Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621656

Identifier: 117621656

GI number: 117621656

Start: 11397

End: 11627

Strand: Reverse

Name: 117621656

Synonym: BAPKO_2509

Alternate gene names: NA

Gene position: 11627-11397 (Counterclockwise)

Preceding gene: 117621657

Following gene: 117621655

Centisome position: 19.44

GC content: 23.38

Gene sequence:

>231_bases
TTGATAACTTTAGTTATATTCATAAAGCTTGAGGCTATAAATTATCTTATAGATTGTTATCTACATCAAAATTTTGATTA
TTTAATAAAATTAGGCTTGTATAAAATTGATTACGCTGATAAATATGGAGAAAAGGCTAGAAATAGATTTGAACAATCTT
ATTCTAGAAATAAAGTATTTACAGTCAAACAAATATTAAAACAAACTTTGGTCGATTTACCTAAAGATTAG

Upstream 100 bases:

>100_bases
TATGCTCCATAAATTAGAGGTTGTTTAAAAAAATTAGGATTAAGGAAAAAAGTGGTTTTTATATGTTCGTGATGTCATGG
AGTGTGTTATACAAAATAAA

Downstream 100 bases:

>100_bases
ACTTTTAAGGTTAAAAAAGCAATCTTAGAACATATTATGAGTATTAAGAATAGCTAAAAAAGATTTATAAATAACATAAA
TGGGTTTTATAGGCATTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: BapA Protein

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MITLVIFIKLEAINYLIDCYLHQNFDYLIKLGLYKIDYADKYGEKARNRFEQSYSRNKVFTVKQILKQTLVDLPKD

Sequences:

>Translated_76_residues
MITLVIFIKLEAINYLIDCYLHQNFDYLIKLGLYKIDYADKYGEKARNRFEQSYSRNKVFTVKQILKQTLVDLPKD
>Mature_76_residues
MITLVIFIKLEAINYLIDCYLHQNFDYLIKLGLYKIDYADKYGEKARNRFEQSYSRNKVFTVKQILKQTLVDLPKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9125; Mature: 9125

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLVIFIKLEAINYLIDCYLHQNFDYLIKLGLYKIDYADKYGEKARNRFEQSYSRNKVF
CEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHCCCEECCHHHHHHHHHHHHHHHHCCCCCH
TVKQILKQTLVDLPKD
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MITLVIFIKLEAINYLIDCYLHQNFDYLIKLGLYKIDYADKYGEKARNRFEQSYSRNKVF
CEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHCCCEECCHHHHHHHHHHHHHHHHCCCCCH
TVKQILKQTLVDLPKD
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA