Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is cobL [H]

Identifier: 116689697

GI number: 116689697

Start: 1862306

End: 1863691

Strand: Direct

Name: cobL [H]

Synonym: Bcen2424_1675

Alternate gene names: 116689697

Gene position: 1862306-1863691 (Clockwise)

Preceding gene: 116689691

Following gene: 116689698

Centisome position: 53.45

GC content: 73.59

Gene sequence:

>1386_bases
ATGAAACGCCGGGTGGAACACGGTACCATGCCGTTTTTCGCAATGCGGACGGCTGCACCGGCGCTTTCACGGCCGCGCGG
CGACACGATGGAATCGAACGATGGGGAAGGGTGCATGACGGCGTGGCTGACGGTAGTGGGCATCGGCGACGACGGTTACG
CGGGGCTCGGACGCCACGCGCGGCGCGCGCTGCTCGATGCGACGCACGTGGTCGGCGCGACACGGCATCTCGACATGCTG
CCCGCGCGGTTGCGGGCGACGCGCGAAGCATGGCCGTCGCCGTTCGACCTGTCGGGGCTGCTCGCCCGCCGCGGCGCGCC
CGTGTGCGTGCTCGCGAGCGGCGACCCGATGCTGTTCGGCGTCGGCGCGACGCTCGCCCGCCAGCTTTCTCCCGACGAAT
GGCGCGTGCTGCCCGCGCCGTCGTCGCTGTCGCTCGCCGCGGCGCGTCTCGGCTGGGCGCTGCAGGACGTCGGCGCGGTC
TCGCTCGTCGGGCGTCCGCTTGCGACGCTGGCCCGCCATCTGCTGCCGGGCCGGCGCCTGTTCGTGCTGAGCGCCGACGG
CCGTACGCCGGCCGCCGTCGCGGCCGAACTCGCCGCGCGGGGCTTCGGGCCGACGCGCGTCAGCGTGTTCGAGCACCTCG
GCGGCCCGCTCGAGCGACGGATCGATGGCCTCGCGCAAGACTGGCACGTCGACGAAACCGCCGCGCTCAACCTCGTCGCG
CTCGATTGCCGGGCGGGCCCCGACGCGCCGCGCCGCGCGCTCACGCCCGGCCTGCCCGACGATGCGTACCGCCACGACGG
CCAGCTCACCAAGCGCGACCTGCGTGCGATGACGCTCGGGCGTCTCGCGCCCGCGCCAGGCGAACTGCTGTGGGACGTCG
GCGCCGGCAGCGGCTCGATCGGCATCGAATGGATGCGCGCGCATCCATCCTGTCAGGCCATCGCGATCGAAGCGCATGCG
GAGCGGCAGCGCTTCATCGAACACAACCGCGATACGCTCGGCGTGCCGGGCCTGCAACTCGTCGCGGGCCGTGCGCCCGA
TGCGCTCGCGGGGCTCGCCGCGCCCGACGCGATCTTCATCGGCGGCGGCGCGACGGCGCCCGGCGTGCTCGACGCGTGCT
GGGCTTCGCTGAAGCCCGGCGGCCGGCTGGTCGCGAACGCGGTCACGCTGCAGGGCGAGATGGCGCTCGCCGCGTGGCGC
GACGCGCATGGCGGCACGCTCACGCGCGTGTCGTTCGCGCATGCCGAACCGCTCGGCCGCTTCGACACGTGGCGGCAGCC
GCTGCCGGTCACGCTGTACGACGTGCGCAAGCCCGACACGGCAGACGCGACCGACACGGCCGACTCGTCGAATTCGTCGA
ACGCAACGGACGCAACGGACGCGTGA

Upstream 100 bases:

>100_bases
AGGATACCCGATTTCGGCCGCGATTCGCGAGCGGTCGGCCGTTCGCGGCGGGTGAAACGGGCAACGGTCGGACAACGATC
GGGCGCGGGCGGGCCGGCAG

Downstream 100 bases:

>100_bases
TGCGCGACGAAACCCCCGAACAACCCGCGCCGCTGCGCTTCGGCTACACGACAGGCAGCTGCGCGACCGCGACTTCGCTT
GCGGCCGCGCGGCTGCTGCT

Product: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit

Products: NA

Alternate protein names: Precorrin-6 methyltransferase; Precorrin-6Y methylase [H]

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MKRRVEHGTMPFFAMRTAAPALSRPRGDTMESNDGEGCMTAWLTVVGIGDDGYAGLGRHARRALLDATHVVGATRHLDML
PARLRATREAWPSPFDLSGLLARRGAPVCVLASGDPMLFGVGATLARQLSPDEWRVLPAPSSLSLAAARLGWALQDVGAV
SLVGRPLATLARHLLPGRRLFVLSADGRTPAAVAAELAARGFGPTRVSVFEHLGGPLERRIDGLAQDWHVDETAALNLVA
LDCRAGPDAPRRALTPGLPDDAYRHDGQLTKRDLRAMTLGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCQAIAIEAHA
ERQRFIEHNRDTLGVPGLQLVAGRAPDALAGLAAPDAIFIGGGATAPGVLDACWASLKPGGRLVANAVTLQGEMALAAWR
DAHGGTLTRVSFAHAEPLGRFDTWRQPLPVTLYDVRKPDTADATDTADSSNSSNATDATDA

Sequences:

>Translated_461_residues
MKRRVEHGTMPFFAMRTAAPALSRPRGDTMESNDGEGCMTAWLTVVGIGDDGYAGLGRHARRALLDATHVVGATRHLDML
PARLRATREAWPSPFDLSGLLARRGAPVCVLASGDPMLFGVGATLARQLSPDEWRVLPAPSSLSLAAARLGWALQDVGAV
SLVGRPLATLARHLLPGRRLFVLSADGRTPAAVAAELAARGFGPTRVSVFEHLGGPLERRIDGLAQDWHVDETAALNLVA
LDCRAGPDAPRRALTPGLPDDAYRHDGQLTKRDLRAMTLGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCQAIAIEAHA
ERQRFIEHNRDTLGVPGLQLVAGRAPDALAGLAAPDAIFIGGGATAPGVLDACWASLKPGGRLVANAVTLQGEMALAAWR
DAHGGTLTRVSFAHAEPLGRFDTWRQPLPVTLYDVRKPDTADATDTADSSNSSNATDATDA
>Mature_461_residues
MKRRVEHGTMPFFAMRTAAPALSRPRGDTMESNDGEGCMTAWLTVVGIGDDGYAGLGRHARRALLDATHVVGATRHLDML
PARLRATREAWPSPFDLSGLLARRGAPVCVLASGDPMLFGVGATLARQLSPDEWRVLPAPSSLSLAAARLGWALQDVGAV
SLVGRPLATLARHLLPGRRLFVLSADGRTPAAVAAELAARGFGPTRVSVFEHLGGPLERRIDGLAQDWHVDETAALNLVA
LDCRAGPDAPRRALTPGLPDDAYRHDGQLTKRDLRAMTLGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCQAIAIEAHA
ERQRFIEHNRDTLGVPGLQLVAGRAPDALAGLAAPDAIFIGGGATAPGVLDACWASLKPGGRLVANAVTLQGEMALAAWR
DAHGGTLTRVSFAHAEPLGRFDTWRQPLPVTLYDVRKPDTADATDTADSSNSSNATDATDA

Specific function: Catalyzes the methylation of both C-5 and C-15 in precorrin-6Y to form precorrin-8X [H]

COG id: COG2241

COG function: function code H; Precorrin-6B methylase 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the precorrin methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR012818
- InterPro:   IPR014008
- InterPro:   IPR006365 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: =2.1.1.132 [H]

Molecular weight: Translated: 48670; Mature: 48670

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRVEHGTMPFFAMRTAAPALSRPRGDTMESNDGEGCMTAWLTVVGIGDDGYAGLGRHA
CCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCHHEEEEEEEEECCCCCCCHHHHHH
RRALLDATHVVGATRHLDMLPARLRATREAWPSPFDLSGLLARRGAPVCVLASGDPMLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCEEEE
VGATLARQLSPDEWRVLPAPSSLSLAAARLGWALQDVGAVSLVGRPLATLARHLLPGRRL
CHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCEE
FVLSADGRTPAAVAAELAARGFGPTRVSVFEHLGGPLERRIDGLAQDWHVDETAALNLVA
EEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHEEEEEE
LDCRAGPDAPRRALTPGLPDDAYRHDGQLTKRDLRAMTLGRLAPAPGELLWDVGAGSGSI
EECCCCCCCCHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
GIEWMRAHPSCQAIAIEAHAERQRFIEHNRDTLGVPGLQLVAGRAPDALAGLAAPDAIFI
CEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCHHEEECCCCHHHHHCCCCCEEEE
GGGATAPGVLDACWASLKPGGRLVANAVTLQGEMALAAWRDAHGGTLTRVSFAHAEPLGR
CCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEHHCCCCCEEEEEEEHHCCCCCC
FDTWRQPLPVTLYDVRKPDTADATDTADSSNSSNATDATDA
HHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRRVEHGTMPFFAMRTAAPALSRPRGDTMESNDGEGCMTAWLTVVGIGDDGYAGLGRHA
CCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCHHEEEEEEEEECCCCCCCHHHHHH
RRALLDATHVVGATRHLDMLPARLRATREAWPSPFDLSGLLARRGAPVCVLASGDPMLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCEEEE
VGATLARQLSPDEWRVLPAPSSLSLAAARLGWALQDVGAVSLVGRPLATLARHLLPGRRL
CHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCEE
FVLSADGRTPAAVAAELAARGFGPTRVSVFEHLGGPLERRIDGLAQDWHVDETAALNLVA
EEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHEEEEEE
LDCRAGPDAPRRALTPGLPDDAYRHDGQLTKRDLRAMTLGRLAPAPGELLWDVGAGSGSI
EECCCCCCCCHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
GIEWMRAHPSCQAIAIEAHAERQRFIEHNRDTLGVPGLQLVAGRAPDALAGLAAPDAIFI
CEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCHHEEECCCCHHHHHCCCCCEEEE
GGGATAPGVLDACWASLKPGGRLVANAVTLQGEMALAAWRDAHGGTLTRVSFAHAEPLGR
CCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEHHCCCCCEEEEEEEHHCCCCCC
FDTWRQPLPVTLYDVRKPDTADATDTADSSNSSNATDATDA
HHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]