The gene/protein map for NC_008542 is currently unavailable.
Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116690009

Identifier: 116690009

GI number: 116690009

Start: 2204244

End: 2204819

Strand: Direct

Name: 116690009

Synonym: Bcen2424_1988

Alternate gene names: NA

Gene position: 2204244-2204819 (Clockwise)

Preceding gene: 116690008

Following gene: 116690015

Centisome position: 63.27

GC content: 56.94

Gene sequence:

>576_bases
ATGTCTGCCCTCCCGCAGAACCCGATTGCGCCATCCGGAACTACCGATCGCATCACACTGCCCGCCTCGGCAGCAGACAC
CTTGAGCATGCTGGTGCGCTACAAGTCCTGGGCGAACGGACTGACGTTCAAGAGCGTGATGGACCTACCGGCTGGCGAAG
CCCTTCGGCAGAGACCAACGCGGTTCGGAAACATGGTGCATACCTTGAATCATGTCTATGTAGTCGACGACATTTTCAGA
CATCATCTGCAAGGAAAGAAGCACACCTACACCTCGCGCAACACCGACCACACGCCTGCAGTTTCCGATCTCTGGAACGC
GGTTCAGGAAATGGACCGCTGGTACGTCGAGCTTGTCGACAACTGGTCGGACGAGGATCTCGCGACAGCCATTCGTTTCG
AGTTTGTGGGTGGGGGAGAAGGCGTCATGACCCGCGAGCAGATCGTGCTGCATGTCGTCAATCACGCGACCTATCACCGC
GGCTTTGTCGGCGACATGATGTATCAGGTGCCTTTTGTGCCGCCGTCAAATGATCTTCCGGTATTCATCAGGGATCACTA
TCGCGACGCTCGGTGA

Upstream 100 bases:

>100_bases
CCGAGCAGCTTGCGCGCAGGACTACTACCGGTGTGGCACGACGACACCGGATCAACCCGAGCATTGTTCCGACGTTCGAA
ACCACGCAAGGAGTTTCAGC

Downstream 100 bases:

>100_bases
GCGCCCGGTCGCTGGCCCGGCGCTCACCCGCCACTTGTCTCGTCCGACGCCAGCCTGTTCCGCCGGACGCCGGCCGCCAT
CGATAGCCGCCGCAACACAT

Product: DinB family protein

Products: NA

Alternate protein names: DNA Damage-Inducible Gene; DinB Family

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSALPQNPIAPSGTTDRITLPASAADTLSMLVRYKSWANGLTFKSVMDLPAGEALRQRPTRFGNMVHTLNHVYVVDDIFR
HHLQGKKHTYTSRNTDHTPAVSDLWNAVQEMDRWYVELVDNWSDEDLATAIRFEFVGGGEGVMTREQIVLHVVNHATYHR
GFVGDMMYQVPFVPPSNDLPVFIRDHYRDAR

Sequences:

>Translated_191_residues
MSALPQNPIAPSGTTDRITLPASAADTLSMLVRYKSWANGLTFKSVMDLPAGEALRQRPTRFGNMVHTLNHVYVVDDIFR
HHLQGKKHTYTSRNTDHTPAVSDLWNAVQEMDRWYVELVDNWSDEDLATAIRFEFVGGGEGVMTREQIVLHVVNHATYHR
GFVGDMMYQVPFVPPSNDLPVFIRDHYRDAR
>Mature_190_residues
SALPQNPIAPSGTTDRITLPASAADTLSMLVRYKSWANGLTFKSVMDLPAGEALRQRPTRFGNMVHTLNHVYVVDDIFRH
HLQGKKHTYTSRNTDHTPAVSDLWNAVQEMDRWYVELVDNWSDEDLATAIRFEFVGGGEGVMTREQIVLHVVNHATYHRG
FVGDMMYQVPFVPPSNDLPVFIRDHYRDAR

Specific function: Unknown

COG id: COG2318

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21753; Mature: 21622

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALPQNPIAPSGTTDRITLPASAADTLSMLVRYKSWANGLTFKSVMDLPAGEALRQRPT
CCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHCHH
RFGNMVHTLNHVYVVDDIFRHHLQGKKHTYTSRNTDHTPAVSDLWNAVQEMDRWYVELVD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NWSDEDLATAIRFEFVGGGEGVMTREQIVLHVVNHATYHRGFVGDMMYQVPFVPPSNDLP
CCCCHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCE
VFIRDHYRDAR
EEEECCCCCCC
>Mature Secondary Structure 
SALPQNPIAPSGTTDRITLPASAADTLSMLVRYKSWANGLTFKSVMDLPAGEALRQRPT
CCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHCHH
RFGNMVHTLNHVYVVDDIFRHHLQGKKHTYTSRNTDHTPAVSDLWNAVQEMDRWYVELVD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NWSDEDLATAIRFEFVGGGEGVMTREQIVLHVVNHATYHRGFVGDMMYQVPFVPPSNDLP
CCCCHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCE
VFIRDHYRDAR
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA