Click here to switch to the map view.

The map label for this gene is hycF [C]

Identifier: 116689994

GI number: 116689994

Start: 2192204

End: 2192449

Strand: Direct

Name: hycF [C]

Synonym: Bcen2424_1973

Alternate gene names: 116689994

Gene position: 2192204-2192449 (Clockwise)

Preceding gene: 116689993

Following gene: 116689995

Centisome position: 62.92

GC content: 63.41

Gene sequence:

>246_bases
ATGTCCCATACCCCGCACGACATCTTCCAGCGCAGCAGCGCGCCCGTGACGATCGACGAGTCGCTGTGCATCGCCGACAA
GGGCTGTACCGTGTGTGTCGACGTGTGCCCGCTCGACCTGCTCGCGATCGACGTCACCAAGGGCAAGGCCTACATGCAGT
TCGACGAATGCTGGTACTGCATGCCGTGCGAACGCGACTGCCCGACCGGCGCGGTCAAGGTCGACATTCCTTACCTGCTG
CGGTGA

Upstream 100 bases:

>100_bases
CGTACGTCGTGCCGCTCGCCGACGACGAACGCGGCGCCTACGCGCAGTTGCGCATCCGCGAACCGGCCGCGCTCGCGGCC
GCCCTTTGAGGAACCTTGCC

Downstream 100 bases:

>100_bases
CGCGGCGCGGCGCGGCGCCCGCCAAGGATCGTGCCGGCCATTTTAACGGTGGAATGCCGCTGTCAAACAGCGGCGCTCCT
TTCCTCCCCGTCCTGAAGGA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: CO2; H2; oxidized ferredoxin + [C]

Alternate protein names: Ferredoxin 4Fe-4S; 4Fe-4S Ferredoxin; Ferredoxin-Like Protein

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSHTPHDIFQRSSAPVTIDESLCIADKGCTVCVDVCPLDLLAIDVTKGKAYMQFDECWYCMPCERDCPTGAVKVDIPYLL
R

Sequences:

>Translated_81_residues
MSHTPHDIFQRSSAPVTIDESLCIADKGCTVCVDVCPLDLLAIDVTKGKAYMQFDECWYCMPCERDCPTGAVKVDIPYLL
R
>Mature_80_residues
SHTPHDIFQRSSAPVTIDESLCIADKGCTVCVDVCPLDLLAIDVTKGKAYMQFDECWYCMPCERDCPTGAVKVDIPYLLR

Specific function: Probable Electron Transfer Protein For Hydrogenase 3 [C]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9044; Mature: 8912

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
13.6 %Cys+Met (Translated Protein)
10.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
12.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTPHDIFQRSSAPVTIDESLCIADKGCTVCVDVCPLDLLAIDVTKGKAYMQFDECWYC
CCCCCCHHHHCCCCCEEECCCEEEECCCCEEEEECCCCEEEEEEECCCCEEEEECCCEEE
MPCERDCPTGAVKVDIPYLLR
CCCCCCCCCCEEEECCCEECC
>Mature Secondary Structure 
SHTPHDIFQRSSAPVTIDESLCIADKGCTVCVDVCPLDLLAIDVTKGKAYMQFDECWYC
CCCCCHHHHCCCCCEEECCCEEEECCCCEEEEECCCCEEEEEEECCCCEEEEECCCEEE
MPCERDCPTGAVKVDIPYLLR
CCCCCCCCCCEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; Proton; reduced ferredoxin [C]

Specific reaction: formate = CO2 + H2 Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA