Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

Click here to switch to the map view.

The map label for this gene is 117621657

Identifier: 117621657

GI number: 117621657

Start: 11700

End: 11903

Strand: Reverse

Name: 117621657

Synonym: BAPKO_2510

Alternate gene names: NA

Gene position: 11903-11700 (Counterclockwise)

Preceding gene: 117621658

Following gene: 117621656

Centisome position: 19.9

GC content: 23.04

Gene sequence:

>204_bases
ATGAACAAAAAAATGTTTACTATTTATACTTTTTTTGTACCGATAAGTTTTTACAAGAATTTTTTATATCTTTGCTATTT
ACGTAATTCTGAACAAGATTCTTCTAAAGAAAAAATTAACAAAAGATTAGATAATTATAATTTTGAAAATGAAAAGGATA
GAAGCCCTTTTTTGCCTATGCTCCATAAATTAGAGGTTGTTTAA

Upstream 100 bases:

>100_bases
AGTAAATATTTAGGATTATTGGGGGGCCCCCCTCGCTACTTGTTGAAAAGTTGTAAATCAATAACTTTGGTTTATTTTTT
AATTTTAGGAGAGGATAATT

Downstream 100 bases:

>100_bases
AAAAATTAGGATTAAGGAAAAAAGTGGTTTTTATATGTTCGTGATGTCATGGAGTGTGTTATACAAAATAAATTGATAAC
TTTAGTTATATTCATAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MNKKMFTIYTFFVPISFYKNFLYLCYLRNSEQDSSKEKINKRLDNYNFENEKDRSPFLPMLHKLEVV

Sequences:

>Translated_67_residues
MNKKMFTIYTFFVPISFYKNFLYLCYLRNSEQDSSKEKINKRLDNYNFENEKDRSPFLPMLHKLEVV
>Mature_67_residues
MNKKMFTIYTFFVPISFYKNFLYLCYLRNSEQDSSKEKINKRLDNYNFENEKDRSPFLPMLHKLEVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8268; Mature: 8268

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKMFTIYTFFVPISFYKNFLYLCYLRNSEQDSSKEKINKRLDNYNFENEKDRSPFLPM
CCCCEEEHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHH
LHKLEVV
HHHHCCC
>Mature Secondary Structure
MNKKMFTIYTFFVPISFYKNFLYLCYLRNSEQDSSKEKINKRLDNYNFENEKDRSPFLPM
CCCCEEEHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHH
LHKLEVV
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA