Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689705

Identifier: 116689705

GI number: 116689705

Start: 1871247

End: 1872506

Strand: Direct

Name: 116689705

Synonym: Bcen2424_1683

Alternate gene names: NA

Gene position: 1871247-1872506 (Clockwise)

Preceding gene: 116689703

Following gene: 116689706

Centisome position: 53.71

GC content: 62.7

Gene sequence:

>1260_bases
ATGCCACGCAAACGCAAGGAAGAAGTGACGATAGAACCGGGCAAGGGCTTGAACCTGGACCCCGAGCTGATCAAGCAACT
GGTGCCCGGGACGCTGAACCGGGCGACGATCAACGAGCAGCTTGCGGCGCTCAAGAAGGCAATCTTCGAACGCGCGCTGG
GCGGCGAACTGACCCACCACCTCGGCTACGAGAAGGGCGATGCCAAGCCGGCAGGCCGCACGAACCACCGCAACGGCACC
AGCCGCAAGCGCATCACGACCGACGACGACCTGCTCGACGTCGAGATTCCGCGCGACCGCGAAGGCACCTTCGATCCGGT
GCTGATCGCCAAGGGCGAGCGACGCTTCACCGGCTTTGACGACAAGATCATCGCGATGTACGCACGCGGCATGAGCGTGC
GGGAGATTCAGGGTTTCCTGCTGGAGATGTACGGCATCGAGGTGTCGCCGGACTTCATCAGTACGGTGACCGATTCCGTG
ATCGACGAAGTGCGCGAATGGCAGCAGCGGCCGCTCGAGCCGATGTACCCGGTCGTGTTCTTCGACGCCTTGCGAGTCAA
GATCCGCGACGAAGGCGTCGTGCGCAACAAAGCGATCTACCTGGCGCTGGGCGTGCGCCGCGACGGCACACGCGACGTGT
TGGGCCTTTGGATCGAGCAGACCGAGGGGGCCAAGTTCTGGCTGAGGGTAGTGAACGACCTTAAGCTGCGCGGCGTGCAG
GATATCCTGATCGCCGTGGTCGACGGCCTGAAGGGCTTCCCGGAAGCGATCAACACGGTGTTCCCGGAAACGACGGTCCA
GACCTGCATCGTGCATCTGATCCGGAACTCACTGGACTTCGCCAGCTGGAAAGACAGGAAATCGGTCGCAGCGGCGCTCA
AGGAGGTCTATCGGGCACCGTCGGCCGAAGCGGCCGCCGTGGCGCTGGACGCGTTCGATACGAGCCCGTGGGGTGCGAAA
TACCCTCCGATCGCCGCGCTCTGGCGCCGAGCCTGGGATCAGGTGATTCCGTTCTACGCCTTCGCGCCTGACATCCGGAA
AATTGTATATACGACCAACGCGATCGAGTCGCTGCACATGCAGCTTCGGAAGATCATCAAGGCGCGCGGCCACTTCCCGT
CGGACGAGGCCGCGCTCAAACTGATCTGGCTGGCGCTGCGCAACGTCGTGGCCAAGTGGACTGGCTCCCGGCACGATTGG
AAGAGCGCGATGACGCAGTTCGCACTGCTTTACCCGGAACGATTCAACATTGGAGTCTGA

Upstream 100 bases:

>100_bases
CGCCGCTCACGGTGCCGCAAGACACGGCGGGCAACGTATCTCCGGAGCCTATCCGAATGTTTGTGTGTGAGGCATAAACT
GATGGCCAAGGAGCCACGTT

Downstream 100 bases:

>100_bases
ATCTCAACCCGCCTCACACACGGAATTCCGGATACCTCCTATCTCCGGCGGCCGCCGGACCGCATACGGCCCGACGGGTT
CCGCCTCCCACCGAGATACG

Product: transposase, mutator type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MPRKRKEEVTIEPGKGLNLDPELIKQLVPGTLNRATINEQLAALKKAIFERALGGELTHHLGYEKGDAKPAGRTNHRNGT
SRKRITTDDDLLDVEIPRDREGTFDPVLIAKGERRFTGFDDKIIAMYARGMSVREIQGFLLEMYGIEVSPDFISTVTDSV
IDEVREWQQRPLEPMYPVVFFDALRVKIRDEGVVRNKAIYLALGVRRDGTRDVLGLWIEQTEGAKFWLRVVNDLKLRGVQ
DILIAVVDGLKGFPEAINTVFPETTVQTCIVHLIRNSLDFASWKDRKSVAAALKEVYRAPSAEAAAVALDAFDTSPWGAK
YPPIAALWRRAWDQVIPFYAFAPDIRKIVYTTNAIESLHMQLRKIIKARGHFPSDEAALKLIWLALRNVVAKWTGSRHDW
KSAMTQFALLYPERFNIGV

Sequences:

>Translated_419_residues
MPRKRKEEVTIEPGKGLNLDPELIKQLVPGTLNRATINEQLAALKKAIFERALGGELTHHLGYEKGDAKPAGRTNHRNGT
SRKRITTDDDLLDVEIPRDREGTFDPVLIAKGERRFTGFDDKIIAMYARGMSVREIQGFLLEMYGIEVSPDFISTVTDSV
IDEVREWQQRPLEPMYPVVFFDALRVKIRDEGVVRNKAIYLALGVRRDGTRDVLGLWIEQTEGAKFWLRVVNDLKLRGVQ
DILIAVVDGLKGFPEAINTVFPETTVQTCIVHLIRNSLDFASWKDRKSVAAALKEVYRAPSAEAAAVALDAFDTSPWGAK
YPPIAALWRRAWDQVIPFYAFAPDIRKIVYTTNAIESLHMQLRKIIKARGHFPSDEAALKLIWLALRNVVAKWTGSRHDW
KSAMTQFALLYPERFNIGV
>Mature_418_residues
PRKRKEEVTIEPGKGLNLDPELIKQLVPGTLNRATINEQLAALKKAIFERALGGELTHHLGYEKGDAKPAGRTNHRNGTS
RKRITTDDDLLDVEIPRDREGTFDPVLIAKGERRFTGFDDKIIAMYARGMSVREIQGFLLEMYGIEVSPDFISTVTDSVI
DEVREWQQRPLEPMYPVVFFDALRVKIRDEGVVRNKAIYLALGVRRDGTRDVLGLWIEQTEGAKFWLRVVNDLKLRGVQD
ILIAVVDGLKGFPEAINTVFPETTVQTCIVHLIRNSLDFASWKDRKSVAAALKEVYRAPSAEAAAVALDAFDTSPWGAKY
PPIAALWRRAWDQVIPFYAFAPDIRKIVYTTNAIESLHMQLRKIIKARGHFPSDEAALKLIWLALRNVVAKWTGSRHDWK
SAMTQFALLYPERFNIGV

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 47448; Mature: 47317

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKRKEEVTIEPGKGLNLDPELIKQLVPGTLNRATINEQLAALKKAIFERALGGELTHH
CCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
LGYEKGDAKPAGRTNHRNGTSRKRITTDDDLLDVEIPRDREGTFDPVLIAKGERRFTGFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCC
DKIIAMYARGMSVREIQGFLLEMYGIEVSPDFISTVTDSVIDEVREWQQRPLEPMYPVVF
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
FDALRVKIRDEGVVRNKAIYLALGVRRDGTRDVLGLWIEQTEGAKFWLRVVNDLKLRGVQ
HHHHHEEECCCCCEECCEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHH
DILIAVVDGLKGFPEAINTVFPETTVQTCIVHLIRNSLDFASWKDRKSVAAALKEVYRAP
HHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCCC
SAEAAAVALDAFDTSPWGAKYPPIAALWRRAWDQVIPFYAFAPDIRKIVYTTNAIESLHM
CCCHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHH
QLRKIIKARGHFPSDEAALKLIWLALRNVVAKWTGSRHDWKSAMTQFALLYPERFNIGV
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PRKRKEEVTIEPGKGLNLDPELIKQLVPGTLNRATINEQLAALKKAIFERALGGELTHH
CCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
LGYEKGDAKPAGRTNHRNGTSRKRITTDDDLLDVEIPRDREGTFDPVLIAKGERRFTGFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCC
DKIIAMYARGMSVREIQGFLLEMYGIEVSPDFISTVTDSVIDEVREWQQRPLEPMYPVVF
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
FDALRVKIRDEGVVRNKAIYLALGVRRDGTRDVLGLWIEQTEGAKFWLRVVNDLKLRGVQ
HHHHHEEECCCCCEECCEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHH
DILIAVVDGLKGFPEAINTVFPETTVQTCIVHLIRNSLDFASWKDRKSVAAALKEVYRAP
HHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCCC
SAEAAAVALDAFDTSPWGAKYPPIAALWRRAWDQVIPFYAFAPDIRKIVYTTNAIESLHM
CCCHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHH
QLRKIIKARGHFPSDEAALKLIWLALRNVVAKWTGSRHDWKSAMTQFALLYPERFNIGV
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]