Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689703
Identifier: 116689703
GI number: 116689703
Start: 1868762
End: 1869472
Strand: Direct
Name: 116689703
Synonym: Bcen2424_1681
Alternate gene names: NA
Gene position: 1868762-1869472 (Clockwise)
Preceding gene: 116689702
Following gene: 116689705
Centisome position: 53.64
GC content: 50.91
Gene sequence:
>711_bases ATGTTCCGACTCAACCCACTTCCCCGGAGCTTTGTAGTGGCGACACTAGCTGAATTTGCCAGTACGTTCGATCTAAATAG TCTCTCAGCCGACTGGATGGAGACGTCCATGTGGGGATGGATAAGGACACGCACAGAGCCCGTTTCCGCTCGTCAGTATC TGAGATTTGCCGAGCTTGACATTGAGGAAGGTGACACTCCTCGGCATCTCGTCAATGGGATCACCAACGCGAAACGGGCG TTGCATCTCCGCATGGAGGATATTTGTAATGGATTCGGTTTCGACAAGCTGGGTGGCTCAAGAAGTTTTCCCAGCATGGT CAAATTCATTTCATCGCTTGGAATTACTGCGCCACGCTTGCTCGTTCGACTTAATAAGCTGAGAAACGAAGTAGAGCATG ACTATGTATTACCTGCCCGTCAGGATGTCGAGACATTTCTCGATGTGGCGAGTCTGTTTGTCGCTGCCACCGATAGGTGG GTGGATAGGCAGCCGTGCGAGGCCGAAAGTTTTCGGAATACAGGATCAGTCGGCGAAGGCTTTGAGTTGGCGAACATGAG ATTTGACTGGGAGCGCGGAACGGTAAAACTGGACTTCCGAGAAATCGGTTCAGGATTGACCGGGCCACGCGTGACCACTG AGTTTCATATCCCATCTGATGAATTTTTCATATGTGCAAGATTCGCCGTTGAATTGGATGGCGTGCGTTGA
Upstream 100 bases:
>100_bases GGACTTCGAGCAGTCCCGTGCGGGCCGCTGGTAAACTCGGGGAATTGCCGACCACCATCTCCAACAGCTGGCCGGACGGC AAACTTCGAGCAGTCCCGAA
Downstream 100 bases:
>100_bases TTGTGAGTAAAGGCGCAAGGAAATCAGCACCGGCATACTAAGCGTCGGCTGCCTGCGATTGCGGTCATTTAGCGAACTAC GATGATATCTGAGTCACATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MFRLNPLPRSFVVATLAEFASTFDLNSLSADWMETSMWGWIRTRTEPVSARQYLRFAELDIEEGDTPRHLVNGITNAKRA LHLRMEDICNGFGFDKLGGSRSFPSMVKFISSLGITAPRLLVRLNKLRNEVEHDYVLPARQDVETFLDVASLFVAATDRW VDRQPCEAESFRNTGSVGEGFELANMRFDWERGTVKLDFREIGSGLTGPRVTTEFHIPSDEFFICARFAVELDGVR
Sequences:
>Translated_236_residues MFRLNPLPRSFVVATLAEFASTFDLNSLSADWMETSMWGWIRTRTEPVSARQYLRFAELDIEEGDTPRHLVNGITNAKRA LHLRMEDICNGFGFDKLGGSRSFPSMVKFISSLGITAPRLLVRLNKLRNEVEHDYVLPARQDVETFLDVASLFVAATDRW VDRQPCEAESFRNTGSVGEGFELANMRFDWERGTVKLDFREIGSGLTGPRVTTEFHIPSDEFFICARFAVELDGVR >Mature_236_residues MFRLNPLPRSFVVATLAEFASTFDLNSLSADWMETSMWGWIRTRTEPVSARQYLRFAELDIEEGDTPRHLVNGITNAKRA LHLRMEDICNGFGFDKLGGSRSFPSMVKFISSLGITAPRLLVRLNKLRNEVEHDYVLPARQDVETFLDVASLFVAATDRW VDRQPCEAESFRNTGSVGEGFELANMRFDWERGTVKLDFREIGSGLTGPRVTTEFHIPSDEFFICARFAVELDGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26850; Mature: 26850
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLNPLPRSFVVATLAEFASTFDLNSLSADWMETSMWGWIRTRTEPVSARQYLRFAELD CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC IEEGDTPRHLVNGITNAKRALHLRMEDICNGFGFDKLGGSRSFPSMVKFISSLGITAPRL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH LVRLNKLRNEVEHDYVLPARQDVETFLDVASLFVAATDRWVDRQPCEAESFRNTGSVGEG HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCC FELANMRFDWERGTVKLDFREIGSGLTGPRVTTEFHIPSDEFFICARFAVELDGVR EEECCEEEECCCCCEEEEHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCC >Mature Secondary Structure MFRLNPLPRSFVVATLAEFASTFDLNSLSADWMETSMWGWIRTRTEPVSARQYLRFAELD CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC IEEGDTPRHLVNGITNAKRALHLRMEDICNGFGFDKLGGSRSFPSMVKFISSLGITAPRL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH LVRLNKLRNEVEHDYVLPARQDVETFLDVASLFVAATDRWVDRQPCEAESFRNTGSVGEG HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCC FELANMRFDWERGTVKLDFREIGSGLTGPRVTTEFHIPSDEFFICARFAVELDGVR EEECCEEEECCCCCEEEEHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA