Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is osmC [C]
Identifier: 116689724
GI number: 116689724
Start: 1888804
End: 1889223
Strand: Reverse
Name: osmC [C]
Synonym: Bcen2424_1702
Alternate gene names: 116689724
Gene position: 1889223-1888804 (Counterclockwise)
Preceding gene: 116689725
Following gene: 116689723
Centisome position: 54.23
GC content: 68.81
Gene sequence:
>420_bases ATGAGCAAGATCGACAAAGTGCTGTACACGGGCAAGACGCATACGACTTCCGGCGGCCGCGACGGCGCCGCGCGCAGTTC CGATGGCCGCCTCGACATCCAGTTGTCGTCGCCGGGAAGCGCGGGCACCGGCACCAACCCGGAACAGCTGTTCGCGGCCG GCTGGTCGGCCTGCTTCATCGGCGCGATGCAGCTTGCGGCGCGTGCCGCGAAGGTGACGCTGCCGGCCGATCTCGCGGTC GACGCCGAAGTGGACCTCGGCACGGCGGGCAACGCGTACTTCCTGCAAGCCCGGCTGAACGTGAGCGTGCCGGGGCTCGA GCGCGACGTCGCGCAACGCATCGTCGACGCCGCGCACCAGACTTGCCCGTATTCGAAGGCGACGCGCGGCAACATCGACG TCGAGATCCGGATCGCCTGA
Upstream 100 bases:
>100_bases ATTTAATCGAATACGCTTGACTCAGGTGGTCGTGAGGCGGAAACTGCGTCGCATGCGATCGAATCGCATCTGAAACAAAC CTCAACCGACGGAGTAAATG
Downstream 100 bases:
>100_bases ACGTTGCACCGGGCGGCTGAGCGCCCCCGCTCGAATTCCCGATTCCTTTTCCATCGAGGTGAAACATGAAAACCCAATTG ATCGCTGCCCTGTTCGTCGC
Product: OsmC family protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSKIDKVLYTGKTHTTSGGRDGAARSSDGRLDIQLSSPGSAGTGTNPEQLFAAGWSACFIGAMQLAARAAKVTLPADLAV DAEVDLGTAGNAYFLQARLNVSVPGLERDVAQRIVDAAHQTCPYSKATRGNIDVEIRIA
Sequences:
>Translated_139_residues MSKIDKVLYTGKTHTTSGGRDGAARSSDGRLDIQLSSPGSAGTGTNPEQLFAAGWSACFIGAMQLAARAAKVTLPADLAV DAEVDLGTAGNAYFLQARLNVSVPGLERDVAQRIVDAAHQTCPYSKATRGNIDVEIRIA >Mature_138_residues SKIDKVLYTGKTHTTSGGRDGAARSSDGRLDIQLSSPGSAGTGTNPEQLFAAGWSACFIGAMQLAARAAKVTLPADLAVD AEVDLGTAGNAYFLQARLNVSVPGLERDVAQRIVDAAHQTCPYSKATRGNIDVEIRIA
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
None
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR019953 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 14476; Mature: 14345
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIDKVLYTGKTHTTSGGRDGAARSSDGRLDIQLSSPGSAGTGTNPEQLFAAGWSACFI CCCHHCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCHHHHHH GAMQLAARAAKVTLPADLAVDAEVDLGTAGNAYFLQARLNVSVPGLERDVAQRIVDAAHQ HHHHHHHHHHEEECCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHH TCPYSKATRGNIDVEIRIA CCCCCCCCCCCCEEEEEEC >Mature Secondary Structure SKIDKVLYTGKTHTTSGGRDGAARSSDGRLDIQLSSPGSAGTGTNPEQLFAAGWSACFI CCHHCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCHHHHHH GAMQLAARAAKVTLPADLAVDAEVDLGTAGNAYFLQARLNVSVPGLERDVAQRIVDAAHQ HHHHHHHHHHEEECCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHH TCPYSKATRGNIDVEIRIA CCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9226277 [H]