Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689469

Identifier: 116689469

GI number: 116689469

Start: 1601111

End: 1601314

Strand: Reverse

Name: 116689469

Synonym: Bcen2424_1447

Alternate gene names: NA

Gene position: 1601314-1601111 (Counterclockwise)

Preceding gene: 116689470

Following gene: 116689468

Centisome position: 45.96

GC content: 62.25

Gene sequence:

>204_bases
ATGATGCCGCGTGAAATCGCCATTCTCGATGCCTACATGCCGACGGTGGTGCTGATGTTCGTCCTCGGCGCGATCGCGAC
CTGGGCTGTCGACCGCCTGCTCGCCTATACGGGCCTCTACCGTCTCGTCTGGCACCCGTCGCTGTTCCGGGCCTGCCTTC
TCGTCTGCATTTGCGGCGGACTGAGTCTTGCCGTTTACCGTTGA

Upstream 100 bases:

>100_bases
GCCACCTGCATTTCGTGCGGACCGCGCTGCTCGACCCGGAATCGCCGCTCGAGCCGCTCAACCGCAACCGCCCCGTGCAT
CCCCAACCAGGAGCCTCGTC

Downstream 100 bases:

>100_bases
TTCCGAACCATCATGATTCTCAGAAAACTCTTCGGCTTCGTCGCGACCGCCATCATCCTTCTCGTCGCGATCCTGATCGG
GCGCTCGCTGTGGGTGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MMPREIAILDAYMPTVVLMFVLGAIATWAVDRLLAYTGLYRLVWHPSLFRACLLVCICGGLSLAVYR

Sequences:

>Translated_67_residues
MMPREIAILDAYMPTVVLMFVLGAIATWAVDRLLAYTGLYRLVWHPSLFRACLLVCICGGLSLAVYR
>Mature_67_residues
MMPREIAILDAYMPTVVLMFVLGAIATWAVDRLLAYTGLYRLVWHPSLFRACLLVCICGGLSLAVYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7519; Mature: 7519

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPREIAILDAYMPTVVLMFVLGAIATWAVDRLLAYTGLYRLVWHPSLFRACLLVCICGG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
LSLAVYR
HHHHHCC
>Mature Secondary Structure
MMPREIAILDAYMPTVVLMFVLGAIATWAVDRLLAYTGLYRLVWHPSLFRACLLVCICGG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
LSLAVYR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA