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The map label for this gene is cirA [H]

Identifier: 116689727

GI number: 116689727

Start: 1891411

End: 1894131

Strand: Reverse

Name: cirA [H]

Synonym: Bcen2424_1705

Alternate gene names: 116689727

Gene position: 1894131-1891411 (Counterclockwise)

Preceding gene: 116689728

Following gene: 116689725

Centisome position: 54.37

GC content: 63.21

Gene sequence:

>2721_bases
ATGAAACCAACGGCTTTGGGATCGGCAATACGCAGCATCGTATGGGCTGAAGTCGCGTTGACGGCGGCTTTGGGTACCTC
CGCTTACGCGCAGACAACGCCTGTCGACGGGAGCGTCGCCGCCGAGCAAACCGGCAGCACGGCCGCCGCCGCGCCCGCGC
CGGCATCGGGCACCGCCGCGGGCGGGCAGACCGTGAAAAAGCTCGACAAGTTCGAAGTGACGGGCTCGCTGATCCGTACA
TCCGACAAGGTCGGTCACACCGAGGTGCAGGTCATCACCGCGAAGGAAATCCAGCAAAGCGGATACACGACGGTTGCCGA
TTTCCTGCGTTCGACCTCGGCCAATTCCGCAAGCAGCTGGGGCCAGACGACGATGAACAGCTCGGCCCCCGGCGGCGCCG
GCATGGCGTTGCGCGGGCTCAGCGAGAAATACACGCTCGTGCTCGTCGATGGCCAGCGCGTCGCGAACTATGCGCAGTCG
GTGAACTTCACCGACACATTCTTCGATGTCAACGCGATCCCGTTGAACATGGTGGAGCGCGTCGAGATCGTCAAGACCGG
CGCGGTATCCGTCTACGGCTCGGACGCGATCGCGGGCGTCGTCAACATCATTACGAAGAAGAACTTTCAGGGCCTGCAGA
TCGACGGCCAACTCGGCAAGGCGCAGCATCCGGGCGACGGGCAGGGCAACTTCAGTGTACTGGCCGGCTTCGGCGACCTG
AATTCGGATCGCTTCAACGTCACCGCGGCCGCCAGCTATTACCGCGATTCGGGCTCGACGCTCGGCGATCGCGACATGAC
GTCGGCGCAAGACTTCACGCAATATCCCGGCGGGCTGGCAGCGCCGCTCGGGCCGAACCAGCAATCGTACTGGTCGCTGG
CGGACGGCTCCAGGGTGCCGCTCTCGCCGTGCCCGCCGGGCAGCAAGACGAGCGCGACCAATTGCACGTACAACCCGGCC
GCGTCGACATCGCTCGTTCCGTCCACGACGCGCCTGAACGCGAAGGTGCGCGCCACCTTCAAGATCGACGACAACACGCA
GGCCTATGCGGGCTTCTGGGTGAGCCGCGATGAAACCGTCCAGTTGCAGGGACCGGCCTCGATCTCGAGCACGACGAACG
TCTACAACCCGTCGACCGGGTCCGTTTCGCCGCTGCCGCGCACCGTACCGGTGAGCAACCCCTATAACCCGTTCGGCGTG
CCGACGGCGATCAACCTGACCTTCCCGGGCAACGTAGTAGGGGCGGACACGGTATCGACGTTCTGGATGGCGAACACGGG
CGTCAAAGGTTCGTTCGACACGGGCAGATTCGGCGCGTGGGACTGGTCGGCCGATTACGGCCACTCGCAGAGCACCGTCG
ATACGACGTATCGCAACCGGATCAACGTCGCGGGCCTCGAGAACATGCTCGCGAACGGCACCTACAACTTCTCGAACCCG
GCCGCCACGCCAAACGGCCTGAACGGCGTTTTCACGGACGACGATCAGCAGGCCATCTCGAAGGTCGACAGCGTGACAGC
CAAGGCCTCGACGTCGAATCTCTTCACGCTGCCCGGGGGCCCGGTCGGCCTGGGCCTGGGCACCGAGTTCCGTCACGAAT
CGTCGACGATCAACCCGCAGACGCTTGCGTCGCAGGGCGTATCCGCACCCGCGAACGTGCAGACGGTGGAGGGTTCGCGC
AACGTCGCCGCCGCGTTTTACCAGGTCGACATTCCGATCCTGCGCAACCTGACGTTCACGCAGGCGGGCCGCTACGATCA
CTACAGCGACTTCGGCGGGGCGTTTTCGCCGAGCTTTGCGCTGCGTTTCCAGCCGGTGCAAATGCTGACGACGTATGCAT
CGTACAGTCGCGGCTTCCGCGCGCCGACCCTCGTCGAAAACTCGCAGGCCGTCTATCTCTCTCACCAGAACCTCGTCGAT
CCGAACGATCCGAGCGGTGTGCCGACCAAGCACTTCACGACGGAGCAAGTCGCGGGCAATCCGAATCTTCAGCCCGAGCA
CACGAAGAACTACAACATCGGCTTCCAGCTTTCACCCGATGCGATGACCGATATCGGTGCGGCGTTCTACAAGGTCCGCA
TCGACGGCGTCATCGGTACCGACGATCCGAACGCGGTGCTCGTCGCCAACGATCCTTCCCGTGTCGTGCGCAACGCCGAC
GGGTCGGTGCGTTACCTCGTTCAGCATTTCGTGAACCTAGGTGCGCTCGACACTGATGGCTTCGATCTCAATTTCCGCAA
AGCGCTGCGTACCAAGTACGGCACGTTCACGCTCGCAGGCGACTGGACTTATGTGTGGCACTTCAAGCTGCACAGCCCCG
GAACCGCACCGCAGGACTTCGCCGGCAACAACCTTGCGCTGCTGCAGCCGTTCGGCGCGAGCAACCCGCGCTGGAAGGGC
AATACGAGCGTGAGCTGGGACTACCGGCAACTGACCACCACGCTGACCTGGCAATACACGGGGCCATATACGAACGCCGT
GGCCGCGGAATTCGGCGACGGCGGTACGGGATCGGTGGCGTCGTACAGCCAGTTCAACCTCATGTTCAACTATCGCGGTT
TCAAGCATTGGACGATTTACGGCGGCATCACGAACCTCTTCGACAAGAAGCCGCCGTTCGACGTCGAGTGGCAAGCCGTG
CCCGACATCACTGGCTATGACCAGTCGCTCTACACGAACCTTGGTCGTTTCTTCCAGGTCGGGGCGACGTACCGGTTCTG
A

Upstream 100 bases:

>100_bases
CGCCAGACGACGAATCAGGAACGCGGGGCAACGCTATTTAAAGGCCGGCGAATCTCCGTGCATACAAAAAGGTGAGGCCT
TGCGACGACAGAGGGGTGTT

Downstream 100 bases:

>100_bases
CAGGGAGGAAGCCGCCAGGTGGCAACCGGTCCCGGCGCGCGGCCCGCGCCGGGACGACGAAGAACGAGCTGGACCGGCAG
CCGGCCTCAATCAAGGTCAA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 906; Mature: 906

Protein sequence:

>906_residues
MKPTALGSAIRSIVWAEVALTAALGTSAYAQTTPVDGSVAAEQTGSTAAAAPAPASGTAAGGQTVKKLDKFEVTGSLIRT
SDKVGHTEVQVITAKEIQQSGYTTVADFLRSTSANSASSWGQTTMNSSAPGGAGMALRGLSEKYTLVLVDGQRVANYAQS
VNFTDTFFDVNAIPLNMVERVEIVKTGAVSVYGSDAIAGVVNIITKKNFQGLQIDGQLGKAQHPGDGQGNFSVLAGFGDL
NSDRFNVTAAASYYRDSGSTLGDRDMTSAQDFTQYPGGLAAPLGPNQQSYWSLADGSRVPLSPCPPGSKTSATNCTYNPA
ASTSLVPSTTRLNAKVRATFKIDDNTQAYAGFWVSRDETVQLQGPASISSTTNVYNPSTGSVSPLPRTVPVSNPYNPFGV
PTAINLTFPGNVVGADTVSTFWMANTGVKGSFDTGRFGAWDWSADYGHSQSTVDTTYRNRINVAGLENMLANGTYNFSNP
AATPNGLNGVFTDDDQQAISKVDSVTAKASTSNLFTLPGGPVGLGLGTEFRHESSTINPQTLASQGVSAPANVQTVEGSR
NVAAAFYQVDIPILRNLTFTQAGRYDHYSDFGGAFSPSFALRFQPVQMLTTYASYSRGFRAPTLVENSQAVYLSHQNLVD
PNDPSGVPTKHFTTEQVAGNPNLQPEHTKNYNIGFQLSPDAMTDIGAAFYKVRIDGVIGTDDPNAVLVANDPSRVVRNAD
GSVRYLVQHFVNLGALDTDGFDLNFRKALRTKYGTFTLAGDWTYVWHFKLHSPGTAPQDFAGNNLALLQPFGASNPRWKG
NTSVSWDYRQLTTTLTWQYTGPYTNAVAAEFGDGGTGSVASYSQFNLMFNYRGFKHWTIYGGITNLFDKKPPFDVEWQAV
PDITGYDQSLYTNLGRFFQVGATYRF

Sequences:

>Translated_906_residues
MKPTALGSAIRSIVWAEVALTAALGTSAYAQTTPVDGSVAAEQTGSTAAAAPAPASGTAAGGQTVKKLDKFEVTGSLIRT
SDKVGHTEVQVITAKEIQQSGYTTVADFLRSTSANSASSWGQTTMNSSAPGGAGMALRGLSEKYTLVLVDGQRVANYAQS
VNFTDTFFDVNAIPLNMVERVEIVKTGAVSVYGSDAIAGVVNIITKKNFQGLQIDGQLGKAQHPGDGQGNFSVLAGFGDL
NSDRFNVTAAASYYRDSGSTLGDRDMTSAQDFTQYPGGLAAPLGPNQQSYWSLADGSRVPLSPCPPGSKTSATNCTYNPA
ASTSLVPSTTRLNAKVRATFKIDDNTQAYAGFWVSRDETVQLQGPASISSTTNVYNPSTGSVSPLPRTVPVSNPYNPFGV
PTAINLTFPGNVVGADTVSTFWMANTGVKGSFDTGRFGAWDWSADYGHSQSTVDTTYRNRINVAGLENMLANGTYNFSNP
AATPNGLNGVFTDDDQQAISKVDSVTAKASTSNLFTLPGGPVGLGLGTEFRHESSTINPQTLASQGVSAPANVQTVEGSR
NVAAAFYQVDIPILRNLTFTQAGRYDHYSDFGGAFSPSFALRFQPVQMLTTYASYSRGFRAPTLVENSQAVYLSHQNLVD
PNDPSGVPTKHFTTEQVAGNPNLQPEHTKNYNIGFQLSPDAMTDIGAAFYKVRIDGVIGTDDPNAVLVANDPSRVVRNAD
GSVRYLVQHFVNLGALDTDGFDLNFRKALRTKYGTFTLAGDWTYVWHFKLHSPGTAPQDFAGNNLALLQPFGASNPRWKG
NTSVSWDYRQLTTTLTWQYTGPYTNAVAAEFGDGGTGSVASYSQFNLMFNYRGFKHWTIYGGITNLFDKKPPFDVEWQAV
PDITGYDQSLYTNLGRFFQVGATYRF
>Mature_906_residues
MKPTALGSAIRSIVWAEVALTAALGTSAYAQTTPVDGSVAAEQTGSTAAAAPAPASGTAAGGQTVKKLDKFEVTGSLIRT
SDKVGHTEVQVITAKEIQQSGYTTVADFLRSTSANSASSWGQTTMNSSAPGGAGMALRGLSEKYTLVLVDGQRVANYAQS
VNFTDTFFDVNAIPLNMVERVEIVKTGAVSVYGSDAIAGVVNIITKKNFQGLQIDGQLGKAQHPGDGQGNFSVLAGFGDL
NSDRFNVTAAASYYRDSGSTLGDRDMTSAQDFTQYPGGLAAPLGPNQQSYWSLADGSRVPLSPCPPGSKTSATNCTYNPA
ASTSLVPSTTRLNAKVRATFKIDDNTQAYAGFWVSRDETVQLQGPASISSTTNVYNPSTGSVSPLPRTVPVSNPYNPFGV
PTAINLTFPGNVVGADTVSTFWMANTGVKGSFDTGRFGAWDWSADYGHSQSTVDTTYRNRINVAGLENMLANGTYNFSNP
AATPNGLNGVFTDDDQQAISKVDSVTAKASTSNLFTLPGGPVGLGLGTEFRHESSTINPQTLASQGVSAPANVQTVEGSR
NVAAAFYQVDIPILRNLTFTQAGRYDHYSDFGGAFSPSFALRFQPVQMLTTYASYSRGFRAPTLVENSQAVYLSHQNLVD
PNDPSGVPTKHFTTEQVAGNPNLQPEHTKNYNIGFQLSPDAMTDIGAAFYKVRIDGVIGTDDPNAVLVANDPSRVVRNAD
GSVRYLVQHFVNLGALDTDGFDLNFRKALRTKYGTFTLAGDWTYVWHFKLHSPGTAPQDFAGNNLALLQPFGASNPRWKG
NTSVSWDYRQLTTTLTWQYTGPYTNAVAAEFGDGGTGSVASYSQFNLMFNYRGFKHWTIYGGITNLFDKKPPFDVEWQAV
PDITGYDQSLYTNLGRFFQVGATYRF

Specific function: Not yet known. Postulated to participate in iron transport. Outer membrane receptor for colicins IA and IB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=135, Percent_Identity=35.5555555555556, Blast_Score=87, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 96846; Mature: 96846

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00116 DNA_POLYMERASE_B ; PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTALGSAIRSIVWAEVALTAALGTSAYAQTTPVDGSVAAEQTGSTAAAAPAPASGTAA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGQTVKKLDKFEVTGSLIRTSDKVGHTEVQVITAKEIQQSGYTTVADFLRSTSANSASSW
CCHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEHHHHHHCCCHHHHHHHHHCCCCCCCCC
GQTTMNSSAPGGAGMALRGLSEKYTLVLVDGQRVANYAQSVNFTDTFFDVNAIPLNMVER
CCCCCCCCCCCCCCCEEECCCCCEEEEEECCHHHHHHHHCCCCCEEEEECCCCCCCHHHH
VEIVKTGAVSVYGSDAIAGVVNIITKKNFQGLQIDGQLGKAQHPGDGQGNFSVLAGFGDL
EEEEECCEEEEECCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCC
NSDRFNVTAAASYYRDSGSTLGDRDMTSAQDFTQYPGGLAAPLGPNQQSYWSLADGSRVP
CCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCEEEECCCCCCC
LSPCPPGSKTSATNCTYNPAASTSLVPSTTRLNAKVRATFKIDDNTQAYAGFWVSRDETV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEEEECCCCCEEEEEEECCCCEE
QLQGPASISSTTNVYNPSTGSVSPLPRTVPVSNPYNPFGVPTAINLTFPGNVVGADTVST
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCHHEE
FWMANTGVKGSFDTGRFGAWDWSADYGHSQSTVDTTYRNRINVAGLENMLANGTYNFSNP
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEHHHHHHHHCCCCCCCCC
AATPNGLNGVFTDDDQQAISKVDSVTAKASTSNLFTLPGGPVGLGLGTEFRHESSTINPQ
CCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCEEECCCCCEEECCCCCCCCCCCCCCHH
TLASQGVSAPANVQTVEGSRNVAAAFYQVDIPILRNLTFTQAGRYDHYSDFGGAFSPSFA
HHHHCCCCCCCCEEEECCCCCEEEEEEEECCHHHCCCEECCCCCCCCCCCCCCCCCCCEE
LRFQPVQMLTTYASYSRGFRAPTLVENSQAVYLSHQNLVDPNDPSGVPTKHFTTEQVAGN
EEECHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCC
PNLQPEHTKNYNIGFQLSPDAMTDIGAAFYKVRIDGVIGTDDPNAVLVANDPSRVVRNAD
CCCCCCCCCCCCEEEEECCHHHHHHCCEEEEEEEEEEEECCCCCEEEEECCHHHHHHCCC
GSVRYLVQHFVNLGALDTDGFDLNFRKALRTKYGTFTLAGDWTYVWHFKLHSPGTAPQDF
CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEECCEEEEEEEEECCCCCCCCCC
AGNNLALLQPFGASNPRWKGNTSVSWDYRQLTTTLTWQYTGPYTNAVAAEFGDGGTGSVA
CCCCEEEEECCCCCCCCCCCCCCEEEEHEEEEEEEEEEECCCCCCCHHEECCCCCCCCCC
SYSQFNLMFNYRGFKHWTIYGGITNLFDKKPPFDVEWQAVPDITGYDQSLYTNLGRFFQV
CCEEEEEEEEECCEEEEEEECCHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHEEC
GATYRF
CCEECC
>Mature Secondary Structure
MKPTALGSAIRSIVWAEVALTAALGTSAYAQTTPVDGSVAAEQTGSTAAAAPAPASGTAA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGQTVKKLDKFEVTGSLIRTSDKVGHTEVQVITAKEIQQSGYTTVADFLRSTSANSASSW
CCHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEHHHHHHCCCHHHHHHHHHCCCCCCCCC
GQTTMNSSAPGGAGMALRGLSEKYTLVLVDGQRVANYAQSVNFTDTFFDVNAIPLNMVER
CCCCCCCCCCCCCCCEEECCCCCEEEEEECCHHHHHHHHCCCCCEEEEECCCCCCCHHHH
VEIVKTGAVSVYGSDAIAGVVNIITKKNFQGLQIDGQLGKAQHPGDGQGNFSVLAGFGDL
EEEEECCEEEEECCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCC
NSDRFNVTAAASYYRDSGSTLGDRDMTSAQDFTQYPGGLAAPLGPNQQSYWSLADGSRVP
CCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCEEEECCCCCCC
LSPCPPGSKTSATNCTYNPAASTSLVPSTTRLNAKVRATFKIDDNTQAYAGFWVSRDETV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEEEECCCCCEEEEEEECCCCEE
QLQGPASISSTTNVYNPSTGSVSPLPRTVPVSNPYNPFGVPTAINLTFPGNVVGADTVST
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCHHEE
FWMANTGVKGSFDTGRFGAWDWSADYGHSQSTVDTTYRNRINVAGLENMLANGTYNFSNP
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEHHHHHHHHCCCCCCCCC
AATPNGLNGVFTDDDQQAISKVDSVTAKASTSNLFTLPGGPVGLGLGTEFRHESSTINPQ
CCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCEEECCCCCEEECCCCCCCCCCCCCCHH
TLASQGVSAPANVQTVEGSRNVAAAFYQVDIPILRNLTFTQAGRYDHYSDFGGAFSPSFA
HHHHCCCCCCCCEEEECCCCCEEEEEEEECCHHHCCCEECCCCCCCCCCCCCCCCCCCEE
LRFQPVQMLTTYASYSRGFRAPTLVENSQAVYLSHQNLVDPNDPSGVPTKHFTTEQVAGN
EEECHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCC
PNLQPEHTKNYNIGFQLSPDAMTDIGAAFYKVRIDGVIGTDDPNAVLVANDPSRVVRNAD
CCCCCCCCCCCCEEEEECCHHHHHHCCEEEEEEEEEEEECCCCCEEEEECCHHHHHHCCC
GSVRYLVQHFVNLGALDTDGFDLNFRKALRTKYGTFTLAGDWTYVWHFKLHSPGTAPQDF
CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEECCEEEEEEEEECCCCCCCCCC
AGNNLALLQPFGASNPRWKGNTSVSWDYRQLTTTLTWQYTGPYTNAVAAEFGDGGTGSVA
CCCCEEEEECCCCCCCCCCCCCCEEEEHEEEEEEEEEEECCCCCCCHHEECCCCCCCCCC
SYSQFNLMFNYRGFKHWTIYGGITNLFDKKPPFDVEWQAVPDITGYDQSLYTNLGRFFQV
CCEEEEEEEEECCEEEEEEECCHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHEEC
GATYRF
CCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2644220; 9278503; 3316180; 1315732; 2160948 [H]