Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is ssuD [H]

Identifier: 116689584

GI number: 116689584

Start: 1727063

End: 1728220

Strand: Direct

Name: ssuD [H]

Synonym: Bcen2424_1562

Alternate gene names: 116689584

Gene position: 1727063-1728220 (Clockwise)

Preceding gene: 116689582

Following gene: 116689585

Centisome position: 49.57

GC content: 67.7

Gene sequence:

>1158_bases
ATGAATGTGTTCTGGTTTATCCCCACGCATGGCGACAGCCGCTATCTCGGCACGGCCGAAGGCGCGCGCGCCGCGGACTA
CGATTACTTCAAGCAGGTCGCCGTGGCGGCGGACACGCTCGGCTACGACGGTGTGCTGCTGCCGACCGGCCGTTCCTGCG
AGGATGCGTGGGTCGTTGCATCGAGCCTCATTCCGGCGACGCAGCGCCTGAAATTCCTGGTCGCCGTGCGTCCCGGCATC
GCTTCGCCGGGGCTCGCCGCGCGGATGGCCGCGACCTTCGACCGTCTGTCGGGCGGCCGCCTGCTGATCAACGTCGTCAC
GGGCGGCGATGCGGCCGAGCTCGAAGGCGACGGCCTCTTCGCCGATCACGACACGCGCTACGAGATCACCGACGATTTCC
TGAACATCTGGCGCGGACTGCTCGCCGCATCGCACGACAACGACGGGTTCGACTACATCGGCAAGCACCTGCAGTCGAAA
GGCGGCAAGGCGCTTTATCCGCCCGTCCAGCATCCGCATCCGCCGCTGTGGTTCGGCGGCTCGTCGCCGGCCGCTCACGC
GATCGCCGCCGATCACATCGATACCTATCTGACCTGGGGCGAGCCGCCCGAGGCCGTCGCGAAGAAGATCGCCGACATCC
GCGCCCGTGCCGACGCGCGCGGCCGCAAGATCAAGTTCGGCATCCGCCTGCACGTGATCGTGCGCGAGACCGAGGACGAG
GCATGGCGTGACGCCGATCGGCTGATCAGCCGGCTCGACGACGACACGATCGCGCGTGCGCAGAAAGCGTTCGCGAACAT
GGATTCGGAAGGCCAGCGCCGGATGGCCGCGCTGCACGGCGGCAAGCGCGGCGGCCGCGAGGCGCTCGAGGTCTATCCGA
ACCTGTGGGCCGGCGTGGGGCTCGTGCGCGGCGGCGCCGGCACGGCGCTCGTCGGCAATCCCGAGCAGGTCGCGGAACGG
ATGCGCGAATACGCGGATCTCGGCATCGAGACGTTCATCCTGTCCGGCTATCCGCACCTCGAGGAGTCGTATCGCTTCGC
GGAACTCGTGTTCCCGCTGATCAAGGGCGAGGGTGTCAAGAAGGCGGCTGGTCCGCTGTCGGGGCCGTTCGGCGAGATCG
TCGGCAACAACTATCTGCCGAAGACGAGCCAGAGCTGA

Upstream 100 bases:

>100_bases
CCCGATTCGAATGCACACCATGCATGCGTCGCTCCTCCGCGACGCGAGCAGGGCGACGATTTTTCAAATTTCGGCAGTGA
CAGTCAAGCAGGAGCAGCAG

Downstream 100 bases:

>100_bases
GCGACGGAGGCTTGCGATGACAACGAAAACGTCGACGACGGGCGTCGCCGTGGCCGCCCGCGCGTGGCGCGGCGTCGCGC
CGTGGCTCGTGCCGCTCGCG

Product: alkanesulfonate monooxygenase

Products: NA

Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase [H]

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MNVFWFIPTHGDSRYLGTAEGARAADYDYFKQVAVAADTLGYDGVLLPTGRSCEDAWVVASSLIPATQRLKFLVAVRPGI
ASPGLAARMAATFDRLSGGRLLINVVTGGDAAELEGDGLFADHDTRYEITDDFLNIWRGLLAASHDNDGFDYIGKHLQSK
GGKALYPPVQHPHPPLWFGGSSPAAHAIAADHIDTYLTWGEPPEAVAKKIADIRARADARGRKIKFGIRLHVIVRETEDE
AWRDADRLISRLDDDTIARAQKAFANMDSEGQRRMAALHGGKRGGREALEVYPNLWAGVGLVRGGAGTALVGNPEQVAER
MREYADLGIETFILSGYPHLEESYRFAELVFPLIKGEGVKKAAGPLSGPFGEIVGNNYLPKTSQS

Sequences:

>Translated_385_residues
MNVFWFIPTHGDSRYLGTAEGARAADYDYFKQVAVAADTLGYDGVLLPTGRSCEDAWVVASSLIPATQRLKFLVAVRPGI
ASPGLAARMAATFDRLSGGRLLINVVTGGDAAELEGDGLFADHDTRYEITDDFLNIWRGLLAASHDNDGFDYIGKHLQSK
GGKALYPPVQHPHPPLWFGGSSPAAHAIAADHIDTYLTWGEPPEAVAKKIADIRARADARGRKIKFGIRLHVIVRETEDE
AWRDADRLISRLDDDTIARAQKAFANMDSEGQRRMAALHGGKRGGREALEVYPNLWAGVGLVRGGAGTALVGNPEQVAER
MREYADLGIETFILSGYPHLEESYRFAELVFPLIKGEGVKKAAGPLSGPFGEIVGNNYLPKTSQS
>Mature_385_residues
MNVFWFIPTHGDSRYLGTAEGARAADYDYFKQVAVAADTLGYDGVLLPTGRSCEDAWVVASSLIPATQRLKFLVAVRPGI
ASPGLAARMAATFDRLSGGRLLINVVTGGDAAELEGDGLFADHDTRYEITDDFLNIWRGLLAASHDNDGFDYIGKHLQSK
GGKALYPPVQHPHPPLWFGGSSPAAHAIAADHIDTYLTWGEPPEAVAKKIADIRARADARGRKIKFGIRLHVIVRETEDE
AWRDADRLISRLDDDTIARAQKAFANMDSEGQRRMAALHGGKRGGREALEVYPNLWAGVGLVRGGAGTALVGNPEQVAER
MREYADLGIETFILSGYPHLEESYRFAELVFPLIKGEGVKKAAGPLSGPFGEIVGNNYLPKTSQS

Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SsuD family [H]

Homologues:

Organism=Escherichia coli, GI1787166, Length=386, Percent_Identity=60.880829015544, Blast_Score=480, Evalue=1e-137,
Organism=Escherichia coli, GI1787247, Length=247, Percent_Identity=25.9109311740891, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019911
- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: =1.14.14.5 [H]

Molecular weight: Translated: 41782; Mature: 41782

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVFWFIPTHGDSRYLGTAEGARAADYDYFKQVAVAADTLGYDGVLLPTGRSCEDAWVVA
CCEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHH
SSLIPATQRLKFLVAVRPGIASPGLAARMAATFDRLSGGRLLINVVTGGDAAELEGDGLF
HHHCCHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEECCCCEE
ADHDTRYEITDDFLNIWRGLLAASHDNDGFDYIGKHLQSKGGKALYPPVQHPHPPLWFGG
CCCCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC
SSPAAHAIAADHIDTYLTWGEPPEAVAKKIADIRARADARGRKIKFGIRLHVIVRETEDE
CCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCH
AWRDADRLISRLDDDTIARAQKAFANMDSEGQRRMAALHGGKRGGREALEVYPNLWAGVG
HHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
LVRGGAGTALVGNPEQVAERMREYADLGIETFILSGYPHLEESYRFAELVFPLIKGEGVK
EEECCCCCEEECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
KAAGPLSGPFGEIVGNNYLPKTSQS
HHCCCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNVFWFIPTHGDSRYLGTAEGARAADYDYFKQVAVAADTLGYDGVLLPTGRSCEDAWVVA
CCEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHH
SSLIPATQRLKFLVAVRPGIASPGLAARMAATFDRLSGGRLLINVVTGGDAAELEGDGLF
HHHCCHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEECCCCEE
ADHDTRYEITDDFLNIWRGLLAASHDNDGFDYIGKHLQSKGGKALYPPVQHPHPPLWFGG
CCCCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC
SSPAAHAIAADHIDTYLTWGEPPEAVAKKIADIRARADARGRKIKFGIRLHVIVRETEDE
CCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCH
AWRDADRLISRLDDDTIARAQKAFANMDSEGQRRMAALHGGKRGGREALEVYPNLWAGVG
HHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
LVRGGAGTALVGNPEQVAERMREYADLGIETFILSGYPHLEESYRFAELVFPLIKGEGVK
EEECCCCCEEECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
KAAGPLSGPFGEIVGNNYLPKTSQS
HHCCCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA