Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is ssuD [H]
Identifier: 116689584
GI number: 116689584
Start: 1727063
End: 1728220
Strand: Direct
Name: ssuD [H]
Synonym: Bcen2424_1562
Alternate gene names: 116689584
Gene position: 1727063-1728220 (Clockwise)
Preceding gene: 116689582
Following gene: 116689585
Centisome position: 49.57
GC content: 67.7
Gene sequence:
>1158_bases ATGAATGTGTTCTGGTTTATCCCCACGCATGGCGACAGCCGCTATCTCGGCACGGCCGAAGGCGCGCGCGCCGCGGACTA CGATTACTTCAAGCAGGTCGCCGTGGCGGCGGACACGCTCGGCTACGACGGTGTGCTGCTGCCGACCGGCCGTTCCTGCG AGGATGCGTGGGTCGTTGCATCGAGCCTCATTCCGGCGACGCAGCGCCTGAAATTCCTGGTCGCCGTGCGTCCCGGCATC GCTTCGCCGGGGCTCGCCGCGCGGATGGCCGCGACCTTCGACCGTCTGTCGGGCGGCCGCCTGCTGATCAACGTCGTCAC GGGCGGCGATGCGGCCGAGCTCGAAGGCGACGGCCTCTTCGCCGATCACGACACGCGCTACGAGATCACCGACGATTTCC TGAACATCTGGCGCGGACTGCTCGCCGCATCGCACGACAACGACGGGTTCGACTACATCGGCAAGCACCTGCAGTCGAAA GGCGGCAAGGCGCTTTATCCGCCCGTCCAGCATCCGCATCCGCCGCTGTGGTTCGGCGGCTCGTCGCCGGCCGCTCACGC GATCGCCGCCGATCACATCGATACCTATCTGACCTGGGGCGAGCCGCCCGAGGCCGTCGCGAAGAAGATCGCCGACATCC GCGCCCGTGCCGACGCGCGCGGCCGCAAGATCAAGTTCGGCATCCGCCTGCACGTGATCGTGCGCGAGACCGAGGACGAG GCATGGCGTGACGCCGATCGGCTGATCAGCCGGCTCGACGACGACACGATCGCGCGTGCGCAGAAAGCGTTCGCGAACAT GGATTCGGAAGGCCAGCGCCGGATGGCCGCGCTGCACGGCGGCAAGCGCGGCGGCCGCGAGGCGCTCGAGGTCTATCCGA ACCTGTGGGCCGGCGTGGGGCTCGTGCGCGGCGGCGCCGGCACGGCGCTCGTCGGCAATCCCGAGCAGGTCGCGGAACGG ATGCGCGAATACGCGGATCTCGGCATCGAGACGTTCATCCTGTCCGGCTATCCGCACCTCGAGGAGTCGTATCGCTTCGC GGAACTCGTGTTCCCGCTGATCAAGGGCGAGGGTGTCAAGAAGGCGGCTGGTCCGCTGTCGGGGCCGTTCGGCGAGATCG TCGGCAACAACTATCTGCCGAAGACGAGCCAGAGCTGA
Upstream 100 bases:
>100_bases CCCGATTCGAATGCACACCATGCATGCGTCGCTCCTCCGCGACGCGAGCAGGGCGACGATTTTTCAAATTTCGGCAGTGA CAGTCAAGCAGGAGCAGCAG
Downstream 100 bases:
>100_bases GCGACGGAGGCTTGCGATGACAACGAAAACGTCGACGACGGGCGTCGCCGTGGCCGCCCGCGCGTGGCGCGGCGTCGCGC CGTGGCTCGTGCCGCTCGCG
Product: alkanesulfonate monooxygenase
Products: NA
Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase [H]
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MNVFWFIPTHGDSRYLGTAEGARAADYDYFKQVAVAADTLGYDGVLLPTGRSCEDAWVVASSLIPATQRLKFLVAVRPGI ASPGLAARMAATFDRLSGGRLLINVVTGGDAAELEGDGLFADHDTRYEITDDFLNIWRGLLAASHDNDGFDYIGKHLQSK GGKALYPPVQHPHPPLWFGGSSPAAHAIAADHIDTYLTWGEPPEAVAKKIADIRARADARGRKIKFGIRLHVIVRETEDE AWRDADRLISRLDDDTIARAQKAFANMDSEGQRRMAALHGGKRGGREALEVYPNLWAGVGLVRGGAGTALVGNPEQVAER MREYADLGIETFILSGYPHLEESYRFAELVFPLIKGEGVKKAAGPLSGPFGEIVGNNYLPKTSQS
Sequences:
>Translated_385_residues MNVFWFIPTHGDSRYLGTAEGARAADYDYFKQVAVAADTLGYDGVLLPTGRSCEDAWVVASSLIPATQRLKFLVAVRPGI ASPGLAARMAATFDRLSGGRLLINVVTGGDAAELEGDGLFADHDTRYEITDDFLNIWRGLLAASHDNDGFDYIGKHLQSK GGKALYPPVQHPHPPLWFGGSSPAAHAIAADHIDTYLTWGEPPEAVAKKIADIRARADARGRKIKFGIRLHVIVRETEDE AWRDADRLISRLDDDTIARAQKAFANMDSEGQRRMAALHGGKRGGREALEVYPNLWAGVGLVRGGAGTALVGNPEQVAER MREYADLGIETFILSGYPHLEESYRFAELVFPLIKGEGVKKAAGPLSGPFGEIVGNNYLPKTSQS >Mature_385_residues MNVFWFIPTHGDSRYLGTAEGARAADYDYFKQVAVAADTLGYDGVLLPTGRSCEDAWVVASSLIPATQRLKFLVAVRPGI ASPGLAARMAATFDRLSGGRLLINVVTGGDAAELEGDGLFADHDTRYEITDDFLNIWRGLLAASHDNDGFDYIGKHLQSK GGKALYPPVQHPHPPLWFGGSSPAAHAIAADHIDTYLTWGEPPEAVAKKIADIRARADARGRKIKFGIRLHVIVRETEDE AWRDADRLISRLDDDTIARAQKAFANMDSEGQRRMAALHGGKRGGREALEVYPNLWAGVGLVRGGAGTALVGNPEQVAER MREYADLGIETFILSGYPHLEESYRFAELVFPLIKGEGVKKAAGPLSGPFGEIVGNNYLPKTSQS
Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SsuD family [H]
Homologues:
Organism=Escherichia coli, GI1787166, Length=386, Percent_Identity=60.880829015544, Blast_Score=480, Evalue=1e-137, Organism=Escherichia coli, GI1787247, Length=247, Percent_Identity=25.9109311740891, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019911 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.14.5 [H]
Molecular weight: Translated: 41782; Mature: 41782
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVFWFIPTHGDSRYLGTAEGARAADYDYFKQVAVAADTLGYDGVLLPTGRSCEDAWVVA CCEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHH SSLIPATQRLKFLVAVRPGIASPGLAARMAATFDRLSGGRLLINVVTGGDAAELEGDGLF HHHCCHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEECCCCEE ADHDTRYEITDDFLNIWRGLLAASHDNDGFDYIGKHLQSKGGKALYPPVQHPHPPLWFGG CCCCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC SSPAAHAIAADHIDTYLTWGEPPEAVAKKIADIRARADARGRKIKFGIRLHVIVRETEDE CCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCH AWRDADRLISRLDDDTIARAQKAFANMDSEGQRRMAALHGGKRGGREALEVYPNLWAGVG HHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC LVRGGAGTALVGNPEQVAERMREYADLGIETFILSGYPHLEESYRFAELVFPLIKGEGVK EEECCCCCEEECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC KAAGPLSGPFGEIVGNNYLPKTSQS HHCCCCCCCHHHHHCCCCCCCCCCC >Mature Secondary Structure MNVFWFIPTHGDSRYLGTAEGARAADYDYFKQVAVAADTLGYDGVLLPTGRSCEDAWVVA CCEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHH SSLIPATQRLKFLVAVRPGIASPGLAARMAATFDRLSGGRLLINVVTGGDAAELEGDGLF HHHCCHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEECCCCEE ADHDTRYEITDDFLNIWRGLLAASHDNDGFDYIGKHLQSKGGKALYPPVQHPHPPLWFGG CCCCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC SSPAAHAIAADHIDTYLTWGEPPEAVAKKIADIRARADARGRKIKFGIRLHVIVRETEDE CCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCH AWRDADRLISRLDDDTIARAQKAFANMDSEGQRRMAALHGGKRGGREALEVYPNLWAGVG HHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC LVRGGAGTALVGNPEQVAERMREYADLGIETFILSGYPHLEESYRFAELVFPLIKGEGVK EEECCCCCEEECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC KAAGPLSGPFGEIVGNNYLPKTSQS HHCCCCCCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA