Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is blh [H]
Identifier: 116689766
GI number: 116689766
Start: 1940771
End: 1941655
Strand: Direct
Name: blh [H]
Synonym: Bcen2424_1745
Alternate gene names: 116689766
Gene position: 1940771-1941655 (Clockwise)
Preceding gene: 116689763
Following gene: 116689767
Centisome position: 55.71
GC content: 70.17
Gene sequence:
>885_bases GTGAGCAACGCCCCCGCCCTGTCGGTCGAAGGTTTTTTCGACCCGGCGACCCACACCGTCAGCTATCTCCTGCTCGATAC GGCGAGCCGCGCGTGCGCGCTGATCGACAGCGTGCTCGACTACGACCCGAAATCCGGCCGCACGCGCACCGCGAGCGCCG ACCGGCTGATCGCGCGCGTCGCCGAACTCGGCGCGACCGTGCACTGGCTGCTGGAGACGCACGTGCACGCCGACCACCTG TCGGCCGCGCCCTACCTGAAAGCACGGGTCGGCGGCCAGATCGCAATCGGTTCGCACGTGCGCCGCGTGCAGCACGTATT CGGCACGCTGTTCAACGCAGGGCCGGGCTTTGCGGAAGACAGCCGCCAGTTCGACCGGCTCGTCGACGACGGCGACACGC TCGCGCTCGGCGCGCTGACGATCCGCGCGCTGCACACGCCGGGCCACACGCCCGCGTGCATGACCTACTGCGTCGACGAT GCGACGCAGCGCGCGGCGTTCGTCGGCGACACGCTGTTCATGCCCGACTACGGCACGGCCCGCTGCGACTTCCCCGGCGG CGACGCGCGCACGCTGTACCGCTCGATCGCGCGGGTGCTCGCGCTGCCGCCCGACACGCGACTGTTCCTGTGCCACGACT ACCAGCCGGGCGGCCGCGACGTGCAGTTCGTGACGACCGTCGCCGAGCAGCGCCGTGCGAACGTGCACGTGAAGGACGGC GTGACCGAGGACGATTTCGTCGCGATGCGCACCGCGCGCGACGCGACGCTCGACATGCCGGTGCTGATGCTGCCGTCCGT ACAGGTCAACATGCGCGCCGGCCACCTGCCCGAACCCGAGAACAACGGCGTGCGCTACCTGAAGATTCCGCTCGACGCGA TCTGA
Upstream 100 bases:
>100_bases TCAAGCCCCTGCCACATCGGCGGATGCTGCACCGCAGACTGGCACGCTTCTTGAAGTAAAGATCCCGATTGCAGATGCAG AACCCGATCGAGGACACTCC
Downstream 100 bases:
>100_bases GCGCCCGAACCCCACCGAGAACTCCGACATGACCACCCTCCGCAAGCTGACCGACGCGCTGTCGGTCTCGCCGCAGATCG CGGCGGCCGACCTGCCCGCG
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSNAPALSVEGFFDPATHTVSYLLLDTASRACALIDSVLDYDPKSGRTRTASADRLIARVAELGATVHWLLETHVHADHL SAAPYLKARVGGQIAIGSHVRRVQHVFGTLFNAGPGFAEDSRQFDRLVDDGDTLALGALTIRALHTPGHTPACMTYCVDD ATQRAAFVGDTLFMPDYGTARCDFPGGDARTLYRSIARVLALPPDTRLFLCHDYQPGGRDVQFVTTVAEQRRANVHVKDG VTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGHLPEPENNGVRYLKIPLDAI
Sequences:
>Translated_294_residues MSNAPALSVEGFFDPATHTVSYLLLDTASRACALIDSVLDYDPKSGRTRTASADRLIARVAELGATVHWLLETHVHADHL SAAPYLKARVGGQIAIGSHVRRVQHVFGTLFNAGPGFAEDSRQFDRLVDDGDTLALGALTIRALHTPGHTPACMTYCVDD ATQRAAFVGDTLFMPDYGTARCDFPGGDARTLYRSIARVLALPPDTRLFLCHDYQPGGRDVQFVTTVAEQRRANVHVKDG VTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGHLPEPENNGVRYLKIPLDAI >Mature_293_residues SNAPALSVEGFFDPATHTVSYLLLDTASRACALIDSVLDYDPKSGRTRTASADRLIARVAELGATVHWLLETHVHADHLS AAPYLKARVGGQIAIGSHVRRVQHVFGTLFNAGPGFAEDSRQFDRLVDDGDTLALGALTIRALHTPGHTPACMTYCVDDA TQRAAFVGDTLFMPDYGTARCDFPGGDARTLYRSIARVLALPPDTRLFLCHDYQPGGRDVQFVTTVAEQRRANVHVKDGV TEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGHLPEPENNGVRYLKIPLDAI
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=274, Percent_Identity=30.6569343065693, Blast_Score=108, Evalue=8e-24, Organism=Escherichia coli, GI1787158, Length=170, Percent_Identity=29.4117647058824, Blast_Score=65, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17538952, Length=273, Percent_Identity=27.8388278388278, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI221330176, Length=272, Percent_Identity=29.4117647058824, Blast_Score=109, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 32024; Mature: 31892
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAPALSVEGFFDPATHTVSYLLLDTASRACALIDSVLDYDPKSGRTRTASADRLIARV CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH AELGATVHWLLETHVHADHLSAAPYLKARVGGQIAIGSHVRRVQHVFGTLFNAGPGFAED HHHCCHHEEHHHHHHCHHHHCCCCHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHH SRQFDRLVDDGDTLALGALTIRALHTPGHTPACMTYCVDDATQRAAFVGDTLFMPDYGTA HHHHHHHHCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCE RCDFPGGDARTLYRSIARVLALPPDTRLFLCHDYQPGGRDVQFVTTVAEQRRANVHVKDG ECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECC VTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGHLPEPENNGVRYLKIPLDAI CCCCHHEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure SNAPALSVEGFFDPATHTVSYLLLDTASRACALIDSVLDYDPKSGRTRTASADRLIARV CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH AELGATVHWLLETHVHADHLSAAPYLKARVGGQIAIGSHVRRVQHVFGTLFNAGPGFAED HHHCCHHEEHHHHHHCHHHHCCCCHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHH SRQFDRLVDDGDTLALGALTIRALHTPGHTPACMTYCVDDATQRAAFVGDTLFMPDYGTA HHHHHHHHCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCE RCDFPGGDARTLYRSIARVLALPPDTRLFLCHDYQPGGRDVQFVTTVAEQRRANVHVKDG ECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECC VTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGHLPEPENNGVRYLKIPLDAI CCCCHHEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]