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The map label for this gene is yddE [C]

Identifier: 116690008

GI number: 116690008

Start: 2203221

End: 2204066

Strand: Direct

Name: yddE [C]

Synonym: Bcen2424_1987

Alternate gene names: 116690008

Gene position: 2203221-2204066 (Clockwise)

Preceding gene: 116690007

Following gene: 116690009

Centisome position: 63.24

GC content: 66.19

Gene sequence:

>846_bases
ATGAGCTTTGCGATCCATATGGTCGACGTCTTCGGCGCCGAACCGCTTTCGGGCAATCCGCTGGCGGTCGTCATCGGTGC
CGACGCCCTGGCAACGGATGACATGCAGCGGCTGACGCGGTGGTTCAACCTGTCCGAGACCGCGTTTCTGTTGCCGCCCA
CGCATCCCGAGGCGGACTACCGGGTCAGGATCTTCACGCTGGACAGGGAGATGCCTTTTGCCGGGCACCCGACGCTCGGC
AGTTGCCATGCGTGGCTCTCGACTGGCCGCGTGCCGAAGCGCGCAGCGGAAATCGTCCAGGAATGCGGAGTCGGGCTGGT
TCCGATCCGACGCGATCACGAGCGGCTTTCGTTCGCCGCCCCGCCGCTGATCCGCTCCGGCGCGCCGACCCACGATGAAT
TGGACCGGGCTCGGCGACTGCTGGGGATCGAATCCGGCGATATCCTGGATGCCGCCTGGATCGACAATGGCCCCGGATGG
CTGGGCATCAGGCTGGTATCGGCGCAGACGGTGCTTGCGCTCGATCCGCTCCGCAGTTGGCCCGGCCGGATCGATGTCGG
TGTGATTGGCCCTCATGCAACGGGCGGCGATGCCGCCTTCGAGGTTCGCACGTTCTTCAGCGACCATCTGGGCGCTATCG
TCGAAGACCCGGTCACCGGCAGCCTCAATGCTTCAATGGCGCAGTGGTTGTTCGCGACGGGTGTAGTCGAGGACGACTAT
GTCGCCGCCCAGGGGACACGCGTCGGCCGCCATGGCCGCATTCATTTGACCCGCGACGCGGCTGGCCAGATCTGGGTCGG
CGGCAGGACGCGCACGCATGTCGAGGGCCGGCTCCAAGGCCTGTGA

Upstream 100 bases:

>100_bases
GGTGTTCGCCGTTGCGGGAGTCAACCTGCTTGCCTGGCAACGTTGATATCCCGGCTCGCCGGCGCCGTCACGAACTGATC
TGAATTGAAAGAGCGATGTC

Downstream 100 bases:

>100_bases
ACAGGCAAACGAGAAAGCGGCAACCTGATGTTCGGGCGGGCTGGCGCACGTGACGCCCGTCCGGGTCGCGCCATACGCCG
AGCAGCTTGCGCGCAGGACT

Product: PhzF family phenazine biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSFAIHMVDVFGAEPLSGNPLAVVIGADALATDDMQRLTRWFNLSETAFLLPPTHPEADYRVRIFTLDREMPFAGHPTLG
SCHAWLSTGRVPKRAAEIVQECGVGLVPIRRDHERLSFAAPPLIRSGAPTHDELDRARRLLGIESGDILDAAWIDNGPGW
LGIRLVSAQTVLALDPLRSWPGRIDVGVIGPHATGGDAAFEVRTFFSDHLGAIVEDPVTGSLNASMAQWLFATGVVEDDY
VAAQGTRVGRHGRIHLTRDAAGQIWVGGRTRTHVEGRLQGL

Sequences:

>Translated_281_residues
MSFAIHMVDVFGAEPLSGNPLAVVIGADALATDDMQRLTRWFNLSETAFLLPPTHPEADYRVRIFTLDREMPFAGHPTLG
SCHAWLSTGRVPKRAAEIVQECGVGLVPIRRDHERLSFAAPPLIRSGAPTHDELDRARRLLGIESGDILDAAWIDNGPGW
LGIRLVSAQTVLALDPLRSWPGRIDVGVIGPHATGGDAAFEVRTFFSDHLGAIVEDPVTGSLNASMAQWLFATGVVEDDY
VAAQGTRVGRHGRIHLTRDAAGQIWVGGRTRTHVEGRLQGL
>Mature_280_residues
SFAIHMVDVFGAEPLSGNPLAVVIGADALATDDMQRLTRWFNLSETAFLLPPTHPEADYRVRIFTLDREMPFAGHPTLGS
CHAWLSTGRVPKRAAEIVQECGVGLVPIRRDHERLSFAAPPLIRSGAPTHDELDRARRLLGIESGDILDAAWIDNGPGWL
GIRLVSAQTVLALDPLRSWPGRIDVGVIGPHATGGDAAFEVRTFFSDHLGAIVEDPVTGSLNASMAQWLFATGVVEDDYV
AAQGTRVGRHGRIHLTRDAAGQIWVGGRTRTHVEGRLQGL

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321818, Length=290, Percent_Identity=31.3793103448276, Blast_Score=138, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 30468; Mature: 30337

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFAIHMVDVFGAEPLSGNPLAVVIGADALATDDMQRLTRWFNLSETAFLLPPTHPEADY
CCEEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCE
RVRIFTLDREMPFAGHPTLGSCHAWLSTGRVPKRAAEIVQECGVGLVPIRRDHERLSFAA
EEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCHHHCCC
PPLIRSGAPTHDELDRARRLLGIESGDILDAAWIDNGPGWLGIRLVSAQTVLALDPLRSW
CCHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEECCHHCC
PGRIDVGVIGPHATGGDAAFEVRTFFSDHLGAIVEDPVTGSLNASMAQWLFATGVVEDDY
CCEEEEEEECCCCCCCCCEEHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCCCCCCE
VAAQGTRVGRHGRIHLTRDAAGQIWVGGRTRTHVEGRLQGL
EEECCCCCCCCCEEEEEECCCCEEEECCCEEEEECEEECCC
>Mature Secondary Structure 
SFAIHMVDVFGAEPLSGNPLAVVIGADALATDDMQRLTRWFNLSETAFLLPPTHPEADY
CEEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCE
RVRIFTLDREMPFAGHPTLGSCHAWLSTGRVPKRAAEIVQECGVGLVPIRRDHERLSFAA
EEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCHHHCCC
PPLIRSGAPTHDELDRARRLLGIESGDILDAAWIDNGPGWLGIRLVSAQTVLALDPLRSW
CCHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEECCHHCC
PGRIDVGVIGPHATGGDAAFEVRTFFSDHLGAIVEDPVTGSLNASMAQWLFATGVVEDDY
CCEEEEEEECCCCCCCCCEEHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCCCCCCE
VAAQGTRVGRHGRIHLTRDAAGQIWVGGRTRTHVEGRLQGL
EEECCCCCCCCCEEEEEECCCCEEEECCCEEEEECEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]