Definition | Borrelia afzelii PKo plasmid lp28, complete sequence. |
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Accession | NC_008568 |
Length | 28,533 |
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The map label for this gene is 117621803
Identifier: 117621803
GI number: 117621803
Start: 1661
End: 2401
Strand: Reverse
Name: 117621803
Synonym: BAPKO_4503
Alternate gene names: NA
Gene position: 2401-1661 (Counterclockwise)
Preceding gene: 117621806
Following gene: 117621802
Centisome position: 8.41
GC content: 28.61
Gene sequence:
>741_bases ATGAAAAAAATAGCATTTCATATTCAAAAAGGTGGCGTTGGAAAAACTACCTTAAGTGGGAATATAGCAAGCTATTTGTC TAAAACAAAAAAAGTTATATTAGTTGATTGTGATATACAGCAAGGAAGTTCTTCTACATGGTTTCTTAATCATGAAATTC TTAGGTTAGACATTAAGGATTCTCTTTTAAATAAGATAAATATAGATCAAGTATTAAAGCAAATACAAAAAAATTTTTAT ATTTTGCCATGTGTGCCGAGCGGAACTTTTAGAAGAGATGTTCAGCATAAATTACAGGATTTTCCATATTTGATAGATGA TTTTTGCTTAGAATTGGAAAAATTGGGATTTGAATTTGCGATTTTTGATTTATCTCCCAGTTTTGAGCTTTGGGAGCGAA GAATTATTCTTGCAATGTGTGAAGTTATTACTCCATTGACTCCAGAATTTTTAAGTCTTGAAGGAATTAATATTTTTAAG GAAGAGTTTGATTCTTTGTTAAAATCTTATAGAAAAAAGGTTAAACACGAGAAGATTATTTGTAATATGCTCAATAAAAG TTTTAAAAGACATAATTTACATTTAAGTCAATTTAAAACTTTTGGATATGATCTTTATGAGATTGGGCAAGATGCTAAAA TAGCAGAATCGCAGTTGTATAAAAAGTCGATTTTTGATTATTATCCTGAGAGTAAATCTATCTTAGAACTTTCAAGATTG GGGGATGCTTTATGCCTATAA
Upstream 100 bases:
>100_bases TTAATATGTGATATAAAGTAATTAATATGTGATATAAAGTAATTAATATGTGATATAAAGTAATTAATATGTGATATAAT ATAATTAAAAGGAAGTTTAC
Downstream 100 bases:
>100_bases GTAAAGAGGTTGATTTGGAAGAAATCATTAAACAAAATGTTGGTAAATCTAAATTTGCTTTTCGTGTTGACAATGATGTT ATTAGTAATAACACATCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MKKIAFHIQKGGVGKTTLSGNIASYLSKTKKVILVDCDIQQGSSSTWFLNHEILRLDIKDSLLNKINIDQVLKQIQKNFY ILPCVPSGTFRRDVQHKLQDFPYLIDDFCLELEKLGFEFAIFDLSPSFELWERRIILAMCEVITPLTPEFLSLEGINIFK EEFDSLLKSYRKKVKHEKIICNMLNKSFKRHNLHLSQFKTFGYDLYEIGQDAKIAESQLYKKSIFDYYPESKSILELSRL GDALCL
Sequences:
>Translated_246_residues MKKIAFHIQKGGVGKTTLSGNIASYLSKTKKVILVDCDIQQGSSSTWFLNHEILRLDIKDSLLNKINIDQVLKQIQKNFY ILPCVPSGTFRRDVQHKLQDFPYLIDDFCLELEKLGFEFAIFDLSPSFELWERRIILAMCEVITPLTPEFLSLEGINIFK EEFDSLLKSYRKKVKHEKIICNMLNKSFKRHNLHLSQFKTFGYDLYEIGQDAKIAESQLYKKSIFDYYPESKSILELSRL GDALCL >Mature_246_residues MKKIAFHIQKGGVGKTTLSGNIASYLSKTKKVILVDCDIQQGSSSTWFLNHEILRLDIKDSLLNKINIDQVLKQIQKNFY ILPCVPSGTFRRDVQHKLQDFPYLIDDFCLELEKLGFEFAIFDLSPSFELWERRIILAMCEVITPLTPEFLSLEGINIFK EEFDSLLKSYRKKVKHEKIICNMLNKSFKRHNLHLSQFKTFGYDLYEIGQDAKIAESQLYKKSIFDYYPESKSILELSRL GDALCL
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 28606; Mature: 28606
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIAFHIQKGGVGKTTLSGNIASYLSKTKKVILVDCDIQQGSSSTWFLNHEILRLDIKD CCCEEEEEECCCCCCCEECCHHHHHHHHCCEEEEEEECCCCCCCCEEEECCEEEEEEHHH SLLNKINIDQVLKQIQKNFYILPCVPSGTFRRDVQHKLQDFPYLIDDFCLELEKLGFEFA HHHHCCCHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEE IFDLSPSFELWERRIILAMCEVITPLTPEFLSLEGINIFKEEFDSLLKSYRKKVKHEKII EEECCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CNMLNKSFKRHNLHLSQFKTFGYDLYEIGQDAKIAESQLYKKSIFDYYPESKSILELSRL HHHHHHHHHHCCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH GDALCL HHHHCC >Mature Secondary Structure MKKIAFHIQKGGVGKTTLSGNIASYLSKTKKVILVDCDIQQGSSSTWFLNHEILRLDIKD CCCEEEEEECCCCCCCEECCHHHHHHHHCCEEEEEEECCCCCCCCEEEECCEEEEEEHHH SLLNKINIDQVLKQIQKNFYILPCVPSGTFRRDVQHKLQDFPYLIDDFCLELEKLGFEFA HHHHCCCHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEE IFDLSPSFELWERRIILAMCEVITPLTPEFLSLEGINIFKEEFDSLLKSYRKKVKHEKII EEECCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CNMLNKSFKRHNLHLSQFKTFGYDLYEIGQDAKIAESQLYKKSIFDYYPESKSILELSRL HHHHHHHHHHCCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH GDALCL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8932323; 9403685 [H]