGTGGAGGACGGGAA
Downstream 100 bases:
>100_bases AATTGTGTAGTTATTCATATTCAGTGAATAGCTAGCAAAAATAGGGGTAAATAACTTTTTTTCTGACTAAATATGCTAAA GGCCTCTGGTGTAAACGCTT
Product: alpha/beta hydrolase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MPSWQASVLNTILSYVARPSISRGKAKLPLNQVRQRLLELDKRWLPWPEKLVTASIPLQHSTLLHYVLLNDTPRLGNLFY IRGGGFCFKTPHAHARLVADISERCRLDTFIPDYRLAPEHPYPAPCDDVLEAYLHLIELKGSDNLVLMGDSAGGNLALSL LLELKKRHLPMPKACVLLSPALDLAITGDTELILGADDPFFTIESLLRLRGAYLAGADPMSERVSPLQGNLADLPPLLVI AGTRELLLQDSERLVMQIKACGGVVESRFYHNMPHVFPLFHLLPEAIEAREQIADFVLSQLIR
Sequences:
>Translated_303_residues MPSWQASVLNTILSYVARPSISRGKAKLPLNQVRQRLLELDKRWLPWPEKLVTASIPLQHSTLLHYVLLNDTPRLGNLFY IRGGGFCFKTPHAHARLVADISERCRLDTFIPDYRLAPEHPYPAPCDDVLEAYLHLIELKGSDNLVLMGDSAGGNLALSL LLELKKRHLPMPKACVLLSPALDLAITGDTELILGADDPFFTIESLLRLRGAYLAGADPMSERVSPLQGNLADLPPLLVI AGTRELLLQDSERLVMQIKACGGVVESRFYHNMPHVFPLFHLLPEAIEAREQIADFVLSQLIR >Mature_302_residues PSWQASVLNTILSYVARPSISRGKAKLPLNQVRQRLLELDKRWLPWPEKLVTASIPLQHSTLLHYVLLNDTPRLGNLFYI RGGGFCFKTPHAHARLVADISERCRLDTFIPDYRLAPEHPYPAPCDDVLEAYLHLIELKGSDNLVLMGDSAGGNLALSLL LELKKRHLPMPKACVLLSPALDLAITGDTELILGADDPFFTIESLLRLRGAYLAGADPMSERVSPLQGNLADLPPLLVIA GTRELLLQDSERLVMQIKACGGVVESRFYHNMPHVFPLFHLLPEAIEAREQIADFVLSQLIR
Specific function: Lactone hydrolase that is required for the degradation of monocyclic monoterpenes such as menthol and carvone. Catalyzes the ring opening of lactones formed during degradation of monocyclic monoterpenes. Can hydrolyze epsilon-caprolactone, the lactone der
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786682, Length=240, Percent_Identity=28.3333333333333, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.83 [H]
Molecular weight: Translated: 33799; Mature: 33668
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSWQASVLNTILSYVARPSISRGKAKLPLNQVRQRLLELDKRWLPWPEKLVTASIPLQH CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEECCCCCH STLLHYVLLNDTPRLGNLFYIRGGGFCFKTPHAHARLVADISERCRLDTFIPDYRLAPEH HHHEEEEEECCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC PYPAPCDDVLEAYLHLIELKGSDNLVLMGDSAGGNLALSLLLELKKRHLPMPKACVLLSP CCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHEEECC ALDLAITGDTELILGADDPFFTIESLLRLRGAYLAGADPMSERVSPLQGNLADLPPLLVI CCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEEE AGTRELLLQDSERLVMQIKACGGVVESRFYHNMPHVFPLFHLLPEAIEAREQIADFVLSQ ECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIR HCC >Mature Secondary Structure PSWQASVLNTILSYVARPSISRGKAKLPLNQVRQRLLELDKRWLPWPEKLVTASIPLQH CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEECCCCCH STLLHYVLLNDTPRLGNLFYIRGGGFCFKTPHAHARLVADISERCRLDTFIPDYRLAPEH HHHEEEEEECCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC PYPAPCDDVLEAYLHLIELKGSDNLVLMGDSAGGNLALSLLLELKKRHLPMPKACVLLSP CCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHEEECC ALDLAITGDTELILGADDPFFTIESLLRLRGAYLAGADPMSERVSPLQGNLADLPPLLVI CCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEEE AGTRELLLQDSERLVMQIKACGGVVESRFYHNMPHVFPLFHLLPEAIEAREQIADFVLSQ ECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIR HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA