| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872277
Identifier: 116872277
GI number: 116872277
Start: 890424
End: 891491
Strand: Direct
Name: 116872277
Synonym: lwe0857
Alternate gene names: NA
Gene position: 890424-891491 (Clockwise)
Preceding gene: 116872276
Following gene: 116872278
Centisome position: 31.64
GC content: 36.99
Gene sequence:
>1068_bases ATGAACATTTATCGTTATGAAGAAAATCCATTAATTACACCGCTTGACGTAAAACCAATACATGAAGGATTTGAAGTGAT TGGTGCGTTTAACGGAGGTGTTGCTGAGTATAATGGAGAAGTACTTTTACTTCTTCGTGTGGCAGAAAAACCTATAAGTG AGGATCCAGAAGTGGTACTTGCTCCAGTTTATAATGCAGAAAGTAAAGTATTAGAACTCAAACAATTTCGATTAGATGAT GAAAATTATGATTTTGAAGATCCGCGAATGATTCGTAATAAAGCAAAATTAGAAGGGTTTTCGTATTTGACTTCCCTTTC TTATATTCGAATTGCACGTAGTAAAGATGGGCGCCATTTTACTTTAGATGAAAAACCATTTTTATATCCGTTTAATGAAT ATCAAACATTTGGGATTGAAGATGCTCGTGTAACGCAAATTGGTGATACATATCATGTGAATTTCAGTGCGGTTTCTGAG TTTGGTGTAGCAGACGCGTTAGTCACAACAAAAGACTTTGAAAAATTGGAGTATCAAGGAAATATTTTTGCTCCTGAAAA TAAAGATGTGCTTATTTTCCCAGAAAAAATCAATGGAAAATACTATGCACTTCATCGTCCGAGTTTGAAAAGTATTGGAA ACTTAGATATTTGGATTGCCTCTTCACCAGATTTGCGCAGTTTTGGAGATCATCGTCATTTGCTAGGTATTCGTCCGGGT GAATATGATAATGGCCGAGTAGGCGGCGGTTGTGTACCAATTAAAACAGAAGAAGGCTGGCTGGTTTTATATCACGGAGC AACAGTAGAAAACCGTTACGTAATGGGTGCAGCTTTACTTGATTTAAACGACCCAACGATTGTGTTAAAAAGAACGAAAA CCCCTATTTTAGAACCAGAGGCTGATTATGAAAAAAATGGCTTCTTTGGTGATGTGGTTTTTGCTTGTGGAGCAATTCAA GAAGGGGACACGTTGCATATGTATTATGGCGTGGCAGATACTTCCATGGCGGGTTGTGATATGAAAATCAGCGAAATTTT ACATCAGTTAGAAGTGGAAAATAAATGA
Upstream 100 bases:
>100_bases AACGGCTACGCTTTATGCAGGGATTGGCGATTCAGATGCACAAAAAATAACTATTTTAGATCCATTTAAAAATAACTAAT AGTAGGAGTTTTGACTAAAA
Downstream 100 bases:
>100_bases CTTGGCAAAACAATCTAAAAGCATGGCAAAATGCTGATCTACCCAAAAAGTGGCAAAACGAATTAAATCAAGTAGCAAAT GAAAGAGAGCGATTTGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosidase Related Protein; Glycosylase; Glycosidase-Like Protein; Glycosidase-Related; Conserved Domain Protein; Glycosidase-Related Protein; Cytoplasmic Protein; Glycosylase-Like Protein; Unknwon Conserved Protein
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MNIYRYEENPLITPLDVKPIHEGFEVIGAFNGGVAEYNGEVLLLLRVAEKPISEDPEVVLAPVYNAESKVLELKQFRLDD ENYDFEDPRMIRNKAKLEGFSYLTSLSYIRIARSKDGRHFTLDEKPFLYPFNEYQTFGIEDARVTQIGDTYHVNFSAVSE FGVADALVTTKDFEKLEYQGNIFAPENKDVLIFPEKINGKYYALHRPSLKSIGNLDIWIASSPDLRSFGDHRHLLGIRPG EYDNGRVGGGCVPIKTEEGWLVLYHGATVENRYVMGAALLDLNDPTIVLKRTKTPILEPEADYEKNGFFGDVVFACGAIQ EGDTLHMYYGVADTSMAGCDMKISEILHQLEVENK
Sequences:
>Translated_355_residues MNIYRYEENPLITPLDVKPIHEGFEVIGAFNGGVAEYNGEVLLLLRVAEKPISEDPEVVLAPVYNAESKVLELKQFRLDD ENYDFEDPRMIRNKAKLEGFSYLTSLSYIRIARSKDGRHFTLDEKPFLYPFNEYQTFGIEDARVTQIGDTYHVNFSAVSE FGVADALVTTKDFEKLEYQGNIFAPENKDVLIFPEKINGKYYALHRPSLKSIGNLDIWIASSPDLRSFGDHRHLLGIRPG EYDNGRVGGGCVPIKTEEGWLVLYHGATVENRYVMGAALLDLNDPTIVLKRTKTPILEPEADYEKNGFFGDVVFACGAIQ EGDTLHMYYGVADTSMAGCDMKISEILHQLEVENK >Mature_355_residues MNIYRYEENPLITPLDVKPIHEGFEVIGAFNGGVAEYNGEVLLLLRVAEKPISEDPEVVLAPVYNAESKVLELKQFRLDD ENYDFEDPRMIRNKAKLEGFSYLTSLSYIRIARSKDGRHFTLDEKPFLYPFNEYQTFGIEDARVTQIGDTYHVNFSAVSE FGVADALVTTKDFEKLEYQGNIFAPENKDVLIFPEKINGKYYALHRPSLKSIGNLDIWIASSPDLRSFGDHRHLLGIRPG EYDNGRVGGGCVPIKTEEGWLVLYHGATVENRYVMGAALLDLNDPTIVLKRTKTPILEPEADYEKNGFFGDVVFACGAIQ EGDTLHMYYGVADTSMAGCDMKISEILHQLEVENK
Specific function: Unknown
COG id: COG2152
COG function: function code G; Predicted glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40097; Mature: 40097
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIYRYEENPLITPLDVKPIHEGFEVIGAFNGGVAEYNGEVLLLLRVAEKPISEDPEVVL CCEEEECCCCEEECCCCCHHHCCEEEEEECCCCEEEECCCEEEEEEECCCCCCCCCCEEE APVYNAESKVLELKQFRLDDENYDFEDPRMIRNKAKLEGFSYLTSLSYIRIARSKDGRHF EEEECCCHHHEEEHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHEEEEEEEECCCCCEE TLDEKPFLYPFNEYQTFGIEDARVTQIGDTYHVNFSAVSEFGVADALVTTKDFEKLEYQG EECCCCEEEECCCCEECCCCCCEEEECCCEEEEEHHHHHHCCCHHEEEECCCHHHHEECC NIFAPENKDVLIFPEKINGKYYALHRPSLKSIGNLDIWIASSPDLRSFGDHRHLLGIRPG CEECCCCCCEEEEEECCCCEEEEEECCCHHHCCCEEEEEECCCCHHHCCCCCEEEECCCC EYDNGRVGGGCVPIKTEEGWLVLYHGATVENRYVMGAALLDLNDPTIVLKRTKTPILEPE CCCCCEECCCEEEEEECCCEEEEEECCEECCEEEEEEEEEECCCCEEEEEECCCCCCCCC ADYEKNGFFGDVVFACGAIQEGDTLHMYYGVADTSMAGCDMKISEILHQLEVENK CCCCCCCCEEEHHHEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MNIYRYEENPLITPLDVKPIHEGFEVIGAFNGGVAEYNGEVLLLLRVAEKPISEDPEVVL CCEEEECCCCEEECCCCCHHHCCEEEEEECCCCEEEECCCEEEEEEECCCCCCCCCCEEE APVYNAESKVLELKQFRLDDENYDFEDPRMIRNKAKLEGFSYLTSLSYIRIARSKDGRHF EEEECCCHHHEEEHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHEEEEEEEECCCCCEE TLDEKPFLYPFNEYQTFGIEDARVTQIGDTYHVNFSAVSEFGVADALVTTKDFEKLEYQG EECCCCEEEECCCCEECCCCCCEEEECCCEEEEEHHHHHHCCCHHEEEECCCHHHHEECC NIFAPENKDVLIFPEKINGKYYALHRPSLKSIGNLDIWIASSPDLRSFGDHRHLLGIRPG CEECCCCCCEEEEEECCCCEEEEEECCCHHHCCCEEEEEECCCCHHHCCCCCEEEECCCC EYDNGRVGGGCVPIKTEEGWLVLYHGATVENRYVMGAALLDLNDPTIVLKRTKTPILEPE CCCCCEECCCEEEEEECCCEEEEEECCEECCEEEEEEEEEECCCCEEEEEECCCCCCCCC ADYEKNGFFGDVVFACGAIQEGDTLHMYYGVADTSMAGCDMKISEILHQLEVENK CCCCCCCCEEEHHHEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA