Click here to switch to the map view.

The map label for this gene is ycgQ [H]

Identifier: 116872318

GI number: 116872318

Start: 930782

End: 931621

Strand: Direct

Name: ycgQ [H]

Synonym: lwe0900

Alternate gene names: 116872318

Gene position: 930782-931621 (Clockwise)

Preceding gene: 116872317

Following gene: 116872319

Centisome position: 33.08

GC content: 32.26

Gene sequence:

>840_bases
ATGTTTCGAGTTTTTATATTATTTGGATTTGGCTTTTATTTAATGCAGCTACATATTTCTGGTGATATCAGTAAATATAT
TAATATGAAATACGCTTATTTATCTTTTTCCGCGATGATTGCTGCATTTTTACTTGCACTTATTCAACTAGTTATGGTTT
TTCGCGATGAAGATATTGGTGCAAAGACAGAGCATATGGGGCATACCCATGATGGCGAAAATACTATTTTGAAAAAAATA
ATGGTGTATGGTTTACTTTCCTACGCTCTAATCGCTGGTTTCTTATTTCCTGTTGCAACGCTTGATTCAACCATTGTTTC
CGCTAAAGGTTTTCATTTCCCGAAAAACAACGCTGCTGGAGATGATCCATATGCTCAAAATCAATTTTTAAGACCAGATA
CAAGTGGTTATTTTGGAGAAACAGATTATGAAAAAATGATGTCGAAAGAAAAAGCCGCTATCATTGACCAAAACCCAATC
AAAGTTAATGATAGTAATTATTTAATGACGATGGAAATTTTGTATAATTATCCAGGAGAATTTACAGGCAAACAAATCGA
ATTTACAGGATTTGTTTATAATGATGAAGTGACAAAAGATAATAATTTATTCTTGTTCCGTTTTGGAATTATTCACTGTG
TGGCAGATTCTGGTGTATTCGGTATGCTTGTTCAAATGCCTGAAAAAACCGATTTAAAAAATGATACTTGGCTCACAGTA
AAAGGAACCATTACTCAAGAATATTATTCTCCGTTCAAAATGAATATTCCGTCTGTACAAGTAGAAAGCTATAAAGAAGT
AGCAAAACCAAAATCAGTTTATGTCTATCGTAAATATTAA

Upstream 100 bases:

>100_bases
AGGTGCATTTAAAGCGAAATTTGTCTTATTAATTGTTACTAGTGTAACGATTGTCGTCTTTTTATACGCTTTAGTTATCT
AACCGAAAGCAGGTGATTAC

Downstream 100 bases:

>100_bases
ATCGCTACTTGCGGATTTATGCAGCTTGCGTTATCCTTAAATAAAGCTGTTTACGTTTTCACGAATGAATAAAAGGATGG
AACATTGAATGAATGATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MFRVFILFGFGFYLMQLHISGDISKYINMKYAYLSFSAMIAAFLLALIQLVMVFRDEDIGAKTEHMGHTHDGENTILKKI
MVYGLLSYALIAGFLFPVATLDSTIVSAKGFHFPKNNAAGDDPYAQNQFLRPDTSGYFGETDYEKMMSKEKAAIIDQNPI
KVNDSNYLMTMEILYNYPGEFTGKQIEFTGFVYNDEVTKDNNLFLFRFGIIHCVADSGVFGMLVQMPEKTDLKNDTWLTV
KGTITQEYYSPFKMNIPSVQVESYKEVAKPKSVYVYRKY

Sequences:

>Translated_279_residues
MFRVFILFGFGFYLMQLHISGDISKYINMKYAYLSFSAMIAAFLLALIQLVMVFRDEDIGAKTEHMGHTHDGENTILKKI
MVYGLLSYALIAGFLFPVATLDSTIVSAKGFHFPKNNAAGDDPYAQNQFLRPDTSGYFGETDYEKMMSKEKAAIIDQNPI
KVNDSNYLMTMEILYNYPGEFTGKQIEFTGFVYNDEVTKDNNLFLFRFGIIHCVADSGVFGMLVQMPEKTDLKNDTWLTV
KGTITQEYYSPFKMNIPSVQVESYKEVAKPKSVYVYRKY
>Mature_279_residues
MFRVFILFGFGFYLMQLHISGDISKYINMKYAYLSFSAMIAAFLLALIQLVMVFRDEDIGAKTEHMGHTHDGENTILKKI
MVYGLLSYALIAGFLFPVATLDSTIVSAKGFHFPKNNAAGDDPYAQNQFLRPDTSGYFGETDYEKMMSKEKAAIIDQNPI
KVNDSNYLMTMEILYNYPGEFTGKQIEFTGFVYNDEVTKDNNLFLFRFGIIHCVADSGVFGMLVQMPEKTDLKNDTWLTV
KGTITQEYYSPFKMNIPSVQVESYKEVAKPKSVYVYRKY

Specific function: Unknown

COG id: COG3689

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0703 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015402 [H]

Pfam domain/function: PF09323 DUF1980 [H]

EC number: NA

Molecular weight: Translated: 31902; Mature: 31902

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRVFILFGFGFYLMQLHISGDISKYINMKYAYLSFSAMIAAFLLALIQLVMVFRDEDIG
CEEEEEEHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AKTEHMGHTHDGENTILKKIMVYGLLSYALIAGFLFPVATLDSTIVSAKGFHFPKNNAAG
CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DDPYAQNQFLRPDTSGYFGETDYEKMMSKEKAAIIDQNPIKVNDSNYLMTMEILYNYPGE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCEEECCCCEEEEEEEEECCCCC
FTGKQIEFTGFVYNDEVTKDNNLFLFRFGIIHCVADSGVFGMLVQMPEKTDLKNDTWLTV
CCCCEEEEEEEEEECCCCCCCCEEEEEEHEEHHHHCCCHHHHEEECCCCCCCCCCCEEEE
KGTITQEYYSPFKMNIPSVQVESYKEVAKPKSVYVYRKY
EEEEEHHHCCCEECCCCCEEHHHHHHHCCCCEEEEEEEC
>Mature Secondary Structure
MFRVFILFGFGFYLMQLHISGDISKYINMKYAYLSFSAMIAAFLLALIQLVMVFRDEDIG
CEEEEEEHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AKTEHMGHTHDGENTILKKIMVYGLLSYALIAGFLFPVATLDSTIVSAKGFHFPKNNAAG
CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DDPYAQNQFLRPDTSGYFGETDYEKMMSKEKAAIIDQNPIKVNDSNYLMTMEILYNYPGE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCEEECCCCEEEEEEEEECCCCC
FTGKQIEFTGFVYNDEVTKDNNLFLFRFGIIHCVADSGVFGMLVQMPEKTDLKNDTWLTV
CCCCEEEEEEEEEECCCCCCCCEEEEEEHEEHHHHCCCHHHHEEECCCCCCCCCCCEEEE
KGTITQEYYSPFKMNIPSVQVESYKEVAKPKSVYVYRKY
EEEEEHHHCCCEECCCCCEEHHHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]