Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
---|---|
Accession | NC_008542 |
Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is kup
Identifier: 116689820
GI number: 116689820
Start: 1999109
End: 2001025
Strand: Reverse
Name: kup
Synonym: Bcen2424_1799
Alternate gene names: 116689820
Gene position: 2001025-1999109 (Counterclockwise)
Preceding gene: 116689821
Following gene: 116689818
Centisome position: 57.44
GC content: 64.21
Gene sequence:
>1917_bases ATGAACGACACGACTCACGCGACCGACGCCGCACACTCGCCGCATTCGACGCAACAACACTCGATGCGGGCGCTAGCGAT AGCAGCCATCGGCGTCGTGTTCGGCGACATCGGTACCAGCCCGCTGTATTCGCTCAAGGAAGCGTTCAGCCCCGCGCACG GCATTCCGCTGACCGAAGGGTCGATTCTCGGCGTGATCTCGTTGCTGTTCTGGGCCATCTTGCTGGTGGTCGGCGTCAAG TACCTGCTGTTCGTGATGCGGGCGGACAACAACGGCGAAGGCGGCGTGCTCGCGCTGATGGCGCTGTCGCTGCGGCCGCT CGATTCGAAAACCCGTGTCGCGGGCGCGCTGATGGCGCTCGGGATATTCGGCGCGTGCATGTTCTACGGGGACGCGGTGA TCACGCCGGCGATTTCCGTGATGTCGGCCGTCGAAGGTCTCGAGATCGCGACGCCGCACCTGTCCCATCTCGTGCTGCCG ATCACCATCGTGATCCTGATCGCGCTGTTCTGGATCCAGCGGCACGGTACCGCGCTGGTCGGCAAGCTGTTCGGCCCGAT CATGGTGCTGTGGTTCGTCGTGATCGCGGCGCTCGGTGTGTACCACATCGTTCGCGTGCCGGGCATCATCGCGGCAATCA ATCCGTATTACGCGGCGTCGTTCATGGCCGACCACCTGCTGCAGGCCTACGTCGTGCTCGGCTCGGTCGTGCTGGTGCTG ACCGGCGCGGAAGCGCTCTATGCGGACATGGGCCACTTCGGTGCCAAGCCGATCCGGTACGCCGCGTACGGGCTCGTGAT GCCGTCGCTCGTGCTGAACTATTTCGGTCAGGGCGCGCTGCTGATCCAGAATCCGAAAGCGATCGAAAACCCGTTCTTCC TGCTGGCACCCGAATGGGGGCTGCTGCCGCTCGTCGTGCTGTCGACGGTCGCGACCGTGATTGCGTCGCAAGCGGTGATT TCCGGCGCGTACTCGCTGACGTCGCAGGCGATCCAGCTCGGCTACGTGCCGCGCATGAAGGTGCTGCATACGTCCGAGCT CGCGATCGGCCAGATCTACGTGCCGGTCGTGAACTGGCTGCTGCTGGCCGTGATCCTCTGTATCGTCGTCGGTTTCAAGA GCTCGGACAACCTCGCGGCTGCGTACGGCATCGCGGTGACGGCGACGATGGTGATCACGACCGTGCTCGCGTGCGTCGTG ATGGTGAAGGTGTGGAACTGGAACCGGCTGCTGGTCGGCGCGATCATCGCGGTGTTCCTTGCGATCGACCTCGGCTTTTT CGGCGCAAACCTGCTGAAGGTCGCGCAGGGCGGCTGGCTGCCACTCGGCATCGGCGCGTTGCTGTTCTTCCTGCTGATGA CCTGGTACAAGGGGCGTCACATCGTCAAGGAACGCACGGCGGCCGACGGTATTCCGCTGGAGCCGTTCCTGCAGGGGCTG CTCGCGCATCCGCCGCACCGGGTGTCCGGCACCGCGATCTACCTGACCGGCAACGACAAGCTCGTCCCCGTCAGCCTGCT GCACAACCTGAAGCACAACAAGGTCCTGCACGAGCGGACCATTTTCCTGACGTTCGTCACGCGCGACATTCCGTACGTGC GCGACGACAAGCGCCAGAGCGCGCGCGACGCGGGCGGCGGGCTGTACATCGTCAAGGCCGAGTACGGCTTCAACGAGACG CCGGACGTGAAGGCCGTGCTCGAGGAATTCGGCCGGACGCACGACATGACGTTCGAGCTGATGGACACGTCGTTCTTCCT CGCGCGCGAAACGGTCGTGCCGACGCATTTGCCGGGGATGTCGATCTGGCGCGAGCGCGTATTCGCGTGGATGCACCAGA ATGCCGCGAAGCCGACCGATTTCTTCGCGATTCCGGCGAACCGCGTCGTCGAGCTCGGGACGAAGATCGAGATCTGA
Upstream 100 bases:
>100_bases TCACGTGGTTCCACGGCAACACGGCAGGGCGGCGTTTCACGGGGGCGCGAGTAGAATAGCGCTCGTTTTGTCCGACCCGG ACCCGATTATTACGCTTCAT
Downstream 100 bases:
>100_bases CGAGCGCGGCGCGCGCCGCGTTTGTCCAGATAATGAAAAAGCCCGCCTTTCGGCGGGCTTTTTTGTACGTCGACGGCTGT TCGCGTGCTCAGCGCTTCAG
Product: K+ potassium transporter
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 638; Mature: 638
Protein sequence:
>638_residues MNDTTHATDAAHSPHSTQQHSMRALAIAAIGVVFGDIGTSPLYSLKEAFSPAHGIPLTEGSILGVISLLFWAILLVVGVK YLLFVMRADNNGEGGVLALMALSLRPLDSKTRVAGALMALGIFGACMFYGDAVITPAISVMSAVEGLEIATPHLSHLVLP ITIVILIALFWIQRHGTALVGKLFGPIMVLWFVVIAALGVYHIVRVPGIIAAINPYYAASFMADHLLQAYVVLGSVVLVL TGAEALYADMGHFGAKPIRYAAYGLVMPSLVLNYFGQGALLIQNPKAIENPFFLLAPEWGLLPLVVLSTVATVIASQAVI SGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWLLLAVILCIVVGFKSSDNLAAAYGIAVTATMVITTVLACVV MVKVWNWNRLLVGAIIAVFLAIDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLEPFLQGL LAHPPHRVSGTAIYLTGNDKLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVRDDKRQSARDAGGGLYIVKAEYGFNET PDVKAVLEEFGRTHDMTFELMDTSFFLARETVVPTHLPGMSIWRERVFAWMHQNAAKPTDFFAIPANRVVELGTKIEI
Sequences:
>Translated_638_residues MNDTTHATDAAHSPHSTQQHSMRALAIAAIGVVFGDIGTSPLYSLKEAFSPAHGIPLTEGSILGVISLLFWAILLVVGVK YLLFVMRADNNGEGGVLALMALSLRPLDSKTRVAGALMALGIFGACMFYGDAVITPAISVMSAVEGLEIATPHLSHLVLP ITIVILIALFWIQRHGTALVGKLFGPIMVLWFVVIAALGVYHIVRVPGIIAAINPYYAASFMADHLLQAYVVLGSVVLVL TGAEALYADMGHFGAKPIRYAAYGLVMPSLVLNYFGQGALLIQNPKAIENPFFLLAPEWGLLPLVVLSTVATVIASQAVI SGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWLLLAVILCIVVGFKSSDNLAAAYGIAVTATMVITTVLACVV MVKVWNWNRLLVGAIIAVFLAIDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLEPFLQGL LAHPPHRVSGTAIYLTGNDKLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVRDDKRQSARDAGGGLYIVKAEYGFNET PDVKAVLEEFGRTHDMTFELMDTSFFLARETVVPTHLPGMSIWRERVFAWMHQNAAKPTDFFAIPANRVVELGTKIEI >Mature_638_residues MNDTTHATDAAHSPHSTQQHSMRALAIAAIGVVFGDIGTSPLYSLKEAFSPAHGIPLTEGSILGVISLLFWAILLVVGVK YLLFVMRADNNGEGGVLALMALSLRPLDSKTRVAGALMALGIFGACMFYGDAVITPAISVMSAVEGLEIATPHLSHLVLP ITIVILIALFWIQRHGTALVGKLFGPIMVLWFVVIAALGVYHIVRVPGIIAAINPYYAASFMADHLLQAYVVLGSVVLVL TGAEALYADMGHFGAKPIRYAAYGLVMPSLVLNYFGQGALLIQNPKAIENPFFLLAPEWGLLPLVVLSTVATVIASQAVI SGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWLLLAVILCIVVGFKSSDNLAAAYGIAVTATMVITTVLACVV MVKVWNWNRLLVGAIIAVFLAIDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLEPFLQGL LAHPPHRVSGTAIYLTGNDKLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVRDDKRQSARDAGGGLYIVKAEYGFNET PDVKAVLEEFGRTHDMTFELMDTSFFLARETVVPTHLPGMSIWRERVFAWMHQNAAKPTDFFAIPANRVVELGTKIEI
Specific function: Transport of potassium into the cell
COG id: COG3158
COG function: function code P; K+ transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family
Homologues:
Organism=Escherichia coli, GI48994960, Length=623, Percent_Identity=48.4751203852327, Blast_Score=627, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KUP_BURCA (Q1BGW2)
Other databases:
- EMBL: CP000380 - RefSeq: YP_626116.1 - STRING: Q1BGW2 - GeneID: 4097125 - GenomeReviews: CP000380_GR - KEGG: bcn:Bcen_6280 - eggNOG: COG3158 - HOGENOM: HBG351154 - OMA: ANVMERE - ProtClustDB: CLSK897039 - BioCyc: BCEN331271:BCEN_6280-MONOMER - HAMAP: MF_01522 - InterPro: IPR003855 - InterPro: IPR023051
Pfam domain/function: PF02705 K_trans
EC number: NA
Molecular weight: Translated: 69146; Mature: 69146
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x19a016dc)-; HASH(0x19725b24)-; HASH(0x1a90b754)-; HASH(0x1bdeaf8c)-; HASH(0x1bf5c100)-; HASH(0x1bddd4f8)-; HASH(0x1bca0780)-; HASH(0x1b804c9c)-; HASH(0x1b0c6380)-; HASH(0x96412a0)-; HASH(0x1bb2e1c0)-; HASH(0x407680e8)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTTHATDAAHSPHSTQQHSMRALAIAAIGVVFGDIGTSPLYSLKEAFSPAHGIPLTEG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCC SILGVISLLFWAILLVVGVKYLLFVMRADNNGEGGVLALMALSLRPLDSKTRVAGALMAL HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH GIFGACMFYGDAVITPAISVMSAVEGLEIATPHLSHLVLPITIVILIALFWIQRHGTALV HHHHHHHHHCCHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GKLFGPIMVLWFVVIAALGVYHIVRVPGIIAAINPYYAASFMADHLLQAYVVLGSVVLVL HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH TGAEALYADMGHFGAKPIRYAAYGLVMPSLVLNYFGQGALLIQNPKAIENPFFLLAPEWG CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCEEEECCCCC LLPLVVLSTVATVIASQAVISGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCHHHHHHHHHHHHHH LLAVILCIVVGFKSSDNLAAAYGIAVTATMVITTVLACVVMVKVWNWNRLLVGAIIAVFL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AIDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLEPFLQGL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH LAHPPHRVSGTAIYLTGNDKLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVRDDKRQS HCCCCCCCCCEEEEEECCCCEEHHHHHHCCHHHHHHHHHEEEEEEEECCCCCCCCCHHHH ARDAGGGLYIVKAEYGFNETPDVKAVLEEFGRTHDMTFELMDTSFFLARETVVPTHLPGM HHCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCCH SIWRERVFAWMHQNAAKPTDFFAIPANRVVELGTKIEI HHHHHHHHHHHHHCCCCCCCEEECCCHHHHHCCCCCCH >Mature Secondary Structure MNDTTHATDAAHSPHSTQQHSMRALAIAAIGVVFGDIGTSPLYSLKEAFSPAHGIPLTEG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCC SILGVISLLFWAILLVVGVKYLLFVMRADNNGEGGVLALMALSLRPLDSKTRVAGALMAL HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH GIFGACMFYGDAVITPAISVMSAVEGLEIATPHLSHLVLPITIVILIALFWIQRHGTALV HHHHHHHHHCCHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GKLFGPIMVLWFVVIAALGVYHIVRVPGIIAAINPYYAASFMADHLLQAYVVLGSVVLVL HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH TGAEALYADMGHFGAKPIRYAAYGLVMPSLVLNYFGQGALLIQNPKAIENPFFLLAPEWG CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCEEEECCCCC LLPLVVLSTVATVIASQAVISGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCHHHHHHHHHHHHHH LLAVILCIVVGFKSSDNLAAAYGIAVTATMVITTVLACVVMVKVWNWNRLLVGAIIAVFL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AIDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLEPFLQGL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH LAHPPHRVSGTAIYLTGNDKLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVRDDKRQS HCCCCCCCCCEEEEEECCCCEEHHHHHHCCHHHHHHHHHEEEEEEEECCCCCCCCCHHHH ARDAGGGLYIVKAEYGFNETPDVKAVLEEFGRTHDMTFELMDTSFFLARETVVPTHLPGM HHCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCCH SIWRERVFAWMHQNAAKPTDFFAIPANRVVELGTKIEI HHHHHHHHHHHHHCCCCCCCEEECCCHHHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA