Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689821
Identifier: 116689821
GI number: 116689821
Start: 2001301
End: 2001897
Strand: Reverse
Name: 116689821
Synonym: Bcen2424_1800
Alternate gene names: NA
Gene position: 2001897-2001301 (Counterclockwise)
Preceding gene: 116689822
Following gene: 116689820
Centisome position: 57.46
GC content: 64.82
Gene sequence:
>597_bases ATGACGCAGCAAATCACGATGACGGCGGCAGACTTGATGACCGATCCGCGCAACGACGACAAGAACCTGTGGGTAGGCTG GGACGAGTATCATCGTCTGATCGAGCTGCTCGCGCTCCAGGTGCACGCCTCCGGCTGGAAGTTCGACCAGATCCTGTGCC TCGCGCGCGGCGGCCTGCGCGTCGGCGACCAGCTGTCGCGCATCTATGACGTGCCGCTCGCGATTCTCGCGACGAGCTCG TACCGGGAAGCGGCCGGCACCGAGCAGGGCGAGCTCGACATCGCGCAGTACATCACGATGACGCGCGGCCATCTCGCGGG CAACGTGCTGCTGGTCGACGACCTCGTCGATTCCGGCGTCACGCTCGCACGCGTGCAGGAGCATCTGAAGGAGCGCTATC CGGCGGTCACGGCCGTACGTTCGGCCGTGCTCTGGTACAAGGGTTGCTCGAAGGTCAAGCCCGACTATCACACGCAGTTC CTGCCGACGAATCCGTGGATTCATCAGCCGTTCGAGGAGTGGGACACGGTTCGTCCGCACAACCTCGAGGCGTGGATCAA GCGCGGTCGCGCACAGCGCGACGGTTCGGGCGCGTAA
Upstream 100 bases:
>100_bases GTCCAGGAAGTGGCTGGCGTGCCGGTCGACATGGTGTCGACGGGCCCGGACCGCGACGAAACGATCCTGCTCCGCCATCC GTTCAAGGTGTAATTCCGAG
Downstream 100 bases:
>100_bases GCGGCCGGCCGATCGAAGGAAAGCCTTGGTACGGCGCCGCTTGCGGCGCCGTTTTTCATTGGCGCGCGCGTGGCGCCACG CGGGGCGCCTTGCGGACCCG
Product: phosphoribosyltransferase
Products: NA
Alternate protein names: Xanthine-Guanine Phosphoribosyltransferase; Transferase; Purine Phosphoribosyltransferase; Nucleotide Phosphoribosyltransferase; Phosphoribosyl Transferase Domain Protein; Xanthine Phosphoribosyltransferase; Phosphoribosyl Transferase Domain-Containing Protein; Phosphoribosyl Transferase Domain-Containing
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTQQITMTAADLMTDPRNDDKNLWVGWDEYHRLIELLALQVHASGWKFDQILCLARGGLRVGDQLSRIYDVPLAILATSS YREAAGTEQGELDIAQYITMTRGHLAGNVLLVDDLVDSGVTLARVQEHLKERYPAVTAVRSAVLWYKGCSKVKPDYHTQF LPTNPWIHQPFEEWDTVRPHNLEAWIKRGRAQRDGSGA
Sequences:
>Translated_198_residues MTQQITMTAADLMTDPRNDDKNLWVGWDEYHRLIELLALQVHASGWKFDQILCLARGGLRVGDQLSRIYDVPLAILATSS YREAAGTEQGELDIAQYITMTRGHLAGNVLLVDDLVDSGVTLARVQEHLKERYPAVTAVRSAVLWYKGCSKVKPDYHTQF LPTNPWIHQPFEEWDTVRPHNLEAWIKRGRAQRDGSGA >Mature_197_residues TQQITMTAADLMTDPRNDDKNLWVGWDEYHRLIELLALQVHASGWKFDQILCLARGGLRVGDQLSRIYDVPLAILATSSY REAAGTEQGELDIAQYITMTRGHLAGNVLLVDDLVDSGVTLARVQEHLKERYPAVTAVRSAVLWYKGCSKVKPDYHTQFL PTNPWIHQPFEEWDTVRPHNLEAWIKRGRAQRDGSGA
Specific function: Unknown
COG id: COG2236
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22440; Mature: 22308
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQITMTAADLMTDPRNDDKNLWVGWDEYHRLIELLALQVHASGWKFDQILCLARGGLR CCCEEEEHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC VGDQLSRIYDVPLAILATSSYREAAGTEQGELDIAQYITMTRGHLAGNVLLVDDLVDSGV HHHHHHHHHHCCHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECHHHCCC TLARVQEHLKERYPAVTAVRSAVLWYKGCSKVKPDYHTQFLPTNPWIHQPFEEWDTVRPH HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHHCCCCCC NLEAWIKRGRAQRDGSGA CHHHHHHCCCCCCCCCCC >Mature Secondary Structure TQQITMTAADLMTDPRNDDKNLWVGWDEYHRLIELLALQVHASGWKFDQILCLARGGLR CCEEEEHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC VGDQLSRIYDVPLAILATSSYREAAGTEQGELDIAQYITMTRGHLAGNVLLVDDLVDSGV HHHHHHHHHHCCHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECHHHCCC TLARVQEHLKERYPAVTAVRSAVLWYKGCSKVKPDYHTQFLPTNPWIHQPFEEWDTVRPH HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHHCCCCCC NLEAWIKRGRAQRDGSGA CHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA