Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918761
Identifier: 117918761
GI number: 117918761
Start: 340714
End: 341220
Strand: Direct
Name: 117918761
Synonym: Shewana3_0304
Alternate gene names: NA
Gene position: 340714-341220 (Clockwise)
Preceding gene: 117918760
Following gene: 117918762
Centisome position: 6.85
GC content: 48.92
Gene sequence:
>507_bases ATGGCTCTACCCGAAGTGATTAATCATCAAGACTTTTTATTAACCCTCAATACCAACGAGGAGCAGATCATCAAAGATGC GCTGCCGGGCGTTGATGTGTACCCGTTATTTTTAGATCCTGAAAACGGTATCTGGGTGATCCGCGCTAAGTTTAAGCCGG GTATTACCTTACCTAAGCATTTCCACACGGGTGTAGTGCATTTCTATACCTTAGCGGGTCGCTGGAACTATCTCGAATAC CCAGACCAACCGCAAACCGCGGGCAGCTACTTGTACGAGCCGGGCGGTTCTATCCATACGTTCCATTGCCCAGCGGATTC CGAAGGTGCCGATGGTGTGATGGTGATTACCGGGGTGAACGTTAACTTCGATGCCGATGGTAACTTTATGTTTATTATGG ATGCAGGTTGGATTGAGCAAGCTGTTGTTGCTGCGGCTAAAGCGCAAGGCTTTACTGCTCGTTACATCAAACCAGGTGCT CAAGCGCGTATGAGCGACGCAGAATAA
Upstream 100 bases:
>100_bases GCACAGTGAACGCCTCCGACGGCTTTGAAAACTTTAAATATCCACTGCTGGGGTAGTGGAAGCTTGACCCGACACAATAA CAACAATGAGGAATGCAAAC
Downstream 100 bases:
>100_bases GGATTTGGCTATGAGCATGATGAATGCCCAAACCATGAAGGCAATCGTGATGCAGGACGGCGAAGTCACCCTGCAGCAAG TCGATTTACCTAAACCACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MALPEVINHQDFLLTLNTNEEQIIKDALPGVDVYPLFLDPENGIWVIRAKFKPGITLPKHFHTGVVHFYTLAGRWNYLEY PDQPQTAGSYLYEPGGSIHTFHCPADSEGADGVMVITGVNVNFDADGNFMFIMDAGWIEQAVVAAAKAQGFTARYIKPGA QARMSDAE
Sequences:
>Translated_168_residues MALPEVINHQDFLLTLNTNEEQIIKDALPGVDVYPLFLDPENGIWVIRAKFKPGITLPKHFHTGVVHFYTLAGRWNYLEY PDQPQTAGSYLYEPGGSIHTFHCPADSEGADGVMVITGVNVNFDADGNFMFIMDAGWIEQAVVAAAKAQGFTARYIKPGA QARMSDAE >Mature_167_residues ALPEVINHQDFLLTLNTNEEQIIKDALPGVDVYPLFLDPENGIWVIRAKFKPGITLPKHFHTGVVHFYTLAGRWNYLEYP DQPQTAGSYLYEPGGSIHTFHCPADSEGADGVMVITGVNVNFDADGNFMFIMDAGWIEQAVVAAAKAQGFTARYIKPGAQ ARMSDAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18545; Mature: 18414
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPEVINHQDFLLTLNTNEEQIIKDALPGVDVYPLFLDPENGIWVIRAKFKPGITLPKH CCCCHHCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCC FHTGVVHFYTLAGRWNYLEYPDQPQTAGSYLYEPGGSIHTFHCPADSEGADGVMVITGVN CCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECE VNFDADGNFMFIMDAGWIEQAVVAAAKAQGFTARYIKPGAQARMSDAE EEECCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure ALPEVINHQDFLLTLNTNEEQIIKDALPGVDVYPLFLDPENGIWVIRAKFKPGITLPKH CCCHHCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCC FHTGVVHFYTLAGRWNYLEYPDQPQTAGSYLYEPGGSIHTFHCPADSEGADGVMVITGVN CCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECE VNFDADGNFMFIMDAGWIEQAVVAAAKAQGFTARYIKPGAQARMSDAE EEECCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA