Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
---|---|
Accession | NC_008542 |
Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is ate [H]
Identifier: 116689577
GI number: 116689577
Start: 1721480
End: 1722310
Strand: Reverse
Name: ate [H]
Synonym: Bcen2424_1555
Alternate gene names: 116689577
Gene position: 1722310-1721480 (Counterclockwise)
Preceding gene: 116689578
Following gene: 116689576
Centisome position: 49.44
GC content: 66.79
Gene sequence:
>831_bases ATGACTCACCCGACTGAGCTGCCGCTTTCACCGCTTTCGGCGCTGCAATTCTATGCAACGGCGCCCTATCCGTGCAGCTA TCTGGACGGCCGCATCGCGCGCTCGCAAGTCGCGACGCCGAGCCACCTGATCAATTCCGACATCTACACCGAACTCGTGA AGGCCGGCTTCCGCCGCTCGGGCGTCTTCACGTACCGCCCGTACTGCGACGGCTGCCGCGCCTGCGTGCCGGTGCGCGTG CCGGTCGGCGAGTTCGCGCCGACGCGCACGCAGCGCAGGATGTGGAAGCGGCACCGCGCGCTGGTCGCGACAGTCTCGCC GCTGCACTACGACGAAGAGCACTACGCGCTCTACATGCGCTACCAGTCCGCGCGCCACGCAGGCGGCGGCATGGATCGCG ACAGCCGCGACCAGTACGAACAATTCCTGCTGCAAAGCCGGATCAACTCGCGCCTCGTCGAATTCCGCGACCTCGACGCA CCGGGCGGCGAACCCGGCAAGCTGCGGATGGTCAGCATGATCGACATCCTCGGCGACGGGCTGTCGTCGGTCTATACGTT CTTCGAGCCGGATGACCGGCACACGAGCTACGGCACCTACAACATCCTGTGGCAGATCGAGCAGGCGAAGAGCCTCGGGC TGCCCTACGTGTACCTCGGCTACTGGATTCGCGAGAGCCCGAAGATGGCCTACAAGGCGAACTTCCACCCGCTCGAAGGG CTGATCGACGGCCGCTGGAAGACGCTCGATCCGGAACGGATCGACCTGCCGCCCGTCGACGCGGCGCTGGCGCGCGCGCC CTTGCCGGGCGGGCATTCCGGGTCGGGCTGA
Upstream 100 bases:
>100_bases CAAGCGCGTGCTCGCCGCGCTGACGAGCCCCGCCGAAACGGCGGCGCCCACCGGGACCGAGCGCTAGCGCGGCACTCCTT CCCTGCATCGAGAGCTGCCC
Downstream 100 bases:
>100_bases CGCGCGCCGCGGCGGCTACGAAGCAAAGCACGCCCGTGCCGCGCAACTCCCGGTAAAATAGCGGGTTGTCATTCATTCCG GCTGTCCGCCCAACTCCCGT
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTHPTELPLSPLSALQFYATAPYPCSYLDGRIARSQVATPSHLINSDIYTELVKAGFRRSGVFTYRPYCDGCRACVPVRV PVGEFAPTRTQRRMWKRHRALVATVSPLHYDEEHYALYMRYQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFRDLDA PGGEPGKLRMVSMIDILGDGLSSVYTFFEPDDRHTSYGTYNILWQIEQAKSLGLPYVYLGYWIRESPKMAYKANFHPLEG LIDGRWKTLDPERIDLPPVDAALARAPLPGGHSGSG
Sequences:
>Translated_276_residues MTHPTELPLSPLSALQFYATAPYPCSYLDGRIARSQVATPSHLINSDIYTELVKAGFRRSGVFTYRPYCDGCRACVPVRV PVGEFAPTRTQRRMWKRHRALVATVSPLHYDEEHYALYMRYQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFRDLDA PGGEPGKLRMVSMIDILGDGLSSVYTFFEPDDRHTSYGTYNILWQIEQAKSLGLPYVYLGYWIRESPKMAYKANFHPLEG LIDGRWKTLDPERIDLPPVDAALARAPLPGGHSGSG >Mature_275_residues THPTELPLSPLSALQFYATAPYPCSYLDGRIARSQVATPSHLINSDIYTELVKAGFRRSGVFTYRPYCDGCRACVPVRVP VGEFAPTRTQRRMWKRHRALVATVSPLHYDEEHYALYMRYQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFRDLDAP GGEPGKLRMVSMIDILGDGLSSVYTFFEPDDRHTSYGTYNILWQIEQAKSLGLPYVYLGYWIRESPKMAYKANFHPLEGL IDGRWKTLDPERIDLPPVDAALARAPLPGGHSGSG
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential) [H]
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI32563965, Length=149, Percent_Identity=32.8859060402685, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI32563963, Length=149, Percent_Identity=32.8859060402685, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 [H]
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N [H]
EC number: =2.3.2.8 [H]
Molecular weight: Translated: 31265; Mature: 31134
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPTELPLSPLSALQFYATAPYPCSYLDGRIARSQVATPSHLINSDIYTELVKAGFRRS CCCCCCCCCCHHHHHHHHCCCCCCHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC GVFTYRPYCDGCRACVPVRVPVGEFAPTRTQRRMWKRHRALVATVSPLHYDEEHYALYMR CCEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCEECCCCEEEEEE YQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFRDLDAPGGEPGKLRMVSMIDILGDG EHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHCC LSSVYTFFEPDDRHTSYGTYNILWQIEQAKSLGLPYVYLGYWIRESPKMAYKANFHPLEG HHHHEEEECCCCCCCCCCEEEEEEEEEHHHHCCCCEEEEHHHHHCCCCCEEECCCCCHHH LIDGRWKTLDPERIDLPPVDAALARAPLPGGHSGSG CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure THPTELPLSPLSALQFYATAPYPCSYLDGRIARSQVATPSHLINSDIYTELVKAGFRRS CCCCCCCCCHHHHHHHHCCCCCCHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC GVFTYRPYCDGCRACVPVRVPVGEFAPTRTQRRMWKRHRALVATVSPLHYDEEHYALYMR CCEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCEECCCCEEEEEE YQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFRDLDAPGGEPGKLRMVSMIDILGDG EHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHCC LSSVYTFFEPDDRHTSYGTYNILWQIEQAKSLGLPYVYLGYWIRESPKMAYKANFHPLEG HHHHEEEECCCCCCCCCCEEEEEEEEEHHHHCCCCEEEEHHHHHCCCCCEEECCCCCHHH LIDGRWKTLDPERIDLPPVDAALARAPLPGGHSGSG CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA