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The map label for this gene is ydhJ [H]

Identifier: 116689468

GI number: 116689468

Start: 1600223

End: 1601098

Strand: Reverse

Name: ydhJ [H]

Synonym: Bcen2424_1446

Alternate gene names: 116689468

Gene position: 1601098-1600223 (Counterclockwise)

Preceding gene: 116689469

Following gene: 116689466

Centisome position: 45.96

GC content: 65.98

Gene sequence:

>876_bases
ATGATTCTCAGAAAACTCTTCGGCTTCGTCGCGACCGCCATCATCCTTCTCGTCGCGATCCTGATCGGGCGCTCGCTGTG
GGTGCACTACATGGATGATCCGTGGACGCGCGACGGGCGCGTGCGCGCCGAGATCGTCAACGTCGCGCCGGACGTGTCGG
GCGCGATCGTCGAGCTGCCCGTGCATGACAACCAGCTCGTGAAGAAAGGCGACCTGATCATGCAGATCGACCCGTCGCAC
TACCAGATCGCGGTCGAGCAGGCGCAGGCGGCGGTGGCCGCCCGCCGCGCGGAACTGCAGATGCGCCGCGACGACGCGGC
CCGCCGCGCGGACCTCGATGCGCTCGTCGTGTCGAAGGAAAACCGCGAGAACGCCGCGCACAGCGCATCGAGCGCCGACG
CACAGTATCAGCAGGCGCTCGCCGCGCTCGACGCCGCGAAGCTCAACCTCGAGCGCACGCGCGTCGTCGCGCCGGTCGAC
GGCTACATCACGAACCTGCAGACCTTCAAGGGCAACTATGCGGTGGCCGGCCAGGCGAAGCTCGCGATCGTCGACAGCCA
CTCGTTCTGGGTCTACGGCTACTTCGAGGAAACCAAGCTGCCGCGCGTGAAGATCGGCGCACCGGCCGAAATGCGGCTGA
TGAGCGGCGGCGTGATGAAGGGCCACGTGGAAAGCATCTCGCGTGGTATCTACGATCGCGACAACCCGCAAAGCCGCGAC
CTCGTCGCCGACGTGAACCCGACCTTCAACTGGGTGCGCCTCGCGCAGCGCGTGCCGGTACGCATCAAGATCGACGAAGT
GCCGGCCGACGTGGTGCTGTCGGCGGGCACGACCTGCACGGTCATCATCGATCCCGACAAGCAGAAGAAGTCGTAA

Upstream 100 bases:

>100_bases
CTACCGTCTCGTCTGGCACCCGTCGCTGTTCCGGGCCTGCCTTCTCGTCTGCATTTGCGGCGGACTGAGTCTTGCCGTTT
ACCGTTGATTCCGAACCATC

Downstream 100 bases:

>100_bases
TCGCCGGGGCGTGCCGCACGCTCAGTGCGCGATGCGGAAACGCCCGACCAGCGCCTTCAGCGCCTGAGCCTGCTCGTCGA
GCGCGTTCGCGGCAGCCGCC

Product: secretion protein HlyD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MILRKLFGFVATAIILLVAILIGRSLWVHYMDDPWTRDGRVRAEIVNVAPDVSGAIVELPVHDNQLVKKGDLIMQIDPSH
YQIAVEQAQAAVAARRAELQMRRDDAARRADLDALVVSKENRENAAHSASSADAQYQQALAALDAAKLNLERTRVVAPVD
GYITNLQTFKGNYAVAGQAKLAIVDSHSFWVYGYFEETKLPRVKIGAPAEMRLMSGGVMKGHVESISRGIYDRDNPQSRD
LVADVNPTFNWVRLAQRVPVRIKIDEVPADVVLSAGTTCTVIIDPDKQKKS

Sequences:

>Translated_291_residues
MILRKLFGFVATAIILLVAILIGRSLWVHYMDDPWTRDGRVRAEIVNVAPDVSGAIVELPVHDNQLVKKGDLIMQIDPSH
YQIAVEQAQAAVAARRAELQMRRDDAARRADLDALVVSKENRENAAHSASSADAQYQQALAALDAAKLNLERTRVVAPVD
GYITNLQTFKGNYAVAGQAKLAIVDSHSFWVYGYFEETKLPRVKIGAPAEMRLMSGGVMKGHVESISRGIYDRDNPQSRD
LVADVNPTFNWVRLAQRVPVRIKIDEVPADVVLSAGTTCTVIIDPDKQKKS
>Mature_291_residues
MILRKLFGFVATAIILLVAILIGRSLWVHYMDDPWTRDGRVRAEIVNVAPDVSGAIVELPVHDNQLVKKGDLIMQIDPSH
YQIAVEQAQAAVAARRAELQMRRDDAARRADLDALVVSKENRENAAHSASSADAQYQQALAALDAAKLNLERTRVVAPVD
GYITNLQTFKGNYAVAGQAKLAIVDSHSFWVYGYFEETKLPRVKIGAPAEMRLMSGGVMKGHVESISRGIYDRDNPQSRD
LVADVNPTFNWVRLAQRVPVRIKIDEVPADVVLSAGTTCTVIIDPDKQKKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=280, Percent_Identity=46.0714285714286, Blast_Score=253, Evalue=1e-68,
Organism=Escherichia coli, GI1789637, Length=283, Percent_Identity=40.6360424028269, Blast_Score=213, Evalue=9e-57,
Organism=Escherichia coli, GI1790519, Length=307, Percent_Identity=30.2931596091205, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1788711, Length=339, Percent_Identity=25.9587020648968, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789041, Length=301, Percent_Identity=24.5847176079734, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87082036, Length=136, Percent_Identity=33.0882352941176, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790012, Length=277, Percent_Identity=24.5487364620939, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI87081796, Length=182, Percent_Identity=29.6703296703297, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 32122; Mature: 32122

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILRKLFGFVATAIILLVAILIGRSLWVHYMDDPWTRDGRVRAEIVNVAPDVSGAIVELP
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEE
VHDNQLVKKGDLIMQIDPSHYQIAVEQAQAAVAARRAELQMRRDDAARRADLDALVVSKE
CCCCCCEECCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
NRENAAHSASSADAQYQQALAALDAAKLNLERTRVVAPVDGYITNLQTFKGNYAVAGQAK
CCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHEEECCCEEEECCEE
LAIVDSHSFWVYGYFEETKLPRVKIGAPAEMRLMSGGVMKGHVESISRGIYDRDNPQSRD
EEEEECCCEEEEEEEECCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC
LVADVNPTFNWVRLAQRVPVRIKIDEVPADVVLSAGTTCTVIIDPDKQKKS
EEEECCCCHHHHHHHHCCCEEEEEECCCCEEEEECCCEEEEEECCCCCCCC
>Mature Secondary Structure
MILRKLFGFVATAIILLVAILIGRSLWVHYMDDPWTRDGRVRAEIVNVAPDVSGAIVELP
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEE
VHDNQLVKKGDLIMQIDPSHYQIAVEQAQAAVAARRAELQMRRDDAARRADLDALVVSKE
CCCCCCEECCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
NRENAAHSASSADAQYQQALAALDAAKLNLERTRVVAPVDGYITNLQTFKGNYAVAGQAK
CCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHEEECCCEEEECCEE
LAIVDSHSFWVYGYFEETKLPRVKIGAPAEMRLMSGGVMKGHVESISRGIYDRDNPQSRD
EEEEECCCEEEEEEEECCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC
LVADVNPTFNWVRLAQRVPVRIKIDEVPADVVLSAGTTCTVIIDPDKQKKS
EEEECCCCHHHHHHHHCCCEEEEEECCCCEEEEECCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]