Definition Borrelia afzelii PKo plasmid lp28, complete sequence.
Accession NC_008568
Length 28,533

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The map label for this gene is 117621811

Identifier: 117621811

GI number: 117621811

Start: 11681

End: 11857

Strand: Direct

Name: 117621811

Synonym: BAPKO_4511

Alternate gene names: NA

Gene position: 11681-11857 (Clockwise)

Preceding gene: 117621809

Following gene: 117621812

Centisome position: 40.94

GC content: 21.47

Gene sequence:

>177_bases
TTGAATATATTTGATCCAATATTAAGTTCATTGGCTGTTGTAATTAATGCTTTTATTGTAGATTTTGATACTTTACTTGG
TAAAGTATTTTTTATAAGAACTGTTACTATGTGTGGCATAAATGTTAATTTTAAAAATTGTGTAATTTTATCTCTTTTAA
TAAGAAAGGTTTATTAA

Upstream 100 bases:

>100_bases
CTAGAGCATTTAATAGCAATAAAGATCTTTCTAAATTTAATAAAAATAAAATAGAAGATTTTTTTTAAACAGTATAGCCA
AAGAACGAAATAATACTTTT

Downstream 100 bases:

>100_bases
TTTTTGGAATCCAGCTTAAATGATTTAAAGTTAATATTAAATTTAAAGGAGAGAAAGCATGAAAATTAAAAGTAAATGCT
TAGCTTTGGGATTGCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MNIFDPILSSLAVVINAFIVDFDTLLGKVFFIRTVTMCGINVNFKNCVILSLLIRKVY

Sequences:

>Translated_58_residues
MNIFDPILSSLAVVINAFIVDFDTLLGKVFFIRTVTMCGINVNFKNCVILSLLIRKVY
>Mature_58_residues
MNIFDPILSSLAVVINAFIVDFDTLLGKVFFIRTVTMCGINVNFKNCVILSLLIRKVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6554; Mature: 6554

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFDPILSSLAVVINAFIVDFDTLLGKVFFIRTVTMCGINVNFKNCVILSLLIRKVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIFDPILSSLAVVINAFIVDFDTLLGKVFFIRTVTMCGINVNFKNCVILSLLIRKVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA