Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689703

Identifier: 116689703

GI number: 116689703

Start: 1868762

End: 1869472

Strand: Direct

Name: 116689703

Synonym: Bcen2424_1681

Alternate gene names: NA

Gene position: 1868762-1869472 (Clockwise)

Preceding gene: 116689702

Following gene: 116689705

Centisome position: 53.64

GC content: 50.91

Gene sequence:

>711_bases
ATGTTCCGACTCAACCCACTTCCCCGGAGCTTTGTAGTGGCGACACTAGCTGAATTTGCCAGTACGTTCGATCTAAATAG
TCTCTCAGCCGACTGGATGGAGACGTCCATGTGGGGATGGATAAGGACACGCACAGAGCCCGTTTCCGCTCGTCAGTATC
TGAGATTTGCCGAGCTTGACATTGAGGAAGGTGACACTCCTCGGCATCTCGTCAATGGGATCACCAACGCGAAACGGGCG
TTGCATCTCCGCATGGAGGATATTTGTAATGGATTCGGTTTCGACAAGCTGGGTGGCTCAAGAAGTTTTCCCAGCATGGT
CAAATTCATTTCATCGCTTGGAATTACTGCGCCACGCTTGCTCGTTCGACTTAATAAGCTGAGAAACGAAGTAGAGCATG
ACTATGTATTACCTGCCCGTCAGGATGTCGAGACATTTCTCGATGTGGCGAGTCTGTTTGTCGCTGCCACCGATAGGTGG
GTGGATAGGCAGCCGTGCGAGGCCGAAAGTTTTCGGAATACAGGATCAGTCGGCGAAGGCTTTGAGTTGGCGAACATGAG
ATTTGACTGGGAGCGCGGAACGGTAAAACTGGACTTCCGAGAAATCGGTTCAGGATTGACCGGGCCACGCGTGACCACTG
AGTTTCATATCCCATCTGATGAATTTTTCATATGTGCAAGATTCGCCGTTGAATTGGATGGCGTGCGTTGA

Upstream 100 bases:

>100_bases
GGACTTCGAGCAGTCCCGTGCGGGCCGCTGGTAAACTCGGGGAATTGCCGACCACCATCTCCAACAGCTGGCCGGACGGC
AAACTTCGAGCAGTCCCGAA

Downstream 100 bases:

>100_bases
TTGTGAGTAAAGGCGCAAGGAAATCAGCACCGGCATACTAAGCGTCGGCTGCCTGCGATTGCGGTCATTTAGCGAACTAC
GATGATATCTGAGTCACATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MFRLNPLPRSFVVATLAEFASTFDLNSLSADWMETSMWGWIRTRTEPVSARQYLRFAELDIEEGDTPRHLVNGITNAKRA
LHLRMEDICNGFGFDKLGGSRSFPSMVKFISSLGITAPRLLVRLNKLRNEVEHDYVLPARQDVETFLDVASLFVAATDRW
VDRQPCEAESFRNTGSVGEGFELANMRFDWERGTVKLDFREIGSGLTGPRVTTEFHIPSDEFFICARFAVELDGVR

Sequences:

>Translated_236_residues
MFRLNPLPRSFVVATLAEFASTFDLNSLSADWMETSMWGWIRTRTEPVSARQYLRFAELDIEEGDTPRHLVNGITNAKRA
LHLRMEDICNGFGFDKLGGSRSFPSMVKFISSLGITAPRLLVRLNKLRNEVEHDYVLPARQDVETFLDVASLFVAATDRW
VDRQPCEAESFRNTGSVGEGFELANMRFDWERGTVKLDFREIGSGLTGPRVTTEFHIPSDEFFICARFAVELDGVR
>Mature_236_residues
MFRLNPLPRSFVVATLAEFASTFDLNSLSADWMETSMWGWIRTRTEPVSARQYLRFAELDIEEGDTPRHLVNGITNAKRA
LHLRMEDICNGFGFDKLGGSRSFPSMVKFISSLGITAPRLLVRLNKLRNEVEHDYVLPARQDVETFLDVASLFVAATDRW
VDRQPCEAESFRNTGSVGEGFELANMRFDWERGTVKLDFREIGSGLTGPRVTTEFHIPSDEFFICARFAVELDGVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26850; Mature: 26850

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLNPLPRSFVVATLAEFASTFDLNSLSADWMETSMWGWIRTRTEPVSARQYLRFAELD
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
IEEGDTPRHLVNGITNAKRALHLRMEDICNGFGFDKLGGSRSFPSMVKFISSLGITAPRL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
LVRLNKLRNEVEHDYVLPARQDVETFLDVASLFVAATDRWVDRQPCEAESFRNTGSVGEG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCC
FELANMRFDWERGTVKLDFREIGSGLTGPRVTTEFHIPSDEFFICARFAVELDGVR
EEECCEEEECCCCCEEEEHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCC
>Mature Secondary Structure
MFRLNPLPRSFVVATLAEFASTFDLNSLSADWMETSMWGWIRTRTEPVSARQYLRFAELD
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
IEEGDTPRHLVNGITNAKRALHLRMEDICNGFGFDKLGGSRSFPSMVKFISSLGITAPRL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
LVRLNKLRNEVEHDYVLPARQDVETFLDVASLFVAATDRWVDRQPCEAESFRNTGSVGEG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCC
FELANMRFDWERGTVKLDFREIGSGLTGPRVTTEFHIPSDEFFICARFAVELDGVR
EEECCEEEECCCCCEEEEHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA