Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is aat [H]
Identifier: 116689578
GI number: 116689578
Start: 1722344
End: 1723108
Strand: Reverse
Name: aat [H]
Synonym: Bcen2424_1556
Alternate gene names: 116689578
Gene position: 1723108-1722344 (Counterclockwise)
Preceding gene: 116689579
Following gene: 116689577
Centisome position: 49.46
GC content: 69.28
Gene sequence:
>765_bases ATGGTTCCCTGGCTCGGCCCGGACGATCCGTTTCCGTCCATCGAACGCGCGCTCGGTCCCGCGACCGGGGCGCCCGGGCT GCTCGCCGCGAGCGCCGACCTGCTGCCGTCGCGGCTCATCGACGCCTACCTGCGCGGCATCTTCCCGTGGTACTCGGACG GCCAGCCGGTGCTGTGGTGGAGCCCCGACCCGCGCATGATCCTCGTGCCGGCCGAATTCAAGGTATCGCCGTCGCTGCGC AAGACGCTGAAGCGCGTGCTGCGCGCGCCGGAATGGGAAGTGCGCGTCGATCACGATTTTGCCGGCGTGATGCGGGCATG CGCCCAGGCGCCGCGCCGCGGGCAACGCGGCACGTGGATCACCGCCGAGATCATCGACGCCTATACGTCGCTCTACCGCT CCGGCAACGCGCACAGCATCGAGACGTGGCACGACGGGCGCCGCGTCGGCGGCCTGTACGGCGTGTCGTTCGGCCGGATG TTTTTCGGCGAGTCGATGTATGCGGACGTGACCGATGCGTCGAAAATCGCGCTGGCCGCGCTCATCGCGCACCTTCGCGA GCAGAGGCTGGAGATGATAGACTGCCAGCAGAATACGTCGCATCTAGCGTCGCTCGGCGGCCGCGAGATCGCACGCAAGG CCTTTGTCGCTCACGTGCGCAGCGCGGTAGCCGAACCGCCGATTCCGTGGCAGTTCGACAAGCGCGTGCTCGCCGCGCTG ACGAGCCCCGCCGAAACGGCGGCGCCCACCGGGACCGAGCGCTAG
Upstream 100 bases:
>100_bases AGACCCTGCGCTTCTTCTTCGCGGATCGCGCCGCCGGCGACTACGGCGTGCACACCGGCGACATCTTCCGCTCGCTGCGC AACGGCTGAGCCCCGCACCC
Downstream 100 bases:
>100_bases CGCGGCACTCCTTCCCTGCATCGAGAGCTGCCCATGACTCACCCGACTGAGCTGCCGCTTTCACCGCTTTCGGCGCTGCA ATTCTATGCAACGGCGCCCT
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MVPWLGPDDPFPSIERALGPATGAPGLLAASADLLPSRLIDAYLRGIFPWYSDGQPVLWWSPDPRMILVPAEFKVSPSLR KTLKRVLRAPEWEVRVDHDFAGVMRACAQAPRRGQRGTWITAEIIDAYTSLYRSGNAHSIETWHDGRRVGGLYGVSFGRM FFGESMYADVTDASKIALAALIAHLREQRLEMIDCQQNTSHLASLGGREIARKAFVAHVRSAVAEPPIPWQFDKRVLAAL TSPAETAAPTGTER
Sequences:
>Translated_254_residues MVPWLGPDDPFPSIERALGPATGAPGLLAASADLLPSRLIDAYLRGIFPWYSDGQPVLWWSPDPRMILVPAEFKVSPSLR KTLKRVLRAPEWEVRVDHDFAGVMRACAQAPRRGQRGTWITAEIIDAYTSLYRSGNAHSIETWHDGRRVGGLYGVSFGRM FFGESMYADVTDASKIALAALIAHLREQRLEMIDCQQNTSHLASLGGREIARKAFVAHVRSAVAEPPIPWQFDKRVLAAL TSPAETAAPTGTER >Mature_254_residues MVPWLGPDDPFPSIERALGPATGAPGLLAASADLLPSRLIDAYLRGIFPWYSDGQPVLWWSPDPRMILVPAEFKVSPSLR KTLKRVLRAPEWEVRVDHDFAGVMRACAQAPRRGQRGTWITAEIIDAYTSLYRSGNAHSIETWHDGRRVGGLYGVSFGRM FFGESMYADVTDASKIALAALIAHLREQRLEMIDCQQNTSHLASLGGREIARKAFVAHVRSAVAEPPIPWQFDKRVLAAL TSPAETAAPTGTER
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=211, Percent_Identity=42.1800947867299, Blast_Score=166, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 28030; Mature: 28030
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPWLGPDDPFPSIERALGPATGAPGLLAASADLLPSRLIDAYLRGIFPWYSDGQPVLWW CCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE SPDPRMILVPAEFKVSPSLRKTLKRVLRAPEWEVRVDHDFAGVMRACAQAPRRGQRGTWI CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCEE TAEIIDAYTSLYRSGNAHSIETWHDGRRVGGLYGVSFGRMFFGESMYADVTDASKIALAA HHHHHHHHHHHHHCCCCCEECHHHCCCHHCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHH LIAHLREQRLEMIDCQQNTSHLASLGGREIARKAFVAHVRSAVAEPPIPWQFDKRVLAAL HHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TSPAETAAPTGTER CCCHHHCCCCCCCC >Mature Secondary Structure MVPWLGPDDPFPSIERALGPATGAPGLLAASADLLPSRLIDAYLRGIFPWYSDGQPVLWW CCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE SPDPRMILVPAEFKVSPSLRKTLKRVLRAPEWEVRVDHDFAGVMRACAQAPRRGQRGTWI CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCEE TAEIIDAYTSLYRSGNAHSIETWHDGRRVGGLYGVSFGRMFFGESMYADVTDASKIALAA HHHHHHHHHHHHHCCCCCEECHHHCCCHHCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHH LIAHLREQRLEMIDCQQNTSHLASLGGREIARKAFVAHVRSAVAEPPIPWQFDKRVLAAL HHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TSPAETAAPTGTER CCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA