Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
---|---|
Accession | NC_008542 |
Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116689725
Identifier: 116689725
GI number: 116689725
Start: 1889304
End: 1889588
Strand: Reverse
Name: 116689725
Synonym: Bcen2424_1703
Alternate gene names: NA
Gene position: 1889588-1889304 (Counterclockwise)
Preceding gene: 116689727
Following gene: 116689724
Centisome position: 54.24
GC content: 61.4
Gene sequence:
>285_bases ATGCTTCGATCTTCGCGCGGCGCGGCGCGGCGCGTCGAGGCGCCTGGACGCAACGTCGGGCTCCGCTTGGCCGAACAGCG GACGCAACGACGGCGTATCCGGCTCCAGCGCGGCGAGCACCGCGCCAAGCATCTGAACCCCCATCGGCGAGACGGCATCG TCGGGCCAGCGACAACGGGATTAATCAGGTCGGGATCGTCTGAAAGCCCTGCCCTGCAAGGCACGACACGATCCAGATAC ATTGAAATACAAAATATCGTATGCGATTTAATCGAATACGCTTGA
Upstream 100 bases:
>100_bases ATCCGAATAGCGGTATCGTTTGATCGAACTGCATGTTCCGAGGCAGAAGGTTCAGGCCATCAAATCACCAGAAAATCGGC TCCCTCGGTGAGATCGCGCC
Downstream 100 bases:
>100_bases CTCAGGTGGTCGTGAGGCGGAAACTGCGTCGCATGCGATCGAATCGCATCTGAAACAAACCTCAACCGACGGAGTAAATG ATGAGCAAGATCGACAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MLRSSRGAARRVEAPGRNVGLRLAEQRTQRRRIRLQRGEHRAKHLNPHRRDGIVGPATTGLIRSGSSESPALQGTTRSRY IEIQNIVCDLIEYA
Sequences:
>Translated_94_residues MLRSSRGAARRVEAPGRNVGLRLAEQRTQRRRIRLQRGEHRAKHLNPHRRDGIVGPATTGLIRSGSSESPALQGTTRSRY IEIQNIVCDLIEYA >Mature_94_residues MLRSSRGAARRVEAPGRNVGLRLAEQRTQRRRIRLQRGEHRAKHLNPHRRDGIVGPATTGLIRSGSSESPALQGTTRSRY IEIQNIVCDLIEYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10597; Mature: 10597
Theoretical pI: Translated: 12.21; Mature: 12.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSSRGAARRVEAPGRNVGLRLAEQRTQRRRIRLQRGEHRAKHLNPHRRDGIVGPATTG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCH LIRSGSSESPALQGTTRSRYIEIQNIVCDLIEYA HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLRSSRGAARRVEAPGRNVGLRLAEQRTQRRRIRLQRGEHRAKHLNPHRRDGIVGPATTG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCH LIRSGSSESPALQGTTRSRYIEIQNIVCDLIEYA HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA