Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is echA8 [H]
Identifier: 116689582
GI number: 116689582
Start: 1724996
End: 1726159
Strand: Direct
Name: echA8 [H]
Synonym: Bcen2424_1560
Alternate gene names: 116689582
Gene position: 1724996-1726159 (Clockwise)
Preceding gene: 116689581
Following gene: 116689584
Centisome position: 49.51
GC content: 69.67
Gene sequence:
>1164_bases ATGACCTTCATGACCGATTCCCTTTCCGCCGCCGTTTCCGCCGAATCCGCCCAGCCCGACGTGCGCGCCTATGTCGCGAA CCGCATCGGCTTTCTCGAACTGAACCGGCCGAAGGCGCTGAATGCGCTGTCGATCGGCATGATCCGGCTGATGCAGCAGG CGCTCGACGCGTGGCGCGACGATCCCGACGTCGTCGCGGTCGTGGTGCACAGTCCCCACCCGCGCGCGTTCTGCGCGGGC GGCGACGTGCGCTTCTTCCACGATGCGTGGCAGCGCGGCGACCGCGATGCGGTCGATACGTTCTTCATCGAGGAATACAC GCTGAACCATGCGATTTTCACGTATCCGAAGCCGTACATCGCGTTGATGCACGGCGTCGTGATGGGCGGCGGCATGGGGA TTTCGCAGGCGGCGCGGCATACGGGCGGCCTGCGCGTCGTGACCGACTCGACGAAGATGGCGATGCCCGAAACGCGCATC GGCCTGTTCCCGGACGTCGGGATGAGCTGGTTTCTCGCGCGCACGCCCGGCGCGATCGGCCGCTATCTCGCGGTGACCGG CGCGACGCTCGACGCGGCCGGCGCGCTGTACGCGCAACTCGCCGACGTCTATCTGCCCGATGCCGCGCTGCCGCCGCTGC TCGACACGCTGCGCGGCACGCGCATCGACAGCGGTGCGCAGGCCGTCGGGTGCGTGACCGACGCGGCGGCCGCGCACAAG GTCGTGCCGACGCCGGACACGTCGGCGCTCGCCGACGCGCGCGCCGGGATCGACCGGCATTTCGCGCAGCCCGACCTCAA CGCAATCCTCGCGTCGCTCGACGCCGAGCCGGATTGCGCGGCGGTCGACGGGTGGGTCGAGAAGGCGACTCACGCGATGC GCGAGCAGTTGTCGCCGCTGTCGATGGCCGTATCGCTCGAAGTCGTCGAACGCGCGCGCGGCGCGACGATGGCCGATTGC CTGCGGCGCGATCTCGATCTCACGCGCTCGACCTTCGCGCGCGGCGACGTGATCGAAGGCGTGCGCGCGCTGATCGTCGA CAAGGATCACCAGCCGGTGTGGCGCTTCAGGTCGGCCGCCGACGTCGGGCGCGCCGACGTGCTCGCGATGTTCGACAGCC CGTGGACGCCCGACACGCATCCGCTGCGCGCGCTGAAGGACTGA
Upstream 100 bases:
>100_bases CCGGCGGTGATCGGCCTCGGGCTGATCATCGCGGGCGTCGTGGTGCTGAACCTGTTCTCGAAGATGCAGGCGCACTGAGC GTGCGACCGCCGTTTGCCGG
Downstream 100 bases:
>100_bases CGTCGATCAGGCTGATTCGCGCGGGAGGAGCGACGCGCGGGGAAGAAACGAAAAGGCCGCGTGCACGATGCACGCGGCCT TTTTCATGGATGTCGGCCGG
Product: 3-hydroxyisobutyryl-CoA hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MTFMTDSLSAAVSAESAQPDVRAYVANRIGFLELNRPKALNALSIGMIRLMQQALDAWRDDPDVVAVVVHSPHPRAFCAG GDVRFFHDAWQRGDRDAVDTFFIEEYTLNHAIFTYPKPYIALMHGVVMGGGMGISQAARHTGGLRVVTDSTKMAMPETRI GLFPDVGMSWFLARTPGAIGRYLAVTGATLDAAGALYAQLADVYLPDAALPPLLDTLRGTRIDSGAQAVGCVTDAAAAHK VVPTPDTSALADARAGIDRHFAQPDLNAILASLDAEPDCAAVDGWVEKATHAMREQLSPLSMAVSLEVVERARGATMADC LRRDLDLTRSTFARGDVIEGVRALIVDKDHQPVWRFRSAADVGRADVLAMFDSPWTPDTHPLRALKD
Sequences:
>Translated_387_residues MTFMTDSLSAAVSAESAQPDVRAYVANRIGFLELNRPKALNALSIGMIRLMQQALDAWRDDPDVVAVVVHSPHPRAFCAG GDVRFFHDAWQRGDRDAVDTFFIEEYTLNHAIFTYPKPYIALMHGVVMGGGMGISQAARHTGGLRVVTDSTKMAMPETRI GLFPDVGMSWFLARTPGAIGRYLAVTGATLDAAGALYAQLADVYLPDAALPPLLDTLRGTRIDSGAQAVGCVTDAAAAHK VVPTPDTSALADARAGIDRHFAQPDLNAILASLDAEPDCAAVDGWVEKATHAMREQLSPLSMAVSLEVVERARGATMADC LRRDLDLTRSTFARGDVIEGVRALIVDKDHQPVWRFRSAADVGRADVLAMFDSPWTPDTHPLRALKD >Mature_386_residues TFMTDSLSAAVSAESAQPDVRAYVANRIGFLELNRPKALNALSIGMIRLMQQALDAWRDDPDVVAVVVHSPHPRAFCAGG DVRFFHDAWQRGDRDAVDTFFIEEYTLNHAIFTYPKPYIALMHGVVMGGGMGISQAARHTGGLRVVTDSTKMAMPETRIG LFPDVGMSWFLARTPGAIGRYLAVTGATLDAAGALYAQLADVYLPDAALPPLLDTLRGTRIDSGAQAVGCVTDAAAAHKV VPTPDTSALADARAGIDRHFAQPDLNAILASLDAEPDCAAVDGWVEKATHAMREQLSPLSMAVSLEVVERARGATMADCL RRDLDLTRSTFARGDVIEGVRALIVDKDHQPVWRFRSAADVGRADVLAMFDSPWTPDTHPLRALKD
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI37594471, Length=349, Percent_Identity=31.5186246418338, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI37594469, Length=301, Percent_Identity=31.2292358803987, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI194097323, Length=221, Percent_Identity=29.8642533936652, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI25144157, Length=386, Percent_Identity=36.5284974093264, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI25144160, Length=386, Percent_Identity=36.5284974093264, Blast_Score=194, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6320241, Length=198, Percent_Identity=37.3737373737374, Blast_Score=118, Evalue=2e-27, Organism=Drosophila melanogaster, GI28571730, Length=386, Percent_Identity=33.9378238341969, Blast_Score=195, Evalue=4e-50, Organism=Drosophila melanogaster, GI28571729, Length=386, Percent_Identity=33.9378238341969, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI24653139, Length=245, Percent_Identity=28.9795918367347, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 41761; Mature: 41630
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFMTDSLSAAVSAESAQPDVRAYVANRIGFLELNRPKALNALSIGMIRLMQQALDAWRD CCCCCCCHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCC DPDVVAVVVHSPHPRAFCAGGDVRFFHDAWQRGDRDAVDTFFIEEYTLNHAIFTYPKPYI CCCEEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCHHH ALMHGVVMGGGMGISQAARHTGGLRVVTDSTKMAMPETRIGLFPDVGMSWFLARTPGAIG HHHHHHHHCCCCCHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCCEEECCCCCHHH RYLAVTGATLDAAGALYAQLADVYLPDAALPPLLDTLRGTRIDSGAQAVGCVTDAAAAHK HHHEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC VVPTPDTSALADARAGIDRHFAQPDLNAILASLDAEPDCAAVDGWVEKATHAMREQLSPL CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHH SMAVSLEVVERARGATMADCLRRDLDLTRSTFARGDVIEGVRALIVDKDHQPVWRFRSAA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCHHHHHHHHH DVGRADVLAMFDSPWTPDTHPLRALKD HCCCHHEEEEECCCCCCCCCCHHHCCC >Mature Secondary Structure TFMTDSLSAAVSAESAQPDVRAYVANRIGFLELNRPKALNALSIGMIRLMQQALDAWRD CCCCCCHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCC DPDVVAVVVHSPHPRAFCAGGDVRFFHDAWQRGDRDAVDTFFIEEYTLNHAIFTYPKPYI CCCEEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCHHH ALMHGVVMGGGMGISQAARHTGGLRVVTDSTKMAMPETRIGLFPDVGMSWFLARTPGAIG HHHHHHHHCCCCCHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCCEEECCCCCHHH RYLAVTGATLDAAGALYAQLADVYLPDAALPPLLDTLRGTRIDSGAQAVGCVTDAAAAHK HHHEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC VVPTPDTSALADARAGIDRHFAQPDLNAILASLDAEPDCAAVDGWVEKATHAMREQLSPL CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHH SMAVSLEVVERARGATMADCLRRDLDLTRSTFARGDVIEGVRALIVDKDHQPVWRFRSAA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCHHHHHHHHH DVGRADVLAMFDSPWTPDTHPLRALKD HCCCHHEEEEECCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]