| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872276
Identifier: 116872276
GI number: 116872276
Start: 889488
End: 890402
Strand: Direct
Name: 116872276
Synonym: lwe0856
Alternate gene names: NA
Gene position: 889488-890402 (Clockwise)
Preceding gene: 116872275
Following gene: 116872277
Centisome position: 31.61
GC content: 40.0
Gene sequence:
>915_bases ATGAAATCAATAGAAACTTTATTGCAAACATTTCGCGAACATACGATAGCGAACGGGACACGTATTCAGTTAAATGGTGC TGGGGAAAAAGATGTATATAACATTACCGCACCTTTTACTTGGCTCGGCAAAGAATATATTGCAGGACGAGTGGAATCTC GAGATAGTGAACTTTCAGAAGTGCGATTTTTTGAGAATGTAACAATTGATACGTACCAATTAGTCGAGAATTCCACAGTG TTATCCCTCCAAGACCCGTTTGTAACCTTTGTGCAAGGGGAGCTTATTATTGGCGGTGTGGAGGTTTTTCCAAAAGAATC TGACCCGGCAAAATTAGATTGGAGAACCAATTTATATCGTGCGACCTCTCTTACTGACTTCGAACAAATACTTGTTGGTC CAATCGGAATGAAAGATTTACGCATCAAAGAGTTGCCGGATGGACGTATTCTAGTATTAACAAGGCCTCAAGGGGAAAAA GGAGGACGCGGGAAAATTGGTGCAATCGTCATCCATTCATTAGCCGATTTAACTTTAGAGAAAATAGAAACAGCACCTCT TCTGAAACGAAATTTTTCAGGGGATGAATGGGGTGGCGGAAACGAAATTCATTTGTTAGACGAAGGTAGAGTAGGAGTTC TCGGCCATATTGCTTGTTTTGATGAAGCTTCCGACCGTCATTATTACGCCTTTGCTTTTCAACTAAATGAAGACTTTACG CAAATTGAGCAAGAAAAAATAATAGCTGAACGTGCGAATTTTGCTCCAAGTGAACCGAAAAGACCAGATTTAGCAGATGT TGTCTTTAGCGGCGGTTTAATCAGAAATTCAGACGGAACGGCTACGCTTTATGCAGGGATTGGCGATTCAGATGCACAAA AAATAACTATTTTAGATCCATTTAAAAATAACTAA
Upstream 100 bases:
>100_bases TCAGGTCAAAAGCAACTTGTTTTTGGGGAGGCTGATATGTTAGAAACTGGTATTAGATTGGGTGCTTACACAGGGATTGC GCTCAGAGTGGAGGATTAAA
Downstream 100 bases:
>100_bases TAGTAGGAGTTTTGACTAAAAATGAACATTTATCGTTATGAAGAAAATCCATTAATTACACCGCTTGACGTAAAACCAAT ACATGAAGGATTTGAAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKSIETLLQTFREHTIANGTRIQLNGAGEKDVYNITAPFTWLGKEYIAGRVESRDSELSEVRFFENVTIDTYQLVENSTV LSLQDPFVTFVQGELIIGGVEVFPKESDPAKLDWRTNLYRATSLTDFEQILVGPIGMKDLRIKELPDGRILVLTRPQGEK GGRGKIGAIVIHSLADLTLEKIETAPLLKRNFSGDEWGGGNEIHLLDEGRVGVLGHIACFDEASDRHYYAFAFQLNEDFT QIEQEKIIAERANFAPSEPKRPDLADVVFSGGLIRNSDGTATLYAGIGDSDAQKITILDPFKNN
Sequences:
>Translated_304_residues MKSIETLLQTFREHTIANGTRIQLNGAGEKDVYNITAPFTWLGKEYIAGRVESRDSELSEVRFFENVTIDTYQLVENSTV LSLQDPFVTFVQGELIIGGVEVFPKESDPAKLDWRTNLYRATSLTDFEQILVGPIGMKDLRIKELPDGRILVLTRPQGEK GGRGKIGAIVIHSLADLTLEKIETAPLLKRNFSGDEWGGGNEIHLLDEGRVGVLGHIACFDEASDRHYYAFAFQLNEDFT QIEQEKIIAERANFAPSEPKRPDLADVVFSGGLIRNSDGTATLYAGIGDSDAQKITILDPFKNN >Mature_304_residues MKSIETLLQTFREHTIANGTRIQLNGAGEKDVYNITAPFTWLGKEYIAGRVESRDSELSEVRFFENVTIDTYQLVENSTV LSLQDPFVTFVQGELIIGGVEVFPKESDPAKLDWRTNLYRATSLTDFEQILVGPIGMKDLRIKELPDGRILVLTRPQGEK GGRGKIGAIVIHSLADLTLEKIETAPLLKRNFSGDEWGGGNEIHLLDEGRVGVLGHIACFDEASDRHYYAFAFQLNEDFT QIEQEKIIAERANFAPSEPKRPDLADVVFSGGLIRNSDGTATLYAGIGDSDAQKITILDPFKNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33792; Mature: 33792
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIETLLQTFREHTIANGTRIQLNGAGEKDVYNITAPFTWLGKEYIAGRVESRDSELSE CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCHHHHCHHHHHCCCCCCCCHHHH VRFFENVTIDTYQLVENSTVLSLQDPFVTFVQGELIIGGVEVFPKESDPAKLDWRTNLYR HHHHHCCCEEEEEEECCCEEEEECCCEEEEEECEEEEEEEEEECCCCCCCEEEEECCEEE ATSLTDFEQILVGPIGMKDLRIKELPDGRILVLTRPQGEKGGRGKIGAIVIHSLADLTLE ECCCCCHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCHHHEEHHHHHHHHH KIETAPLLKRNFSGDEWGGGNEIHLLDEGRVGVLGHIACFDEASDRHYYAFAFQLNEDFT HHCCCHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCEEEEEEEEECCCHH QIEQEKIIAERANFAPSEPKRPDLADVVFSGGLIRNSDGTATLYAGIGDSDAQKITILDP HHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEECCCCCEEEEEECCCCCCCEEEEECC FKNN CCCC >Mature Secondary Structure MKSIETLLQTFREHTIANGTRIQLNGAGEKDVYNITAPFTWLGKEYIAGRVESRDSELSE CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCHHHHCHHHHHCCCCCCCCHHHH VRFFENVTIDTYQLVENSTVLSLQDPFVTFVQGELIIGGVEVFPKESDPAKLDWRTNLYR HHHHHCCCEEEEEEECCCEEEEECCCEEEEEECEEEEEEEEEECCCCCCCEEEEECCEEE ATSLTDFEQILVGPIGMKDLRIKELPDGRILVLTRPQGEKGGRGKIGAIVIHSLADLTLE ECCCCCHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCHHHEEHHHHHHHHH KIETAPLLKRNFSGDEWGGGNEIHLLDEGRVGVLGHIACFDEASDRHYYAFAFQLNEDFT HHCCCHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCEEEEEEEEECCCHH QIEQEKIIAERANFAPSEPKRPDLADVVFSGGLIRNSDGTATLYAGIGDSDAQKITILDP HHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEECCCCCEEEEEECCCCCCCEEEEECC FKNN CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA