Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is qacE [H]
Identifier: 116689581
GI number: 116689581
Start: 1724635
End: 1724973
Strand: Direct
Name: qacE [H]
Synonym: Bcen2424_1559
Alternate gene names: 116689581
Gene position: 1724635-1724973 (Clockwise)
Preceding gene: 116689580
Following gene: 116689582
Centisome position: 49.5
GC content: 66.37
Gene sequence:
>339_bases ATGCAATTGCCCGGTTACGCATGGCTCGCGATCGCGATCGTCGCGGAAGTGATCGGCACGTCCGCGCTGCGCGCGGCGGA CGGCTTCACGCGCTTGTGGCCGTCGGTGCTCGTCGTCGCCGGTTACGGCGTCGCGTTCTACTGCCTGTCGCTCACGTTGC GCACGATGCCCGTCGGCATCATCTATGCAGTCTGGTCGGGCGCCGGCATCGTGCTGATCACGCTCGTCGCGATGCTGCTC TATCGCCAGGTGCCGGACGTGCCGGCGGTGATCGGCCTCGGGCTGATCATCGCGGGCGTCGTGGTGCTGAACCTGTTCTC GAAGATGCAGGCGCACTGA
Upstream 100 bases:
>100_bases CGGGTTGCCGCAGCGTGCGGACCACGAGTTCGTCGTCGAGGCGCTGTGTGCGGAGCTCGGCCACGACTACGCGGTACTGG CCCTCGCAAGGAGCTGAGCG
Downstream 100 bases:
>100_bases GCGTGCGACCGCCGTTTGCCGGATGACCTTCATGACCGATTCCCTTTCCGCCGCCGTTTCCGCCGAATCCGCCCAGCCCG ACGTGCGCGCCTATGTCGCG
Product: small multidrug resistance protein
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Quaternary ammonium determinant E [H]
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MQLPGYAWLAIAIVAEVIGTSALRAADGFTRLWPSVLVVAGYGVAFYCLSLTLRTMPVGIIYAVWSGAGIVLITLVAMLL YRQVPDVPAVIGLGLIIAGVVVLNLFSKMQAH
Sequences:
>Translated_112_residues MQLPGYAWLAIAIVAEVIGTSALRAADGFTRLWPSVLVVAGYGVAFYCLSLTLRTMPVGIIYAVWSGAGIVLITLVAMLL YRQVPDVPAVIGLGLIIAGVVVLNLFSKMQAH >Mature_112_residues MQLPGYAWLAIAIVAEVIGTSALRAADGFTRLWPSVLVVAGYGVAFYCLSLTLRTMPVGIIYAVWSGAGIVLITLVAMLL YRQVPDVPAVIGLGLIIAGVVVLNLFSKMQAH
Specific function: Multidrug exporter. Is implicated for the resistance to bacteriocidal quaternary ammonium compounds [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family [H]
Homologues:
Organism=Escherichia coli, GI1786755, Length=107, Percent_Identity=49.5327102803738, Blast_Score=103, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 11859; Mature: 11859
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLPGYAWLAIAIVAEVIGTSALRAADGFTRLWPSVLVVAGYGVAFYCLSLTLRTMPVGI CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYAVWSGAGIVLITLVAMLLYRQVPDVPAVIGLGLIIAGVVVLNLFSKMQAH HHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQLPGYAWLAIAIVAEVIGTSALRAADGFTRLWPSVLVVAGYGVAFYCLSLTLRTMPVGI CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYAVWSGAGIVLITLVAMLLYRQVPDVPAVIGLGLIIAGVVVLNLFSKMQAH HHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8494372 [H]