Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is fsr [H]
Identifier: 116689466
GI number: 116689466
Start: 1596884
End: 1598122
Strand: Reverse
Name: fsr [H]
Synonym: Bcen2424_1444
Alternate gene names: 116689466
Gene position: 1598122-1596884 (Counterclockwise)
Preceding gene: 116689468
Following gene: 116689463
Centisome position: 45.87
GC content: 67.15
Gene sequence:
>1239_bases ATGGAAACCAGCCTCGACTCCGGAGCCGCCGGCGCAGCCGCCGCCCAGCCGTCCGCATCGCCCGTCGCCCGCACCATCTA CCCGGTGCTCGGCGCGATCAGCTTCTCGCACATGCTCAACGACATGATCCAGTCGCTGATCCTCGCGATCTATCCGATGC TCAAGAGCCAGTTCGCGCTGTCGTTCGCGCAGATCGGCCTGATCACGCTCACTTACCAGATCACCGCGTCGCTGCTGCAG CCGCTCGTGGGCCTCTATACCGACAAGCATCCGAAGCCGTATTCGCTGCCGGTCGGCATGGGCTTCACGCTCGCGGGGCT GCTGCTGATGTCGGCCGCGCCGAATTTCCCGATGCTGCTGGTGGCCGCCGCGCTCGTCGGCTGCGGCTCGTCGGTGTTCC ACCCCGAATCGTCGCGGGTCGCGCGGATGGCGTCGGGCGGCCGGCACGGGCTCGCGCAGTCGGTGTTCCAGGTGGGCGGC AATGCCGGCTCCGCGCTCGGGCCGCTGCTCGCCGCGCTCGTGATCATTCCGCACGGCCAGCACAGCATCGCTTGGTTTTC GGCGGCCGCGCTCGTCGCGATGATCGTGCTCACGCAGATCGGCCACTGGTACAAGAAGCATCCGTCGATGAAGAAGAAGG CCGCCTCGGCCGGCCACCCGACGCTGTCGCGCGGCCGCGTGATGGCCGCGATCGGCGTGCTGGTGCTGCTCGTGTTCTCG AAGTACTTCTACCTCGCGAGCATCAACAGCTATTTCACGTTCTACCTGATCGACAAGTTCCACCTGTCGGTGCAGGCCGC GCAGATCCACCTGTTCGTGTTCCTCGCGGCGGTGGCGGCCGGCACGCTGATCGGCGGGCCCGTCGGCGACCGGATCGGCC GCAAGTACGTGATCTGGGTGTCGATCCTGGGCGTCGCGCCGTTCACGATGCTGCTGCCGTACGCGAACCTGTTCTGGACG AGCGTGCTGACCGTGATCATCGGCGTCGTGCTGGCGTCGGCGTTCGCCGCGATCCTCGTCTATGCGACGGAGCTGATGCC CGGCAAGGTCGGGATGGTCGCGGGCCTGTTCTTCGGCTTCGCGTTCGGCCTGGGCGGCGTCGGCGCGGCCGTGCTCGGCC AGCTCGCCGATGCGACGAGCATCCCGTTCGTCTACAAGGTGTGCTCGTTCCTGCCGCTGATCGGCGTGCTGACGGTGTTC CTGCCGAACCTCGAAAGCAGCCGGCGCAAAAAGGCGTGA
Upstream 100 bases:
>100_bases TTCTCTATACGCCACATTACACTTCTTTGACGCATCAACGAATCGACAACGCGCCGATCCCCAACAGAGCGCGCCAGCCA CCTCAACTCGTTCAGCTCAC
Downstream 100 bases:
>100_bases CGAACGACTGGCCGCGGCGTGCGCGCCGCGGCCAGTCGAGCGGTTTGATGGGAAAAGTACGAGACGGCGGCTTCAGGCCG CCGTCGTCGCATGCAGCGTC
Product: major facilitator transporter
Products: fosmidomycin [Periplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues METSLDSGAAGAAAAQPSASPVARTIYPVLGAISFSHMLNDMIQSLILAIYPMLKSQFALSFAQIGLITLTYQITASLLQ PLVGLYTDKHPKPYSLPVGMGFTLAGLLLMSAAPNFPMLLVAAALVGCGSSVFHPESSRVARMASGGRHGLAQSVFQVGG NAGSALGPLLAALVIIPHGQHSIAWFSAAALVAMIVLTQIGHWYKKHPSMKKKAASAGHPTLSRGRVMAAIGVLVLLVFS KYFYLASINSYFTFYLIDKFHLSVQAAQIHLFVFLAAVAAGTLIGGPVGDRIGRKYVIWVSILGVAPFTMLLPYANLFWT SVLTVIIGVVLASAFAAILVYATELMPGKVGMVAGLFFGFAFGLGGVGAAVLGQLADATSIPFVYKVCSFLPLIGVLTVF LPNLESSRRKKA
Sequences:
>Translated_412_residues METSLDSGAAGAAAAQPSASPVARTIYPVLGAISFSHMLNDMIQSLILAIYPMLKSQFALSFAQIGLITLTYQITASLLQ PLVGLYTDKHPKPYSLPVGMGFTLAGLLLMSAAPNFPMLLVAAALVGCGSSVFHPESSRVARMASGGRHGLAQSVFQVGG NAGSALGPLLAALVIIPHGQHSIAWFSAAALVAMIVLTQIGHWYKKHPSMKKKAASAGHPTLSRGRVMAAIGVLVLLVFS KYFYLASINSYFTFYLIDKFHLSVQAAQIHLFVFLAAVAAGTLIGGPVGDRIGRKYVIWVSILGVAPFTMLLPYANLFWT SVLTVIIGVVLASAFAAILVYATELMPGKVGMVAGLFFGFAFGLGGVGAAVLGQLADATSIPFVYKVCSFLPLIGVLTVF LPNLESSRRKKA >Mature_412_residues METSLDSGAAGAAAAQPSASPVARTIYPVLGAISFSHMLNDMIQSLILAIYPMLKSQFALSFAQIGLITLTYQITASLLQ PLVGLYTDKHPKPYSLPVGMGFTLAGLLLMSAAPNFPMLLVAAALVGCGSSVFHPESSRVARMASGGRHGLAQSVFQVGG NAGSALGPLLAALVIIPHGQHSIAWFSAAALVAMIVLTQIGHWYKKHPSMKKKAASAGHPTLSRGRVMAAIGVLVLLVFS KYFYLASINSYFTFYLIDKFHLSVQAAQIHLFVFLAAVAAGTLIGGPVGDRIGRKYVIWVSILGVAPFTMLLPYANLFWT SVLTVIIGVVLASAFAAILVYATELMPGKVGMVAGLFFGFAFGLGGVGAAVLGQLADATSIPFVYKVCSFLPLIGVLTVF LPNLESSRRKKA
Specific function: Confers the resistance against fosmidomycin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786686, Length=404, Percent_Identity=66.3366336633663, Blast_Score=498, Evalue=1e-142,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43334; Mature: 43334
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METSLDSGAAGAAAAQPSASPVARTIYPVLGAISFSHMLNDMIQSLILAIYPMLKSQFAL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFAQIGLITLTYQITASLLQPLVGLYTDKHPKPYSLPVGMGFTLAGLLLMSAAPNFPMLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH VAAALVGCGSSVFHPESSRVARMASGGRHGLAQSVFQVGGNAGSALGPLLAALVIIPHGQ HHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC HSIAWFSAAALVAMIVLTQIGHWYKKHPSMKKKAASAGHPTLSRGRVMAAIGVLVLLVFS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH KYFYLASINSYFTFYLIDKFHLSVQAAQIHLFVFLAAVAAGTLIGGPVGDRIGRKYVIWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEHHH SILGVAPFTMLLPYANLFWTSVLTVIIGVVLASAFAAILVYATELMPGKVGMVAGLFFGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AFGLGGVGAAVLGQLADATSIPFVYKVCSFLPLIGVLTVFLPNLESSRRKKA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure METSLDSGAAGAAAAQPSASPVARTIYPVLGAISFSHMLNDMIQSLILAIYPMLKSQFAL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFAQIGLITLTYQITASLLQPLVGLYTDKHPKPYSLPVGMGFTLAGLLLMSAAPNFPMLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH VAAALVGCGSSVFHPESSRVARMASGGRHGLAQSVFQVGGNAGSALGPLLAALVIIPHGQ HHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC HSIAWFSAAALVAMIVLTQIGHWYKKHPSMKKKAASAGHPTLSRGRVMAAIGVLVLLVFS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH KYFYLASINSYFTFYLIDKFHLSVQAAQIHLFVFLAAVAAGTLIGGPVGDRIGRKYVIWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEHHH SILGVAPFTMLLPYANLFWTSVLTVIIGVVLASAFAAILVYATELMPGKVGMVAGLFFGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AFGLGGVGAAVLGQLADATSIPFVYKVCSFLPLIGVLTVFLPNLESSRRKKA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: fosmidomycin [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: fosmidomycin [Cytoplasm] + Proton [Periplasm] = fosmidomycin [Periplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8917080; 9278503 [H]