Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689951
Identifier: 116689951
GI number: 116689951
Start: 2146399
End: 2147607
Strand: Direct
Name: 116689951
Synonym: Bcen2424_1930
Alternate gene names: NA
Gene position: 2146399-2147607 (Clockwise)
Preceding gene: 116689950
Following gene: 116689952
Centisome position: 61.61
GC content: 73.2
Gene sequence:
>1209_bases ATGAAGACCCTGTCCCCGGATGCCTCACTCTCACCCGACGGCCGCGCGTCGACGTTCGCGCGCTCGACGCTGGTCGCGCT CGTCGTGTTCGCGGCCATCACGCCGCTGTTGCTGCTCGTGGCGCCCGCCGTTGCCGGTCAGCTCGCGACGCAGCTCGGCT TGTCCGCGTCGCAGATCGGCACCTACTTCTTCGTGGAACTCGGCGCGTTCAGCCTCGCGACCGCGCCGTCGTACCTGTGG CTCGGCCGCATCGACGCGCGCCGCGTCGCCGCGTTCGCCGTCGTGCTGTTCGGCGCGGGCAACCTGCTGACCGCGCTGTG GATGCCGGGCTTCGCCGCGCTGCTCGCGCTGCGCGCCGTCACCGCGCTCGGCGGCGGCTCGCTGATGGTGCTCTGCATGA CGAGCGCGGCGACGAGCCAGAACAGCGACCGCGTATACGGCCTGTGGGTCGTCGGCCAGTTGATCGCGGGCGCGATCGGC CTGTTCGTGTTGCCGCACGTGTTCGCCGCGTTCGGGCTGCGCGCGCTGTATGTCGCGCTCGCCGGGCTCGCGCTGCTCGC GGCGCCGCTGTCGCGCGGCTTTCCGTCGTCGCTCGGCACGCGGACGGCAGCCGCGCATACCGCGCGCGGCGACGCGCCGC CCACGCCGCGACCCTTCGTCGTGCTCGCCATCGGCGCGGTGCTGACGTTCTATCTCGCGATCGGCAGCGTATGGACGTTC GCGAGCCGCGCGGCGGCCGAGGCCGGGCTCGACCCGCAGACGACCGGCAACGTGCTCGCGATCGCGAGCGTGATGGGCAT CGCCGGCGCGGCGCTCGCGTCGTGCGCGGGCGGCCGGCTCGCGCGGCGCGCGATGCTGGCGGCCGGTTACGCGCTGCTCG CGGCATCGCTCGTCGCGCTCGCCGCGATGCGTGACACCGGCGGCTACGGCGCGGCGATCTTCGCGTTCAAGTTCGCGTGG ACCTTCGTGCTGCCGTTCATCCTCGCGACAGTCGCGCAGATCGACACGTCGGGCCGCCTCGTCGCGACGCTCAATTTCGT GATCGGCGCGGGGCTCGCCGCCGGCCCGCTGCTGGCCGGCCTGATGCTCGACGCCGGCGGCTCGATGCGCGCGCTGTTCG TGGCCGCGACGGCCGTCGCGATCGTGTCGTTCGCCGCGCTGCGCCACATCGATCGCCGCGCGCGCTCTTCCGTTTCCTCC CAACCGTGA
Upstream 100 bases:
>100_bases CGTCTACGAATACGACCCCACGCCGCTCGCCGGCGCGTCGCAGTTCGGCGCGATGGTCGGCATGTACCACCTGTTCTGAT TCACTCAACGAGACCCCGCC
Downstream 100 bases:
>100_bases CAGGTCACGCATCCATGAATCGCACTGCCTTCTTCACCGACGAACGCACTTTCTGGCATACCGGCGGCACGCACGCGCTG TTCTTCCCAGTCGGAGGCTG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Transporter; Facilitator Family Transporter; MFS-Type Transporter
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MKTLSPDASLSPDGRASTFARSTLVALVVFAAITPLLLLVAPAVAGQLATQLGLSASQIGTYFFVELGAFSLATAPSYLW LGRIDARRVAAFAVVLFGAGNLLTALWMPGFAALLALRAVTALGGGSLMVLCMTSAATSQNSDRVYGLWVVGQLIAGAIG LFVLPHVFAAFGLRALYVALAGLALLAAPLSRGFPSSLGTRTAAAHTARGDAPPTPRPFVVLAIGAVLTFYLAIGSVWTF ASRAAAEAGLDPQTTGNVLAIASVMGIAGAALASCAGGRLARRAMLAAGYALLAASLVALAAMRDTGGYGAAIFAFKFAW TFVLPFILATVAQIDTSGRLVATLNFVIGAGLAAGPLLAGLMLDAGGSMRALFVAATAVAIVSFAALRHIDRRARSSVSS QP
Sequences:
>Translated_402_residues MKTLSPDASLSPDGRASTFARSTLVALVVFAAITPLLLLVAPAVAGQLATQLGLSASQIGTYFFVELGAFSLATAPSYLW LGRIDARRVAAFAVVLFGAGNLLTALWMPGFAALLALRAVTALGGGSLMVLCMTSAATSQNSDRVYGLWVVGQLIAGAIG LFVLPHVFAAFGLRALYVALAGLALLAAPLSRGFPSSLGTRTAAAHTARGDAPPTPRPFVVLAIGAVLTFYLAIGSVWTF ASRAAAEAGLDPQTTGNVLAIASVMGIAGAALASCAGGRLARRAMLAAGYALLAASLVALAAMRDTGGYGAAIFAFKFAW TFVLPFILATVAQIDTSGRLVATLNFVIGAGLAAGPLLAGLMLDAGGSMRALFVAATAVAIVSFAALRHIDRRARSSVSS QP >Mature_402_residues MKTLSPDASLSPDGRASTFARSTLVALVVFAAITPLLLLVAPAVAGQLATQLGLSASQIGTYFFVELGAFSLATAPSYLW LGRIDARRVAAFAVVLFGAGNLLTALWMPGFAALLALRAVTALGGGSLMVLCMTSAATSQNSDRVYGLWVVGQLIAGAIG LFVLPHVFAAFGLRALYVALAGLALLAAPLSRGFPSSLGTRTAAAHTARGDAPPTPRPFVVLAIGAVLTFYLAIGSVWTF ASRAAAEAGLDPQTTGNVLAIASVMGIAGAALASCAGGRLARRAMLAAGYALLAASLVALAAMRDTGGYGAAIFAFKFAW TFVLPFILATVAQIDTSGRLVATLNFVIGAGLAAGPLLAGLMLDAGGSMRALFVAATAVAIVSFAALRHIDRRARSSVSS QP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40756; Mature: 40756
Theoretical pI: Translated: 11.41; Mature: 11.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLSPDASLSPDGRASTFARSTLVALVVFAAITPLLLLVAPAVAGQLATQLGLSASQIG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TYFFVELGAFSLATAPSYLWLGRIDARRVAAFAVVLFGAGNLLTALWMPGFAALLALRAV HHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH TALGGGSLMVLCMTSAATSQNSDRVYGLWVVGQLIAGAIGLFVLPHVFAAFGLRALYVAL HHCCCCCEEEEEEEHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLALLAAPLSRGFPSSLGTRTAAAHTARGDAPPTPRPFVVLAIGAVLTFYLAIGSVWTF HHHHHHHHHHHCCCCCHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASRAAAEAGLDPQTTGNVLAIASVMGIAGAALASCAGGRLARRAMLAAGYALLAASLVAL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AAMRDTGGYGAAIFAFKFAWTFVLPFILATVAQIDTSGRLVATLNFVIGAGLAAGPLLAG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHH LMLDAGGSMRALFVAATAVAIVSFAALRHIDRRARSSVSSQP HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKTLSPDASLSPDGRASTFARSTLVALVVFAAITPLLLLVAPAVAGQLATQLGLSASQIG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TYFFVELGAFSLATAPSYLWLGRIDARRVAAFAVVLFGAGNLLTALWMPGFAALLALRAV HHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH TALGGGSLMVLCMTSAATSQNSDRVYGLWVVGQLIAGAIGLFVLPHVFAAFGLRALYVAL HHCCCCCEEEEEEEHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLALLAAPLSRGFPSSLGTRTAAAHTARGDAPPTPRPFVVLAIGAVLTFYLAIGSVWTF HHHHHHHHHHHCCCCCHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASRAAAEAGLDPQTTGNVLAIASVMGIAGAALASCAGGRLARRAMLAAGYALLAASLVAL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AAMRDTGGYGAAIFAFKFAWTFVLPFILATVAQIDTSGRLVATLNFVIGAGLAAGPLLAG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHH LMLDAGGSMRALFVAATAVAIVSFAALRHIDRRARSSVSSQP HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA