Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is tauA [H]
Identifier: 116689995
GI number: 116689995
Start: 2192571
End: 2193995
Strand: Direct
Name: tauA [H]
Synonym: Bcen2424_1974
Alternate gene names: 116689995
Gene position: 2192571-2193995 (Clockwise)
Preceding gene: 116689994
Following gene: 116689996
Centisome position: 62.93
GC content: 66.53
Gene sequence:
>1425_bases ATGAAAACCACGCTACGGATGTTTCGCCTGCTCGCCGCGTCGATCGCGGTCGCGGCCACCGGTTTTGCACATGCGGAGAC AATCCGCGTCGCGATCGGCACACAGGACACGACGATCAACTGCGCGACCGGCGGTCTGCTGATCCGTGAACTGCATCTGC TCGACAAGTACCTGCCGCGCACCGGCAAGTACCAGGACGTGAAATACGACGTGCAGTGGAAGGATTTCACGTCCGGCGCG CCGCTCACCAACGAGATGGTCGCCGGCAAGCTCGACTTCGGCGCGATGGCCGATTTCCCCGGTGCCTTGAACGGCGCGGC GTTCCGCAAGGCCGGCCGCAAGAGCGTGTTCATCACCGTGCTCGACGGCAGCATCGACGGCAGCGGCAACGGGATCGTCG TCCCGTCGAATTCGACGGTGCACGGGCTGGCCGACCTGAAGGGCAAGACGATCTCGGTGCCGTTCGCATCGACCGCGCAC GGCATGCTGCTGCGCGCGATCAAGGCCCAGGGCTGGAACCCCGACACCGACGTGAACATCGTCACGCAGGCGCCCGAAGT GGCCGGCAGCGCGCTGAAGGCGAACAAGATCGACGCGCATGCGGATTTCGTGCCGTTCGCCGACCTGTTCCCGTACCGCG GCATCGCGCGCAAGATCTACGACGGCGCGCAGACCCACGCGCCGACCTTCCACGGCGCACTCGTCGATGCGGACTACGCG CAGCGCTATCCGGAAATCGTCGTGGCCTATCTGCGTGCCGCGATCGAGGCGAACCGCCTGCTCGCGCAGAACCCGGAAAA GTACAGCCTGCTGATCGAGAAGGTCACCGGCATCGAGGCGCCGGTCGACTACCTGTATCACGGGCCGCTCGGCATCCAGA CCCGCGACCTGACGTGGAAGCCCGAATACCGGCAAGCGGTCGCGACGGCGATCGATACGCTGAAGCTGCTGAAGAAGACC GACTCCGCGCCCGACCCCGCGACGTTCGTCGACGACCGCTATATCCGCGCGGCGTTCAAGGCGTCCGGGCTCGATTACGA CGCGGCGTTGAAACACTACGGCAAGCAGCCGCTCGTCGCGAACGATGCGACGACCGGCAAGCCGATCCGCGATTTCAACG ACGTCGCGCAAGTGTGGCTCGCCAACGACGAACCGGTACGCAACTACGCGAGCCCCACCGCCGCGTTCGTGGCGCTCGGC AAGCTCGGCCCTTCCGCGAAGGTGCGGGCGGTGTTCGTGCACGACCATGCGAGCGGCCTGAAGCTGTTCGCCGACCAGGC GTGGTACGTGAAGGACGCGCACGGCGTGCTCACCGCGTTCCTGCTGAAGTCGGGCGCCGACGCGTACGCGCAGCAGGTAT CGGGCGCTGTGGTCGACTACGCGGCCGCGAAGACCGTCACCGCGCAGGCGCTCGCCGCCCGCTGA
Upstream 100 bases:
>100_bases CCAAGGATCGTGCCGGCCATTTTAACGGTGGAATGCCGCTGTCAAACAGCGGCGCTCCTTTCCTCCCCGTCCTGAAGGAC GGGGTTTCTCGGAGCAACTG
Downstream 100 bases:
>100_bases ACGTCGCGCGCCTTTCCCCTTCCATTCGTCGACCCCGGACTTCCGCATGGCTGCCACCCTCGACCTCGTCAAACGCCGTC TCGCCGACGCACCGCGCAGC
Product: nitrate ABC transporter, periplasmic nitrate-binding protein, putative
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: Sulfate starvation-induced protein 1; SSI1 [H]
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MKTTLRMFRLLAASIAVAATGFAHAETIRVAIGTQDTTINCATGGLLIRELHLLDKYLPRTGKYQDVKYDVQWKDFTSGA PLTNEMVAGKLDFGAMADFPGALNGAAFRKAGRKSVFITVLDGSIDGSGNGIVVPSNSTVHGLADLKGKTISVPFASTAH GMLLRAIKAQGWNPDTDVNIVTQAPEVAGSALKANKIDAHADFVPFADLFPYRGIARKIYDGAQTHAPTFHGALVDADYA QRYPEIVVAYLRAAIEANRLLAQNPEKYSLLIEKVTGIEAPVDYLYHGPLGIQTRDLTWKPEYRQAVATAIDTLKLLKKT DSAPDPATFVDDRYIRAAFKASGLDYDAALKHYGKQPLVANDATTGKPIRDFNDVAQVWLANDEPVRNYASPTAAFVALG KLGPSAKVRAVFVHDHASGLKLFADQAWYVKDAHGVLTAFLLKSGADAYAQQVSGAVVDYAAAKTVTAQALAAR
Sequences:
>Translated_474_residues MKTTLRMFRLLAASIAVAATGFAHAETIRVAIGTQDTTINCATGGLLIRELHLLDKYLPRTGKYQDVKYDVQWKDFTSGA PLTNEMVAGKLDFGAMADFPGALNGAAFRKAGRKSVFITVLDGSIDGSGNGIVVPSNSTVHGLADLKGKTISVPFASTAH GMLLRAIKAQGWNPDTDVNIVTQAPEVAGSALKANKIDAHADFVPFADLFPYRGIARKIYDGAQTHAPTFHGALVDADYA QRYPEIVVAYLRAAIEANRLLAQNPEKYSLLIEKVTGIEAPVDYLYHGPLGIQTRDLTWKPEYRQAVATAIDTLKLLKKT DSAPDPATFVDDRYIRAAFKASGLDYDAALKHYGKQPLVANDATTGKPIRDFNDVAQVWLANDEPVRNYASPTAAFVALG KLGPSAKVRAVFVHDHASGLKLFADQAWYVKDAHGVLTAFLLKSGADAYAQQVSGAVVDYAAAKTVTAQALAAR >Mature_474_residues MKTTLRMFRLLAASIAVAATGFAHAETIRVAIGTQDTTINCATGGLLIRELHLLDKYLPRTGKYQDVKYDVQWKDFTSGA PLTNEMVAGKLDFGAMADFPGALNGAAFRKAGRKSVFITVLDGSIDGSGNGIVVPSNSTVHGLADLKGKTISVPFASTAH GMLLRAIKAQGWNPDTDVNIVTQAPEVAGSALKANKIDAHADFVPFADLFPYRGIARKIYDGAQTHAPTFHGALVDADYA QRYPEIVVAYLRAAIEANRLLAQNPEKYSLLIEKVTGIEAPVDYLYHGPLGIQTRDLTWKPEYRQAVATAIDTLKLLKKT DSAPDPATFVDDRYIRAAFKASGLDYDAALKHYGKQPLVANDATTGKPIRDFNDVAQVWLANDEPVRNYASPTAAFVALG KLGPSAKVRAVFVHDHASGLKLFADQAWYVKDAHGVLTAFLLKSGADAYAQQVSGAVVDYAAAKTVTAQALAAR
Specific function: Part of a binding-protein-dependent transport system for taurine [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=281, Percent_Identity=28.1138790035587, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI87081803, Length=283, Percent_Identity=27.5618374558304, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 - InterPro: IPR001638 - InterPro: IPR010068 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 50920; Mature: 50920
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTLRMFRLLAASIAVAATGFAHAETIRVAIGTQDTTINCATGGLLIRELHLLDKYLPR CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCC TGKYQDVKYDVQWKDFTSGAPLTNEMVAGKLDFGAMADFPGALNGAAFRKAGRKSVFITV CCCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEE LDGSIDGSGNGIVVPSNSTVHGLADLKGKTISVPFASTAHGMLLRAIKAQGWNPDTDVNI EECCCCCCCCEEEECCCCCEEEHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEE VTQAPEVAGSALKANKIDAHADFVPFADLFPYRGIARKIYDGAQTHAPTFHGALVDADYA EECCCHHHCCHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCEEECCHHH QRYPEIVVAYLRAAIEANRLLAQNPEKYSLLIEKVTGIEAPVDYLYHGPLGIQTRDLTWK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHEECCCCCEECCCCCC PEYRQAVATAIDTLKLLKKTDSAPDPATFVDDRYIRAAFKASGLDYDAALKHYGKQPLVA HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCEEE NDATTGKPIRDFNDVAQVWLANDEPVRNYASPTAAFVALGKLGPSAKVRAVFVHDHASGL CCCCCCCCCHHHHHHHHEEECCCCCHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCC KLFADQAWYVKDAHGVLTAFLLKSGADAYAQQVSGAVVDYAAAKTVTAQALAAR EEEECCCEEEECHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTTLRMFRLLAASIAVAATGFAHAETIRVAIGTQDTTINCATGGLLIRELHLLDKYLPR CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCC TGKYQDVKYDVQWKDFTSGAPLTNEMVAGKLDFGAMADFPGALNGAAFRKAGRKSVFITV CCCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEE LDGSIDGSGNGIVVPSNSTVHGLADLKGKTISVPFASTAHGMLLRAIKAQGWNPDTDVNI EECCCCCCCCEEEECCCCCEEEHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEE VTQAPEVAGSALKANKIDAHADFVPFADLFPYRGIARKIYDGAQTHAPTFHGALVDADYA EECCCHHHCCHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCEEECCHHH QRYPEIVVAYLRAAIEANRLLAQNPEKYSLLIEKVTGIEAPVDYLYHGPLGIQTRDLTWK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHEECCCCCEECCCCCC PEYRQAVATAIDTLKLLKKTDSAPDPATFVDDRYIRAAFKASGLDYDAALKHYGKQPLVA HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCEEE NDATTGKPIRDFNDVAQVWLANDEPVRNYASPTAAFVALGKLGPSAKVRAVFVHDHASGL CCCCCCCCCHHHHHHHHEEECCCCCHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCC KLFADQAWYVKDAHGVLTAFLLKSGADAYAQQVSGAVVDYAAAKTVTAQALAAR EEEECCCEEEECHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 8774726 [H]