Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690015

Identifier: 116690015

GI number: 116690015

Start: 2210798

End: 2212018

Strand: Direct

Name: 116690015

Synonym: Bcen2424_1994

Alternate gene names: NA

Gene position: 2210798-2212018 (Clockwise)

Preceding gene: 116690009

Following gene: 116690016

Centisome position: 63.46

GC content: 74.45

Gene sequence:

>1221_bases
ATGGATTCGCTGATCACGGCGGCCGCGCGCGCGCTCGCGACCGGTGACGCGCTCGGCGCGCTGAACCGCGTCGCGCTGCG
CGACGATGCGCCGGCGCTCGCGCTGCGCGGCATCGCGCTGGCGCAGCTCGGCGATTTCGACCGGGCGCGCGCGCTCGTGC
GCGCCGCCGCACGCGCATTCGGTGCGAAGGAAACGGTCGCACGGGCGCGCTGCGTCGTCGCGGAAGCCGAGATCGCGCTC
GCGTCGCGCGACCTGCGCTGGCCGACGCGCGCGCTCGACGCGGCCTGCGCGACGCTCGACACGCACGGCGACCGCGCGAA
CGCCGCGCATGCCCGCTATCTCGGCGTGCGCCGGTTGCTGCTGATCGGTCAGCTCGACGAGGCCGAACGGCTGCTTGCAT
ATCTCGATCCCGTGCCGCTACCGCCCGCGTCACGCGCCACCCATGAATTGATCGCGGCCGGCATCGCGATGCGCCGCCTC
CGCACGCACGCGGCCCGTACGGCACTCGACCGTGCGCGGACAGCCGCCCGCGCCGCCGGCATCGCCGCGCTGACGGCCGA
GGTCGATACCGCGGCGCGCGTGCTCGACGCACCGGCCGCCCGGCTCATCGCACGCGGCACGTCGCGGCTCGTACCGCTCG
ACGAAGTGGAGACGCTGTTCGAGTCGAATGCGCTCGTCGTCGACGCGTGCCGCCACACGGTGCGCGATGCGCGCACGACC
GTGTCGCTCGCGCGGCGTCCGGTGCTCTTCGTGCTCGCCCGTGCGCTGGGCGAAGCGTGGCCGGCCGACGTATCGAGAAA
CGCGCTCGTCGCCGCCGCGTTCCGTGCGAAACAAGCCGACGAATCGCATCGTGCGCGGCTGCGTGTCGAGATCGGCCGGC
TGCGTGCGGTGCTGCGCCCGCTCGCGAACGTCGTCGCGACGCCGCGCGGCTTCGCGCTCGAACCGCTCGGCGTGCGCGAA
ACCGTCGTCCTCGCGCGTCCGGTCGACGATCGCCATGCGGCCGTGCTCGCGCTCCTCGCCGACGGCGAAGCGTGGTCGAG
CTCCGCGCTGGCGCTCGCGCTCGGCGCCAGCCAGCGCACCGTGCAGCGTGCGCTGGATGCGCTCGCCGAAACCGGCAAGG
TGCAGGCGCTCGGCCGCGGACGCGCGCGCCGCTGGCTGACGCCGCCGCTGCCCGGATTCGCGACGACCTTGTTACTCCCG
GTTGCGCTGCCGGGCGATTAG

Upstream 100 bases:

>100_bases
TCCGATGGGTATCCGGGCACGGCGTCCGAGGCCGTGTGCGTGGTGCTAGATTAGTGGCGGGCATCGGACCGGAGGGAGTG
ACAAGTGTGTCGGGATTCGG

Downstream 100 bases:

>100_bases
GATGGCCCCATCGAACGACGAGGTGACAAACATGAAACGCTCCACCGCAGAGATCCTTCACGAGTACGGCCCGTTTCCGG
GCGTCGACGGCGTGCACGGC

Product: helix-turn-helix, type 11 domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MDSLITAAARALATGDALGALNRVALRDDAPALALRGIALAQLGDFDRARALVRAAARAFGAKETVARARCVVAEAEIAL
ASRDLRWPTRALDAACATLDTHGDRANAAHARYLGVRRLLLIGQLDEAERLLAYLDPVPLPPASRATHELIAAGIAMRRL
RTHAARTALDRARTAARAAGIAALTAEVDTAARVLDAPAARLIARGTSRLVPLDEVETLFESNALVVDACRHTVRDARTT
VSLARRPVLFVLARALGEAWPADVSRNALVAAAFRAKQADESHRARLRVEIGRLRAVLRPLANVVATPRGFALEPLGVRE
TVVLARPVDDRHAAVLALLADGEAWSSSALALALGASQRTVQRALDALAETGKVQALGRGRARRWLTPPLPGFATTLLLP
VALPGD

Sequences:

>Translated_406_residues
MDSLITAAARALATGDALGALNRVALRDDAPALALRGIALAQLGDFDRARALVRAAARAFGAKETVARARCVVAEAEIAL
ASRDLRWPTRALDAACATLDTHGDRANAAHARYLGVRRLLLIGQLDEAERLLAYLDPVPLPPASRATHELIAAGIAMRRL
RTHAARTALDRARTAARAAGIAALTAEVDTAARVLDAPAARLIARGTSRLVPLDEVETLFESNALVVDACRHTVRDARTT
VSLARRPVLFVLARALGEAWPADVSRNALVAAAFRAKQADESHRARLRVEIGRLRAVLRPLANVVATPRGFALEPLGVRE
TVVLARPVDDRHAAVLALLADGEAWSSSALALALGASQRTVQRALDALAETGKVQALGRGRARRWLTPPLPGFATTLLLP
VALPGD
>Mature_406_residues
MDSLITAAARALATGDALGALNRVALRDDAPALALRGIALAQLGDFDRARALVRAAARAFGAKETVARARCVVAEAEIAL
ASRDLRWPTRALDAACATLDTHGDRANAAHARYLGVRRLLLIGQLDEAERLLAYLDPVPLPPASRATHELIAAGIAMRRL
RTHAARTALDRARTAARAAGIAALTAEVDTAARVLDAPAARLIARGTSRLVPLDEVETLFESNALVVDACRHTVRDARTT
VSLARRPVLFVLARALGEAWPADVSRNALVAAAFRAKQADESHRARLRVEIGRLRAVLRPLANVVATPRGFALEPLGVRE
TVVLARPVDDRHAAVLALLADGEAWSSSALALALGASQRTVQRALDALAETGKVQALGRGRARRWLTPPLPGFATTLLLP
VALPGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43016; Mature: 43016

Theoretical pI: Translated: 11.63; Mature: 11.63

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLITAAARALATGDALGALNRVALRDDAPALALRGIALAQLGDFDRARALVRAAARAF
CCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GAKETVARARCVVAEAEIALASRDLRWPTRALDAACATLDTHGDRANAAHARYLGVRRLL
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LIGQLDEAERLLAYLDPVPLPPASRATHELIAAGIAMRRLRTHAARTALDRARTAARAAG
HHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAALTAEVDTAARVLDAPAARLIARGTSRLVPLDEVETLFESNALVVDACRHTVRDARTT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHH
VSLARRPVLFVLARALGEAWPADVSRNALVAAAFRAKQADESHRARLRVEIGRLRAVLRP
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LANVVATPRGFALEPLGVRETVVLARPVDDRHAAVLALLADGEAWSSSALALALGASQRT
HHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHH
VQRALDALAETGKVQALGRGRARRWLTPPLPGFATTLLLPVALPGD
HHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDSLITAAARALATGDALGALNRVALRDDAPALALRGIALAQLGDFDRARALVRAAARAF
CCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GAKETVARARCVVAEAEIALASRDLRWPTRALDAACATLDTHGDRANAAHARYLGVRRLL
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LIGQLDEAERLLAYLDPVPLPPASRATHELIAAGIAMRRLRTHAARTALDRARTAARAAG
HHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAALTAEVDTAARVLDAPAARLIARGTSRLVPLDEVETLFESNALVVDACRHTVRDARTT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHH
VSLARRPVLFVLARALGEAWPADVSRNALVAAAFRAKQADESHRARLRVEIGRLRAVLRP
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LANVVATPRGFALEPLGVRETVVLARPVDDRHAAVLALLADGEAWSSSALALALGASQRT
HHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHH
VQRALDALAETGKVQALGRGRARRWLTPPLPGFATTLLLPVALPGD
HHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA