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The map label for this gene is omp32 [H]

Identifier: 116689950

GI number: 116689950

Start: 2145331

End: 2146377

Strand: Direct

Name: omp32 [H]

Synonym: Bcen2424_1929

Alternate gene names: 116689950

Gene position: 2145331-2146377 (Clockwise)

Preceding gene: 116689947

Following gene: 116689951

Centisome position: 61.58

GC content: 69.05

Gene sequence:

>1047_bases
GTGACGACACCCCGCTTCATCCGCACGGCCGCGGCCGCCGCGACGCTGGCCGCATGCGGCGCCGCCGCGCACGCGCAGTC
CGCCCTCACGCTGTACGGCGCGCTCGACGCCGGCGTGCAATACCTGACGCACGCCGACGGGCATCGTTCGACCGTGCGGT
TGCAGAACTACGGCATCCTGCCTTCACAGGTCGGGATCAAGGGTCACGAGGATCTCGGCGGCAGCTGGCGCGCGCTGTTC
AAGCTCGAACAGGGCCTCAACCTCAACGACGGCACCGCGACCGTGCCCGGCTACGCGTTCTTCCGCGGCGCATACGTCGG
CATCGCGGGGCCGGTCGGCACCGTCACGCTCGGCCGCCAGTTCAGCGTGCTGTTCGACAAGACGCTGTTCTACGACCCGC
TCTGGTACGGGTCGTACAGCGGCCAGGGCGTGCTCGTGCCGATGAACGCGAACTTCATCGACCATTCGGTCAAATACCAG
TCGCCGACGTTCGCCGGCTTCGACGTCGAGGCGCTCGCCGCGACTGCCGGCGTCGCCGGCAATACGCGCGCCGGACGCGT
GCTCGAGCTCGGCGGCCAGTACACGAGCAACGGCCTATCGGTCGGCGCGGTGCTGCACCAGGCGCACGGCGACGTATCGG
CGGCCGACGATGTGTCCGCGCGGCGTCGCGAACTCGGCACGCTCGCCGCGCGCTATGCGTTCGCCACGCTGCCGCTCACC
GTCTATGCAGGCGTCGAGCGCCTGACCGGCGACCTCGACGCGGCCCGCACGATCGTCTGGGGCGGCGCGCGCTACCTGAC
GTCGAACGGAATCGGCCTGAACGCGGGCGTCTACCACACCGATTCGCACACGCCGGCGATCGGCCATCCGACGCTGTTCA
TCGCAAGCACCACGTATGCACTGTCGAAACGCACCGTCGCCTACGTGAACCTCGGCTATGCGCGCAACAGCGGCCAGAGT
TCGCAGACCGTCTACGAATACGACCCCACGCCGCTCGCCGGCGCGTCGCAGTTCGGCGCGATGGTCGGCATGTACCACCT
GTTCTGA

Upstream 100 bases:

>100_bases
CCGTTCATCTGGACGACTGTTCGACGGTTTTCCCGCTGCGGACACTGCGTCGCGACAACACCAACGACAAACCGATGCAG
CACGGTATGGAGAACCCGAC

Downstream 100 bases:

>100_bases
TTCACTCAACGAGACCCCGCCATGAAGACCCTGTCCCCGGATGCCTCACTCTCACCCGACGGCCGCGCGTCGACGTTCGC
GCGCTCGACGCTGGTCGCGC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MTTPRFIRTAAAAATLAACGAAAHAQSALTLYGALDAGVQYLTHADGHRSTVRLQNYGILPSQVGIKGHEDLGGSWRALF
KLEQGLNLNDGTATVPGYAFFRGAYVGIAGPVGTVTLGRQFSVLFDKTLFYDPLWYGSYSGQGVLVPMNANFIDHSVKYQ
SPTFAGFDVEALAATAGVAGNTRAGRVLELGGQYTSNGLSVGAVLHQAHGDVSAADDVSARRRELGTLAARYAFATLPLT
VYAGVERLTGDLDAARTIVWGGARYLTSNGIGLNAGVYHTDSHTPAIGHPTLFIASTTYALSKRTVAYVNLGYARNSGQS
SQTVYEYDPTPLAGASQFGAMVGMYHLF

Sequences:

>Translated_348_residues
MTTPRFIRTAAAAATLAACGAAAHAQSALTLYGALDAGVQYLTHADGHRSTVRLQNYGILPSQVGIKGHEDLGGSWRALF
KLEQGLNLNDGTATVPGYAFFRGAYVGIAGPVGTVTLGRQFSVLFDKTLFYDPLWYGSYSGQGVLVPMNANFIDHSVKYQ
SPTFAGFDVEALAATAGVAGNTRAGRVLELGGQYTSNGLSVGAVLHQAHGDVSAADDVSARRRELGTLAARYAFATLPLT
VYAGVERLTGDLDAARTIVWGGARYLTSNGIGLNAGVYHTDSHTPAIGHPTLFIASTTYALSKRTVAYVNLGYARNSGQS
SQTVYEYDPTPLAGASQFGAMVGMYHLF
>Mature_347_residues
TTPRFIRTAAAAATLAACGAAAHAQSALTLYGALDAGVQYLTHADGHRSTVRLQNYGILPSQVGIKGHEDLGGSWRALFK
LEQGLNLNDGTATVPGYAFFRGAYVGIAGPVGTVTLGRQFSVLFDKTLFYDPLWYGSYSGQGVLVPMNANFIDHSVKYQS
PTFAGFDVEALAATAGVAGNTRAGRVLELGGQYTSNGLSVGAVLHQAHGDVSAADDVSARRRELGTLAARYAFATLPLTV
YAGVERLTGDLDAARTIVWGGARYLTSNGIGLNAGVYHTDSHTPAIGHPTLFIASTTYALSKRTVAYVNLGYARNSGQSS
QTVYEYDPTPLAGASQFGAMVGMYHLF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 36631; Mature: 36500

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPRFIRTAAAAATLAACGAAAHAQSALTLYGALDAGVQYLTHADGHRSTVRLQNYGIL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCC
PSQVGIKGHEDLGGSWRALFKLEQGLNLNDGTATVPGYAFFRGAYVGIAGPVGTVTLGRQ
CCCCCCCCCCCCCCHHHEEHHHHCCCCCCCCCCCCCCHHHHHCEEEEECCCCCEEEECCE
FSVLFDKTLFYDPLWYGSYSGQGVLVPMNANFIDHSVKYQSPTFAGFDVEALAATAGVAG
EEEEEHHHHHCCCCEECCCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHCCCCC
NTRAGRVLELGGQYTSNGLSVGAVLHQAHGDVSAADDVSARRRELGTLAARYAFATLPLT
CCCCCEEEEECCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
VYAGVERLTGDLDAARTIVWGGARYLTSNGIGLNAGVYHTDSHTPAIGHPTLFIASTTYA
HHHCHHHHHCCHHHHHEEEECCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEH
LSKRTVAYVNLGYARNSGQSSQTVYEYDPTPLAGASQFGAMVGMYHLF
HCCCEEEEEEECEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TTPRFIRTAAAAATLAACGAAAHAQSALTLYGALDAGVQYLTHADGHRSTVRLQNYGIL
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCC
PSQVGIKGHEDLGGSWRALFKLEQGLNLNDGTATVPGYAFFRGAYVGIAGPVGTVTLGRQ
CCCCCCCCCCCCCCHHHEEHHHHCCCCCCCCCCCCCCHHHHHCEEEEECCCCCEEEECCE
FSVLFDKTLFYDPLWYGSYSGQGVLVPMNANFIDHSVKYQSPTFAGFDVEALAATAGVAG
EEEEEHHHHHCCCCEECCCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHCCCCC
NTRAGRVLELGGQYTSNGLSVGAVLHQAHGDVSAADDVSARRRELGTLAARYAFATLPLT
CCCCCEEEEECCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
VYAGVERLTGDLDAARTIVWGGARYLTSNGIGLNAGVYHTDSHTPAIGHPTLFIASTTYA
HHHCHHHHHCCHHHHHEEEECCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEH
LSKRTVAYVNLGYARNSGQSSQTVYEYDPTPLAGASQFGAMVGMYHLF
HCCCEEEEEEECEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]