Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is blh [H]
Identifier: 116689767
GI number: 116689767
Start: 1941684
End: 1943354
Strand: Direct
Name: blh [H]
Synonym: Bcen2424_1746
Alternate gene names: 116689767
Gene position: 1941684-1943354 (Clockwise)
Preceding gene: 116689766
Following gene: 116689768
Centisome position: 55.73
GC content: 71.27
Gene sequence:
>1671_bases ATGACCACCCTCCGCAAGCTGACCGACGCGCTGTCGGTCTCGCCGCAGATCGCGGCGGCCGACCTGCCCGCGCTTCACGC GGCGGGCATCCGCGCGATCATCTGCAACCGGCCCGACGGCGAAGGCGCCGACCAGCCGACCGTCACCGAGATCCGCGCGG CCGCCGCGCCGCTCGGCATCGGTGTGCATTACCTGCCGGTCGATACCGGCACGGTGACCGACGACCAGGCTGCGCAGTTC GGCGCGCTCGTCGCGTCGCTCGACGGGCCCGTGCTCGCGTACTGCCGCAGCGGCACGCGTTCGGCCACGCTGTGGGCGCT GTCGCAGGCGGGGCTGCGTCCGCTGGACGACCTCGTCGCCACCGCCGGCGCAGCCGGCTACGACCTGAGCGCGCTTGCAT CGCGTGTCACGCAAAACAGCCGCCACACGGCGCCCGCCGTCGACGCACGGCACGACATCGTGATCGTCGGCGCCGGTGCG GCCGGCATCGCCGTCGCGTCGAGCCTGCTCGCGCGCGACGCGTCGCTCGACATCGCGGTGATCGATCCCGCCGACGTCCA CTATTACCAGCCCGGCTGGACGATGGTCGGCGCGGGCGTGTTCCAGGCCGGCACCACCGCGCGGCCGATGACCGACGTGC TGCCGCGCGGTGTACACCGCATCCGGGCCGCCGTCACGGGCTTCGAGCCCGACGCGCACGTCGTGGTGCTCGACGGCTGC CGACGCATCGGTTATCGCAAGCTCGTCGTGTGCCCGGGGCTCAAGCTCGACTGGCACGCGATCGACGGCCTCGCCGACAC GCTCGGCCACAACGGCGTCACGTCGAACTACCGCTACGATCTCGCGCCGTACACGTGGGAACTTGTGCGCGCGTTCCGCG GCGGCAATGCGCTCTTCACGCAGCCGCCGATGCCGATCAAGTGCGCGGGCGCGCCGCAAAAGGCGATGTACCTGTCGTGC GATCACTGGCGGCGCACGGGGCGCCTCGGCGCCGCGAACGTCGAATTCCTGAATGCGGGCGGCGCGCTGTTCGGCGTCGC CGATTACGTGCCTGCGCTGATGGAGTACGTGAAAAGCTACGACATCGCGCTGTCGTTCGGCCACAACCTCGTCGCGATCG ACGGGCCCGCGCGCCGTGCGACGTTCTCGCGCGCGCTGCCCGACGGCGGCAAGGCAACCGTCGAGCGTTCGTTCGACATG ATCCACGTCGTGCCGCCGCAGAAGGCGCCCGACTTCGTGCGCGCAAGCCCGCTCGTCGACGCGGCCGGCTGGATCGACGT CGATCCGGCGACGCTGCGCCACAAGCAGTTCGAGGACATCTACGCGCTCGGCGACGTCACCAACACGACCAATGCGAAAA CGGCCGCGGCCGCGCGCAAGCAGGCGCCCGTCGTCGCGCACAACCTGCTCGCGTCGCTCGGCCGCGCGCACGGCGACGCC GCGTACGACGGCTACGGCTCGTGCCCGCTCACCGTCGAGCGCGGCAAGATCGTGCTCGCCGAATTCCTGTACGGCGGCAA GGTCGCGCCGACCTTCCCCGCGTGGCTGATCGACGGCAAACGCCCGTCGCGGCTCGCGTGGCTGCTCAAGGAGCGCGTGC TGCCGCCGCTCTACTGGAAGGCGATGCTCAAGGGCCGCGAATGGCTCGCGAAGCCCGCGATCGCGCGTTGA
Upstream 100 bases:
>100_bases CGCGCCGGCCACCTGCCCGAACCCGAGAACAACGGCGTGCGCTACCTGAAGATTCCGCTCGACGCGATCTGAGCGCCCGA ACCCCACCGAGAACTCCGAC
Downstream 100 bases:
>100_bases CCGGAGCCGGATGACGTCATGCTGATTTCCCTCGTACTCGGCGGCTTCGTCGGCGCCGTGCTCGGTTTGACCGGCGCCGG CGGCGGCATTCTTGCGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MTTLRKLTDALSVSPQIAAADLPALHAAGIRAIICNRPDGEGADQPTVTEIRAAAAPLGIGVHYLPVDTGTVTDDQAAQF GALVASLDGPVLAYCRSGTRSATLWALSQAGLRPLDDLVATAGAAGYDLSALASRVTQNSRHTAPAVDARHDIVIVGAGA AGIAVASSLLARDASLDIAVIDPADVHYYQPGWTMVGAGVFQAGTTARPMTDVLPRGVHRIRAAVTGFEPDAHVVVLDGC RRIGYRKLVVCPGLKLDWHAIDGLADTLGHNGVTSNYRYDLAPYTWELVRAFRGGNALFTQPPMPIKCAGAPQKAMYLSC DHWRRTGRLGAANVEFLNAGGALFGVADYVPALMEYVKSYDIALSFGHNLVAIDGPARRATFSRALPDGGKATVERSFDM IHVVPPQKAPDFVRASPLVDAAGWIDVDPATLRHKQFEDIYALGDVTNTTNAKTAAAARKQAPVVAHNLLASLGRAHGDA AYDGYGSCPLTVERGKIVLAEFLYGGKVAPTFPAWLIDGKRPSRLAWLLKERVLPPLYWKAMLKGREWLAKPAIAR
Sequences:
>Translated_556_residues MTTLRKLTDALSVSPQIAAADLPALHAAGIRAIICNRPDGEGADQPTVTEIRAAAAPLGIGVHYLPVDTGTVTDDQAAQF GALVASLDGPVLAYCRSGTRSATLWALSQAGLRPLDDLVATAGAAGYDLSALASRVTQNSRHTAPAVDARHDIVIVGAGA AGIAVASSLLARDASLDIAVIDPADVHYYQPGWTMVGAGVFQAGTTARPMTDVLPRGVHRIRAAVTGFEPDAHVVVLDGC RRIGYRKLVVCPGLKLDWHAIDGLADTLGHNGVTSNYRYDLAPYTWELVRAFRGGNALFTQPPMPIKCAGAPQKAMYLSC DHWRRTGRLGAANVEFLNAGGALFGVADYVPALMEYVKSYDIALSFGHNLVAIDGPARRATFSRALPDGGKATVERSFDM IHVVPPQKAPDFVRASPLVDAAGWIDVDPATLRHKQFEDIYALGDVTNTTNAKTAAAARKQAPVVAHNLLASLGRAHGDA AYDGYGSCPLTVERGKIVLAEFLYGGKVAPTFPAWLIDGKRPSRLAWLLKERVLPPLYWKAMLKGREWLAKPAIAR >Mature_555_residues TTLRKLTDALSVSPQIAAADLPALHAAGIRAIICNRPDGEGADQPTVTEIRAAAAPLGIGVHYLPVDTGTVTDDQAAQFG ALVASLDGPVLAYCRSGTRSATLWALSQAGLRPLDDLVATAGAAGYDLSALASRVTQNSRHTAPAVDARHDIVIVGAGAA GIAVASSLLARDASLDIAVIDPADVHYYQPGWTMVGAGVFQAGTTARPMTDVLPRGVHRIRAAVTGFEPDAHVVVLDGCR RIGYRKLVVCPGLKLDWHAIDGLADTLGHNGVTSNYRYDLAPYTWELVRAFRGGNALFTQPPMPIKCAGAPQKAMYLSCD HWRRTGRLGAANVEFLNAGGALFGVADYVPALMEYVKSYDIALSFGHNLVAIDGPARRATFSRALPDGGKATVERSFDMI HVVPPQKAPDFVRASPLVDAAGWIDVDPATLRHKQFEDIYALGDVTNTTNAKTAAAARKQAPVVAHNLLASLGRAHGDAA YDGYGSCPLTVERGKIVLAEFLYGGKVAPTFPAWLIDGKRPSRLAWLLKERVLPPLYWKAMLKGREWLAKPAIAR
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI10864011, Length=406, Percent_Identity=36.4532019704434, Blast_Score=305, Evalue=7e-83, Organism=Caenorhabditis elegans, GI115534373, Length=341, Percent_Identity=35.4838709677419, Blast_Score=215, Evalue=5e-56, Organism=Caenorhabditis elegans, GI17539680, Length=421, Percent_Identity=31.1163895486936, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI24657386, Length=397, Percent_Identity=36.272040302267, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24657391, Length=397, Percent_Identity=36.272040302267, Blast_Score=253, Evalue=3e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 59092; Mature: 58961
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLRKLTDALSVSPQIAAADLPALHAAGIRAIICNRPDGEGADQPTVTEIRAAAAPLGI CCHHHHHHHHHCCCCCHHHCCCCHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCC GVHYLPVDTGTVTDDQAAQFGALVASLDGPVLAYCRSGTRSATLWALSQAGLRPLDDLVA CEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHCCCCHHHHHHH TAGAAGYDLSALASRVTQNSRHTAPAVDARHDIVIVGAGAAGIAVASSLLARDASLDIAV HCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEE IDPADVHYYQPGWTMVGAGVFQAGTTARPMTDVLPRGVHRIRAAVTGFEPDAHVVVLDGC ECCCCCEEECCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC RRIGYRKLVVCPGLKLDWHAIDGLADTLGHNGVTSNYRYDLAPYTWELVRAFRGGNALFT HHCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCCCEEEE QPPMPIKCAGAPQKAMYLSCDHWRRTGRLGAANVEFLNAGGALFGVADYVPALMEYVKSY CCCCCEEECCCCCCEEEEECHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHC DIALSFGHNLVAIDGPARRATFSRALPDGGKATVERSFDMIHVVPPQKAPDFVRASPLVD CEEEECCCEEEEECCCHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCCCCCCHHCCCCCC AAGWIDVDPATLRHKQFEDIYALGDVTNTTNAKTAAAARKQAPVVAHNLLASLGRAHGDA CCCCEECCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC AYDGYGSCPLTVERGKIVLAEFLYGGKVAPTFPAWLIDGKRPSRLAWLLKERVLPPLYWK CCCCCCCCCEEEECCCEEEEEHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHH AMLKGREWLAKPAIAR HHHHCHHHHCCCCCCC >Mature Secondary Structure TTLRKLTDALSVSPQIAAADLPALHAAGIRAIICNRPDGEGADQPTVTEIRAAAAPLGI CHHHHHHHHHCCCCCHHHCCCCHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCC GVHYLPVDTGTVTDDQAAQFGALVASLDGPVLAYCRSGTRSATLWALSQAGLRPLDDLVA CEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHCCCCHHHHHHH TAGAAGYDLSALASRVTQNSRHTAPAVDARHDIVIVGAGAAGIAVASSLLARDASLDIAV HCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEE IDPADVHYYQPGWTMVGAGVFQAGTTARPMTDVLPRGVHRIRAAVTGFEPDAHVVVLDGC ECCCCCEEECCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC RRIGYRKLVVCPGLKLDWHAIDGLADTLGHNGVTSNYRYDLAPYTWELVRAFRGGNALFT HHCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCCCEEEE QPPMPIKCAGAPQKAMYLSCDHWRRTGRLGAANVEFLNAGGALFGVADYVPALMEYVKSY CCCCCEEECCCCCCEEEEECHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHC DIALSFGHNLVAIDGPARRATFSRALPDGGKATVERSFDMIHVVPPQKAPDFVRASPLVD CEEEECCCEEEEECCCHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCCCCCCHHCCCCCC AAGWIDVDPATLRHKQFEDIYALGDVTNTTNAKTAAAARKQAPVVAHNLLASLGRAHGDA CCCCEECCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC AYDGYGSCPLTVERGKIVLAEFLYGGKVAPTFPAWLIDGKRPSRLAWLLKERVLPPLYWK CCCCCCCCCEEEECCCEEEEEHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHH AMLKGREWLAKPAIAR HHHHCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]