Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689706

Identifier: 116689706

GI number: 116689706

Start: 1872804

End: 1873970

Strand: Direct

Name: 116689706

Synonym: Bcen2424_1684

Alternate gene names: NA

Gene position: 1872804-1873970 (Clockwise)

Preceding gene: 116689705

Following gene: 116689707

Centisome position: 53.76

GC content: 66.32

Gene sequence:

>1167_bases
ATGAACACCACCCCGATCGCTCGCCGCGTCCGCCGGATCGCACTCGCACTGGGCTTCACGCTGTCGGCCGCCGCGGCCGT
GGCAGCCCCCGTATCGCTGAACATCGTCGACGTCGCAGGCAACCTGCAGCTCACGCAGAAGGCCATCGAGGCGTTCAAGG
AGAAGAACCCGGGCCTCGTCGCGAACGTCACGTTCACGAACGCGCCCGCGCCGCAGTTGCCGGGCAAGATCAAGGCGATG
CAGGCGGCGGGGCGCTCCGACATCGACCTCGTGCTGACCGGCACCGACGCGCTGGCGGCCGGCATCGAGCAAAACCTGTG
GCAGAAGCTCCTGCCCGACAACGCGGCCGCGCTCCCCGGCGTGCTCGACAAGTACGCGCCGGGCCCGCGCAAGATGCAGG
ATCTCGCGCAGGGCTTCGGCCTCGAAGTGACCTACATGCCGGCCGGCCCGCTGCTCGAATACAACCCGGCGAAGGTCAGC
GACCCGCCGAAGACGCCCGACCAGTTGCTCGCGTGGTGCAAGGCGCACCCGAACAAGCTGATCTATGCGCGCCCCGCGAA
CTCTGGCCCCGGCCGCACGTTCCTGATGGGGCTGCCGTACGTGCTCGGCGACAAGAATCCGCAGGACCCGATCAACGGCT
GGGACAAGACCTGGGCGTTCCTGAAACAGTTGAACGAATGCGTGCCGTACTACCCGGGCGGCACGTCGGCGGTGATGAAG
GAGCTCGGCGAAGGCACGCGCGACATGACCGTGACCGTCACCGGCTGGGACCTGAACCCGCGCGCGCTCGGCATCGTGCC
GGCCGAGTTCAAGATCCAGGCGTTCGACAACATGACGTGGGTCAACGACGCGCACTACATGGTGATCCCGAAGGGCGTGC
CGAAGGAAAAGCTCGACGTGCTGTTCAAGCTGATGAACTTCCTGCTCGAACCGGCGCAGCAGGCGATGACCTACGACGAC
GGCTACTTCTACCCGGGCCCGGCGGTGAAGGGCGTGACGCTCGAGATGGCGCCCGCGCACAGCCAGGAAGTGATCAGGAA
ATTCGGCCGCCCCGAATACGCAAAGCTGCTCGCCGATCGCCCGCACGTGCAGCCGCTCAACGCGCAGGCGATGGTCGCCG
CATTCCAGAAATGGGATCGCGAGATCGGTTCGCAGAAATCGAAGTGA

Upstream 100 bases:

>100_bases
CCCGCCCCGAGTCCGGTGGTTTTTTGTTGACCGACATCGTATAACGCCGTCATGATTTCCTGACAAGAAAGGTCCCATCC
ACCGACCGAAGTGAGGAGAC

Downstream 100 bases:

>100_bases
CGCCTGAACCGGCGGGCGCCACGGCGCCCGCGTCGATGGAGTTCGAGGAATGAAGCACAATTTCGAACGGTTGCGGCTCG
ACGGCGTGTGCCGCAGTTTT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MNTTPIARRVRRIALALGFTLSAAAAVAAPVSLNIVDVAGNLQLTQKAIEAFKEKNPGLVANVTFTNAPAPQLPGKIKAM
QAAGRSDIDLVLTGTDALAAGIEQNLWQKLLPDNAAALPGVLDKYAPGPRKMQDLAQGFGLEVTYMPAGPLLEYNPAKVS
DPPKTPDQLLAWCKAHPNKLIYARPANSGPGRTFLMGLPYVLGDKNPQDPINGWDKTWAFLKQLNECVPYYPGGTSAVMK
ELGEGTRDMTVTVTGWDLNPRALGIVPAEFKIQAFDNMTWVNDAHYMVIPKGVPKEKLDVLFKLMNFLLEPAQQAMTYDD
GYFYPGPAVKGVTLEMAPAHSQEVIRKFGRPEYAKLLADRPHVQPLNAQAMVAAFQKWDREIGSQKSK

Sequences:

>Translated_388_residues
MNTTPIARRVRRIALALGFTLSAAAAVAAPVSLNIVDVAGNLQLTQKAIEAFKEKNPGLVANVTFTNAPAPQLPGKIKAM
QAAGRSDIDLVLTGTDALAAGIEQNLWQKLLPDNAAALPGVLDKYAPGPRKMQDLAQGFGLEVTYMPAGPLLEYNPAKVS
DPPKTPDQLLAWCKAHPNKLIYARPANSGPGRTFLMGLPYVLGDKNPQDPINGWDKTWAFLKQLNECVPYYPGGTSAVMK
ELGEGTRDMTVTVTGWDLNPRALGIVPAEFKIQAFDNMTWVNDAHYMVIPKGVPKEKLDVLFKLMNFLLEPAQQAMTYDD
GYFYPGPAVKGVTLEMAPAHSQEVIRKFGRPEYAKLLADRPHVQPLNAQAMVAAFQKWDREIGSQKSK
>Mature_388_residues
MNTTPIARRVRRIALALGFTLSAAAAVAAPVSLNIVDVAGNLQLTQKAIEAFKEKNPGLVANVTFTNAPAPQLPGKIKAM
QAAGRSDIDLVLTGTDALAAGIEQNLWQKLLPDNAAALPGVLDKYAPGPRKMQDLAQGFGLEVTYMPAGPLLEYNPAKVS
DPPKTPDQLLAWCKAHPNKLIYARPANSGPGRTFLMGLPYVLGDKNPQDPINGWDKTWAFLKQLNECVPYYPGGTSAVMK
ELGEGTRDMTVTVTGWDLNPRALGIVPAEFKIQAFDNMTWVNDAHYMVIPKGVPKEKLDVLFKLMNFLLEPAQQAMTYDD
GYFYPGPAVKGVTLEMAPAHSQEVIRKFGRPEYAKLLADRPHVQPLNAQAMVAAFQKWDREIGSQKSK

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42287; Mature: 42287

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTPIARRVRRIALALGFTLSAAAAVAAPVSLNIVDVAGNLQLTQKAIEAFKEKNPGLV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEE
ANVTFTNAPAPQLPGKIKAMQAAGRSDIDLVLTGTDALAAGIEQNLWQKLLPDNAAALPG
EEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHCCH
VLDKYAPGPRKMQDLAQGFGLEVTYMPAGPLLEYNPAKVSDPPKTPDQLLAWCKAHPNKL
HHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCE
IYARPANSGPGRTFLMGLPYVLGDKNPQDPINGWDKTWAFLKQLNECVPYYPGGTSAVMK
EEEECCCCCCCCEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
ELGEGTRDMTVTVTGWDLNPRALGIVPAEFKIQAFDNMTWVNDAHYMVIPKGVPKEKLDV
HHCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEECCEEEECCCEEEEECCCCCHHHHHH
LFKLMNFLLEPAQQAMTYDDGYFYPGPAVKGVTLEMAPAHSQEVIRKFGRPEYAKLLADR
HHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHCCC
PHVQPLNAQAMVAAFQKWDREIGSQKSK
CCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNTTPIARRVRRIALALGFTLSAAAAVAAPVSLNIVDVAGNLQLTQKAIEAFKEKNPGLV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEE
ANVTFTNAPAPQLPGKIKAMQAAGRSDIDLVLTGTDALAAGIEQNLWQKLLPDNAAALPG
EEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHCCH
VLDKYAPGPRKMQDLAQGFGLEVTYMPAGPLLEYNPAKVSDPPKTPDQLLAWCKAHPNKL
HHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCE
IYARPANSGPGRTFLMGLPYVLGDKNPQDPINGWDKTWAFLKQLNECVPYYPGGTSAVMK
EEEECCCCCCCCEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
ELGEGTRDMTVTVTGWDLNPRALGIVPAEFKIQAFDNMTWVNDAHYMVIPKGVPKEKLDV
HHCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEECCEEEECCCEEEEECCCCCHHHHHH
LFKLMNFLLEPAQQAMTYDDGYFYPGPAVKGVTLEMAPAHSQEVIRKFGRPEYAKLLADR
HHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHCCC
PHVQPLNAQAMVAAFQKWDREIGSQKSK
CCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA