Definition | Borrelia afzelii PKo plasmid lp28, complete sequence. |
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Accession | NC_008568 |
Length | 28,533 |
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The map label for this gene is 117621802
Identifier: 117621802
GI number: 117621802
Start: 1398
End: 1670
Strand: Reverse
Name: 117621802
Synonym: BAPKO_4502
Alternate gene names: NA
Gene position: 1670-1398 (Counterclockwise)
Preceding gene: 117621803
Following gene: 117621801
Centisome position: 5.85
GC content: 26.74
Gene sequence:
>273_bases ATGCCTATAAGTAAAGAGGTTGATTTGGAAGAAATCATTAAACAAAATGTTGGTAAATCTAAATTTGCTTTTCGTGTTGA CAATGATGTTATTAGTAATAACACATCAAATGTTAAGCCTGGTAGATCAAAGATGACGATCAAACAAATAAGTATAGGAT TGAAATATGAATATTGGGTTGAGTTTTATTCTATTTTAGATAAAAAGGGATTAACAGCTTCTGGTTTTATAAGAACTTTA ATTATGGAATATATAGAAACTTCTAAGAAATAA
Upstream 100 bases:
>100_bases ATGCTAAAATAGCAGAATCGCAGTTGTATAAAAAGTCGATTTTTGATTATTATCCTGAGAGTAAATCTATCTTAGAACTT TCAAGATTGGGGGATGCTTT
Downstream 100 bases:
>100_bases TATTTTTTAGTTTTAATTTATTATTTATTAATAGATGGATTTATTTTGATTTTGAATATATTTTTTGATGATATCAATAG AAGCGCTTACAGTAGAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MPISKEVDLEEIIKQNVGKSKFAFRVDNDVISNNTSNVKPGRSKMTIKQISIGLKYEYWVEFYSILDKKGLTASGFIRTL IMEYIETSKK
Sequences:
>Translated_90_residues MPISKEVDLEEIIKQNVGKSKFAFRVDNDVISNNTSNVKPGRSKMTIKQISIGLKYEYWVEFYSILDKKGLTASGFIRTL IMEYIETSKK >Mature_89_residues PISKEVDLEEIIKQNVGKSKFAFRVDNDVISNNTSNVKPGRSKMTIKQISIGLKYEYWVEFYSILDKKGLTASGFIRTLI MEYIETSKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10353; Mature: 10222
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISKEVDLEEIIKQNVGKSKFAFRVDNDVISNNTSNVKPGRSKMTIKQISIGLKYEYWV CCCCCCCCHHHHHHHCCCCCCEEEEECCCHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHH EFYSILDKKGLTASGFIRTLIMEYIETSKK HHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PISKEVDLEEIIKQNVGKSKFAFRVDNDVISNNTSNVKPGRSKMTIKQISIGLKYEYWV CCCCCCCHHHHHHHCCCCCCEEEEECCCHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHH EFYSILDKKGLTASGFIRTLIMEYIETSKK HHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8932323; 9403685 [H]