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The map label for this gene is cbiD [H]

Identifier: 116689698

GI number: 116689698

Start: 1863691

End: 1864779

Strand: Direct

Name: cbiD [H]

Synonym: Bcen2424_1676

Alternate gene names: 116689698

Gene position: 1863691-1864779 (Clockwise)

Preceding gene: 116689697

Following gene: 116689699

Centisome position: 53.49

GC content: 70.98

Gene sequence:

>1089_bases
ATGCGCGACGAAACCCCCGAACAACCCGCGCCGCTGCGCTTCGGCTACACGACAGGCAGCTGCGCGACCGCGACTTCGCT
TGCGGCCGCGCGGCTGCTGCTCGCGGGTCAGGCGGACGACGCGGTCGAGATCGTGCTGCCGAAGGGGCAGCGCGTGATGA
TGCGGCTCGAGTTCTGCCGCGCGACGGCCGACGGCGCCGAAGCCGGCACGATCAAGGATGCCGGCGACGATCCGGACGTC
ACGCATGGCGCGCTGATCTTCGCACGCGTCGCGCTCGCGGCGGCGCCCGGCGTGCGCTTTCATGCCGGGCCGGGCGTCGG
CACGGTCACGCGCGCGGGGCTGACGTTGCCGGTCGGCGAACCGGCGATCAATCCGGTGCCGCGCCAGATGATGACTACCC
ACCTCGAAGCGCTCGCCGCTGAACACGGCTACGCGGGCGGCTTCGACGTGACGATCGGCGTCGAAGGCGGCGAGGCGCTT
GCGCTGAAGACGATGAACCCGCGCCTGGGCATCGTCGGCGGGCTGTCGATCCTCGGCACGACCGGCATCGTGCGGCCGTT
CTCGTGTTCGGCCTATATCGCGTCGATTCATCAGGGCATCGACGTCGCACGGGCGAACGGCATCGCGCATATCGCCGCCT
GCACGGGCAACGCCAGCGAGGACGCGATGCGCGCGCACTACCAGTTGCCCGACATGGCGCTGATCGAGATGGGCGATTTC
GCGGGCGCGGTGCTCAAGCACCTGCGGCGCGCGCCGGTCGCGCGCCTGTCGATGTGCGGCGGCTTCGGCAAGTTGAGCAA
GCTCGCGGCCGGCCATCTCGACCTGCACAGCCGCCATTCGAGCATCGACCTGCCGTTGCTCGCGCAATGGGCGGCCGAAG
CCGGCGCGAACGAGGCGCTGCAGGCCGCGATGCGCGCGGCCAACACGAGCCAGGAAGCGTTGAAACTGGCGCAGGCCGAC
GGCGTGCCGCTCGGCGATCTCGTCTGCGCGCATGCGCTGCGGGTGGCACGCGACATCGTGCCGCCGTCGGTCGCGGTCGA
GATGTTCGCGATCGACCGGCAGGGCCGCTTCGTCGGGGCGGCGCGATGA

Upstream 100 bases:

>100_bases
CGGTCACGCTGTACGACGTGCGCAAGCCCGACACGGCAGACGCGACCGACACGGCCGACTCGTCGAATTCGTCGAACGCA
ACGGACGCAACGGACGCGTG

Downstream 100 bases:

>100_bases
GCCCGCGCATCCTGCTGCTCGGCGGCACCGGCGATGCGCTGAAAATCGCGCGCGCGCTCGGCCCGCATCATGTCTATAGT
CTCGCCGGTCTCGGCAAGAC

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MRDETPEQPAPLRFGYTTGSCATATSLAAARLLLAGQADDAVEIVLPKGQRVMMRLEFCRATADGAEAGTIKDAGDDPDV
THGALIFARVALAAAPGVRFHAGPGVGTVTRAGLTLPVGEPAINPVPRQMMTTHLEALAAEHGYAGGFDVTIGVEGGEAL
ALKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNASEDAMRAHYQLPDMALIEMGDF
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGANEALQAAMRAANTSQEALKLAQAD
GVPLGDLVCAHALRVARDIVPPSVAVEMFAIDRQGRFVGAAR

Sequences:

>Translated_362_residues
MRDETPEQPAPLRFGYTTGSCATATSLAAARLLLAGQADDAVEIVLPKGQRVMMRLEFCRATADGAEAGTIKDAGDDPDV
THGALIFARVALAAAPGVRFHAGPGVGTVTRAGLTLPVGEPAINPVPRQMMTTHLEALAAEHGYAGGFDVTIGVEGGEAL
ALKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNASEDAMRAHYQLPDMALIEMGDF
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGANEALQAAMRAANTSQEALKLAQAD
GVPLGDLVCAHALRVARDIVPPSVAVEMFAIDRQGRFVGAAR
>Mature_362_residues
MRDETPEQPAPLRFGYTTGSCATATSLAAARLLLAGQADDAVEIVLPKGQRVMMRLEFCRATADGAEAGTIKDAGDDPDV
THGALIFARVALAAAPGVRFHAGPGVGTVTRAGLTLPVGEPAINPVPRQMMTTHLEALAAEHGYAGGFDVTIGVEGGEAL
ALKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNASEDAMRAHYQLPDMALIEMGDF
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGANEALQAAMRAANTSQEALKLAQAD
GVPLGDLVCAHALRVARDIVPPSVAVEMFAIDRQGRFVGAAR

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 37438; Mature: 37438

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDETPEQPAPLRFGYTTGSCATATSLAAARLLLAGQADDAVEIVLPKGQRVMMRLEFCR
CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHH
ATADGAEAGTIKDAGDDPDVTHGALIFARVALAAAPGVRFHAGPGVGTVTRAGLTLPVGE
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHCCEEEECCC
PAINPVPRQMMTTHLEALAAEHGYAGGFDVTIGVEGGEALALKTMNPRLGIVGGLSILGT
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECHHHHCC
TGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNASEDAMRAHYQLPDMALIEMGDF
CCCCCCCCHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEHHHH
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGANEAL
HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCHHHHH
QAAMRAANTSQEALKLAQADGVPLGDLVCAHALRVARDIVPPSVAVEMFAIDRQGRFVGA
HHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCEECC
AR
CC
>Mature Secondary Structure
MRDETPEQPAPLRFGYTTGSCATATSLAAARLLLAGQADDAVEIVLPKGQRVMMRLEFCR
CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHH
ATADGAEAGTIKDAGDDPDVTHGALIFARVALAAAPGVRFHAGPGVGTVTRAGLTLPVGE
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHCCEEEECCC
PAINPVPRQMMTTHLEALAAEHGYAGGFDVTIGVEGGEALALKTMNPRLGIVGGLSILGT
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECHHHHCC
TGIVRPFSCSAYIASIHQGIDVARANGIAHIAACTGNASEDAMRAHYQLPDMALIEMGDF
CCCCCCCCHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEHHHH
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWAAEAGANEAL
HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCHHHHH
QAAMRAANTSQEALKLAQADGVPLGDLVCAHALRVARDIVPPSVAVEMFAIDRQGRFVGA
HHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCEECC
AR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA