Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is cobL [H]
Identifier: 116689697
GI number: 116689697
Start: 1862306
End: 1863691
Strand: Direct
Name: cobL [H]
Synonym: Bcen2424_1675
Alternate gene names: 116689697
Gene position: 1862306-1863691 (Clockwise)
Preceding gene: 116689691
Following gene: 116689698
Centisome position: 53.45
GC content: 73.59
Gene sequence:
>1386_bases ATGAAACGCCGGGTGGAACACGGTACCATGCCGTTTTTCGCAATGCGGACGGCTGCACCGGCGCTTTCACGGCCGCGCGG CGACACGATGGAATCGAACGATGGGGAAGGGTGCATGACGGCGTGGCTGACGGTAGTGGGCATCGGCGACGACGGTTACG CGGGGCTCGGACGCCACGCGCGGCGCGCGCTGCTCGATGCGACGCACGTGGTCGGCGCGACACGGCATCTCGACATGCTG CCCGCGCGGTTGCGGGCGACGCGCGAAGCATGGCCGTCGCCGTTCGACCTGTCGGGGCTGCTCGCCCGCCGCGGCGCGCC CGTGTGCGTGCTCGCGAGCGGCGACCCGATGCTGTTCGGCGTCGGCGCGACGCTCGCCCGCCAGCTTTCTCCCGACGAAT GGCGCGTGCTGCCCGCGCCGTCGTCGCTGTCGCTCGCCGCGGCGCGTCTCGGCTGGGCGCTGCAGGACGTCGGCGCGGTC TCGCTCGTCGGGCGTCCGCTTGCGACGCTGGCCCGCCATCTGCTGCCGGGCCGGCGCCTGTTCGTGCTGAGCGCCGACGG CCGTACGCCGGCCGCCGTCGCGGCCGAACTCGCCGCGCGGGGCTTCGGGCCGACGCGCGTCAGCGTGTTCGAGCACCTCG GCGGCCCGCTCGAGCGACGGATCGATGGCCTCGCGCAAGACTGGCACGTCGACGAAACCGCCGCGCTCAACCTCGTCGCG CTCGATTGCCGGGCGGGCCCCGACGCGCCGCGCCGCGCGCTCACGCCCGGCCTGCCCGACGATGCGTACCGCCACGACGG CCAGCTCACCAAGCGCGACCTGCGTGCGATGACGCTCGGGCGTCTCGCGCCCGCGCCAGGCGAACTGCTGTGGGACGTCG GCGCCGGCAGCGGCTCGATCGGCATCGAATGGATGCGCGCGCATCCATCCTGTCAGGCCATCGCGATCGAAGCGCATGCG GAGCGGCAGCGCTTCATCGAACACAACCGCGATACGCTCGGCGTGCCGGGCCTGCAACTCGTCGCGGGCCGTGCGCCCGA TGCGCTCGCGGGGCTCGCCGCGCCCGACGCGATCTTCATCGGCGGCGGCGCGACGGCGCCCGGCGTGCTCGACGCGTGCT GGGCTTCGCTGAAGCCCGGCGGCCGGCTGGTCGCGAACGCGGTCACGCTGCAGGGCGAGATGGCGCTCGCCGCGTGGCGC GACGCGCATGGCGGCACGCTCACGCGCGTGTCGTTCGCGCATGCCGAACCGCTCGGCCGCTTCGACACGTGGCGGCAGCC GCTGCCGGTCACGCTGTACGACGTGCGCAAGCCCGACACGGCAGACGCGACCGACACGGCCGACTCGTCGAATTCGTCGA ACGCAACGGACGCAACGGACGCGTGA
Upstream 100 bases:
>100_bases AGGATACCCGATTTCGGCCGCGATTCGCGAGCGGTCGGCCGTTCGCGGCGGGTGAAACGGGCAACGGTCGGACAACGATC GGGCGCGGGCGGGCCGGCAG
Downstream 100 bases:
>100_bases TGCGCGACGAAACCCCCGAACAACCCGCGCCGCTGCGCTTCGGCTACACGACAGGCAGCTGCGCGACCGCGACTTCGCTT GCGGCCGCGCGGCTGCTGCT
Product: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
Products: NA
Alternate protein names: Precorrin-6 methyltransferase; Precorrin-6Y methylase [H]
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKRRVEHGTMPFFAMRTAAPALSRPRGDTMESNDGEGCMTAWLTVVGIGDDGYAGLGRHARRALLDATHVVGATRHLDML PARLRATREAWPSPFDLSGLLARRGAPVCVLASGDPMLFGVGATLARQLSPDEWRVLPAPSSLSLAAARLGWALQDVGAV SLVGRPLATLARHLLPGRRLFVLSADGRTPAAVAAELAARGFGPTRVSVFEHLGGPLERRIDGLAQDWHVDETAALNLVA LDCRAGPDAPRRALTPGLPDDAYRHDGQLTKRDLRAMTLGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCQAIAIEAHA ERQRFIEHNRDTLGVPGLQLVAGRAPDALAGLAAPDAIFIGGGATAPGVLDACWASLKPGGRLVANAVTLQGEMALAAWR DAHGGTLTRVSFAHAEPLGRFDTWRQPLPVTLYDVRKPDTADATDTADSSNSSNATDATDA
Sequences:
>Translated_461_residues MKRRVEHGTMPFFAMRTAAPALSRPRGDTMESNDGEGCMTAWLTVVGIGDDGYAGLGRHARRALLDATHVVGATRHLDML PARLRATREAWPSPFDLSGLLARRGAPVCVLASGDPMLFGVGATLARQLSPDEWRVLPAPSSLSLAAARLGWALQDVGAV SLVGRPLATLARHLLPGRRLFVLSADGRTPAAVAAELAARGFGPTRVSVFEHLGGPLERRIDGLAQDWHVDETAALNLVA LDCRAGPDAPRRALTPGLPDDAYRHDGQLTKRDLRAMTLGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCQAIAIEAHA ERQRFIEHNRDTLGVPGLQLVAGRAPDALAGLAAPDAIFIGGGATAPGVLDACWASLKPGGRLVANAVTLQGEMALAAWR DAHGGTLTRVSFAHAEPLGRFDTWRQPLPVTLYDVRKPDTADATDTADSSNSSNATDATDA >Mature_461_residues MKRRVEHGTMPFFAMRTAAPALSRPRGDTMESNDGEGCMTAWLTVVGIGDDGYAGLGRHARRALLDATHVVGATRHLDML PARLRATREAWPSPFDLSGLLARRGAPVCVLASGDPMLFGVGATLARQLSPDEWRVLPAPSSLSLAAARLGWALQDVGAV SLVGRPLATLARHLLPGRRLFVLSADGRTPAAVAAELAARGFGPTRVSVFEHLGGPLERRIDGLAQDWHVDETAALNLVA LDCRAGPDAPRRALTPGLPDDAYRHDGQLTKRDLRAMTLGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCQAIAIEAHA ERQRFIEHNRDTLGVPGLQLVAGRAPDALAGLAAPDAIFIGGGATAPGVLDACWASLKPGGRLVANAVTLQGEMALAAWR DAHGGTLTRVSFAHAEPLGRFDTWRQPLPVTLYDVRKPDTADATDTADSSNSSNATDATDA
Specific function: Catalyzes the methylation of both C-5 and C-15 in precorrin-6Y to form precorrin-8X [H]
COG id: COG2241
COG function: function code H; Precorrin-6B methylase 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR012818 - InterPro: IPR014008 - InterPro: IPR006365 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.132 [H]
Molecular weight: Translated: 48670; Mature: 48670
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRVEHGTMPFFAMRTAAPALSRPRGDTMESNDGEGCMTAWLTVVGIGDDGYAGLGRHA CCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCHHEEEEEEEEECCCCCCCHHHHHH RRALLDATHVVGATRHLDMLPARLRATREAWPSPFDLSGLLARRGAPVCVLASGDPMLFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCEEEE VGATLARQLSPDEWRVLPAPSSLSLAAARLGWALQDVGAVSLVGRPLATLARHLLPGRRL CHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCEE FVLSADGRTPAAVAAELAARGFGPTRVSVFEHLGGPLERRIDGLAQDWHVDETAALNLVA EEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHEEEEEE LDCRAGPDAPRRALTPGLPDDAYRHDGQLTKRDLRAMTLGRLAPAPGELLWDVGAGSGSI EECCCCCCCCHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC GIEWMRAHPSCQAIAIEAHAERQRFIEHNRDTLGVPGLQLVAGRAPDALAGLAAPDAIFI CEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCHHEEECCCCHHHHHCCCCCEEEE GGGATAPGVLDACWASLKPGGRLVANAVTLQGEMALAAWRDAHGGTLTRVSFAHAEPLGR CCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEHHCCCCCEEEEEEEHHCCCCCC FDTWRQPLPVTLYDVRKPDTADATDTADSSNSSNATDATDA HHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRRVEHGTMPFFAMRTAAPALSRPRGDTMESNDGEGCMTAWLTVVGIGDDGYAGLGRHA CCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCHHEEEEEEEEECCCCCCCHHHHHH RRALLDATHVVGATRHLDMLPARLRATREAWPSPFDLSGLLARRGAPVCVLASGDPMLFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCEEEE VGATLARQLSPDEWRVLPAPSSLSLAAARLGWALQDVGAVSLVGRPLATLARHLLPGRRL CHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCEE FVLSADGRTPAAVAAELAARGFGPTRVSVFEHLGGPLERRIDGLAQDWHVDETAALNLVA EEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHEEEEEE LDCRAGPDAPRRALTPGLPDDAYRHDGQLTKRDLRAMTLGRLAPAPGELLWDVGAGSGSI EECCCCCCCCHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC GIEWMRAHPSCQAIAIEAHAERQRFIEHNRDTLGVPGLQLVAGRAPDALAGLAAPDAIFI CEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCHHEEECCCCHHHHHCCCCCEEEE GGGATAPGVLDACWASLKPGGRLVANAVTLQGEMALAAWRDAHGGTLTRVSFAHAEPLGR CCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEHHCCCCCEEEEEEEHHCCCCCC FDTWRQPLPVTLYDVRKPDTADATDTADSSNSSNATDATDA HHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]