Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689353
Identifier: 116689353
GI number: 116689353
Start: 1466792
End: 1467805
Strand: Reverse
Name: 116689353
Synonym: Bcen2424_1331
Alternate gene names: NA
Gene position: 1467805-1466792 (Counterclockwise)
Preceding gene: 116689354
Following gene: 116689352
Centisome position: 42.13
GC content: 67.06
Gene sequence:
>1014_bases ATGTCCGATCGCCCCAGCCATCGCGACCCGCGCGTGCCGGTTGCCACTCTCGCGATGCTGTGCGGCGTCGCCTTCGGCGC GCCCGCGGCGCTGGCGGAGCAGCCTGACGATGCCGCCGCCACGCCGGCCGTGCAGCCTCCGGCCCCCGCGACCGTCATCA CGCCACGGATGCGCGACGAGTCGATGTTCGTGCGCGTGGACGCCGAAGGCCTGCCGGACGGCGTGCCGCTCGCCGAGTTC ACGCCCGAGGATACGAACCGCCCGCCGCTGCCCGATGCAGTCGTCACGCATGTGCAGGCGCCGCAGGAATCGCACACCGA ATTGACGCTCGGCTATTCGAACGCACACCTGACGCACGGCTACGGCGACTGGTACGGCGTGCATCTGCGCGGCGTCTACC AGGATGGCGGCCGCACCGTGCTCGGCGAATTGGCGCAACTGCACCGCTTCGGCGAGAACACGCAGCTCGGCGCGCTGACC TACGTGCAGGACCTCGGCCCCGACTGGTTCGGCGGGATCGGCTTTTCCGGCACCACATCGGGCACGATCCTGCCGAGTGC GCGCGTCGACGTGTCGATCAACCGCAAGCTATTGTCCGATCGTTCGCTGGTCGTGTCGCTCGGCGCCGGCTACGCATGGA ACCGCAGCGGCCACCGCGATCAGCTGTATCACGCCGGCGTGATCTGGTATGCATTGCCGAAGTGGATTTTCGAGGCGGGC GCGAACTATACGGTCGATTCACCCGGATCGGTGAAGGCGCCGGCGTACTACGGCGCCGTCACCTACGGCGAAGTCGGCAA GAGCGTGATCGTGCTGCGCGGCGGCGTCGGCCGCGAGGCGTATCAGGTCACCGGGTCCGGCACGCAAATCGCGGATTTCC GCAGCCACGAGATCACCGCGAAATGGCGCTACTGGTTCACGCGCAAGTGGGGAACGCAGCTCGAATTCGACTATTACCAC AACCCGTACTACTCACGAATCGGCGGCGAGCTCAGCGTCTTCTATCGCTGGTAA
Upstream 100 bases:
>100_bases TGCGCGCGCGACGTCTCGATCATCAATCATGCCTGCGTGCATGGCGATCTCGTGGCGTGGCGCAGCGGCTGGTTCCACAC ATCCCGTTAAGGAGCGCCTC
Downstream 100 bases:
>100_bases CCGGGCGGGCGCCATGCACACGCATCCCGTCCGTCCTCCCGTCGATCGTTCGCTGCGCACCCACGCGTACCCGCAGCGCT GGCTGTCGTCGATCGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: DTDP-Glucose Pyrophosphorylase
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSDRPSHRDPRVPVATLAMLCGVAFGAPAALAEQPDDAAATPAVQPPAPATVITPRMRDESMFVRVDAEGLPDGVPLAEF TPEDTNRPPLPDAVVTHVQAPQESHTELTLGYSNAHLTHGYGDWYGVHLRGVYQDGGRTVLGELAQLHRFGENTQLGALT YVQDLGPDWFGGIGFSGTTSGTILPSARVDVSINRKLLSDRSLVVSLGAGYAWNRSGHRDQLYHAGVIWYALPKWIFEAG ANYTVDSPGSVKAPAYYGAVTYGEVGKSVIVLRGGVGREAYQVTGSGTQIADFRSHEITAKWRYWFTRKWGTQLEFDYYH NPYYSRIGGELSVFYRW
Sequences:
>Translated_337_residues MSDRPSHRDPRVPVATLAMLCGVAFGAPAALAEQPDDAAATPAVQPPAPATVITPRMRDESMFVRVDAEGLPDGVPLAEF TPEDTNRPPLPDAVVTHVQAPQESHTELTLGYSNAHLTHGYGDWYGVHLRGVYQDGGRTVLGELAQLHRFGENTQLGALT YVQDLGPDWFGGIGFSGTTSGTILPSARVDVSINRKLLSDRSLVVSLGAGYAWNRSGHRDQLYHAGVIWYALPKWIFEAG ANYTVDSPGSVKAPAYYGAVTYGEVGKSVIVLRGGVGREAYQVTGSGTQIADFRSHEITAKWRYWFTRKWGTQLEFDYYH NPYYSRIGGELSVFYRW >Mature_336_residues SDRPSHRDPRVPVATLAMLCGVAFGAPAALAEQPDDAAATPAVQPPAPATVITPRMRDESMFVRVDAEGLPDGVPLAEFT PEDTNRPPLPDAVVTHVQAPQESHTELTLGYSNAHLTHGYGDWYGVHLRGVYQDGGRTVLGELAQLHRFGENTQLGALTY VQDLGPDWFGGIGFSGTTSGTILPSARVDVSINRKLLSDRSLVVSLGAGYAWNRSGHRDQLYHAGVIWYALPKWIFEAGA NYTVDSPGSVKAPAYYGAVTYGEVGKSVIVLRGGVGREAYQVTGSGTQIADFRSHEITAKWRYWFTRKWGTQLEFDYYHN PYYSRIGGELSVFYRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36921; Mature: 36789
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRPSHRDPRVPVATLAMLCGVAFGAPAALAEQPDDAAATPAVQPPAPATVITPRMRDE CCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCC SMFVRVDAEGLPDGVPLAEFTPEDTNRPPLPDAVVTHVQAPQESHTELTLGYSNAHLTHG EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCEEECC YGDWYGVHLRGVYQDGGRTVLGELAQLHRFGENTQLGALTYVQDLGPDWFGGIGFSGTTS CCCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHCCCCCCCCCC GTILPSARVDVSINRKLLSDRSLVVSLGAGYAWNRSGHRDQLYHAGVIWYALPKWIFEAG CEECCCCEEEEEECHHHHCCCEEEEEECCCEEECCCCCCCHHEECCCHHHHHHHHHHHCC ANYTVDSPGSVKAPAYYGAVTYGEVGKSVIVLRGGVGREAYQVTGSGTQIADFRSHEITA CCEEECCCCCEECCEEECEEEHHCCCCEEEEEECCCCCCEEEEECCCCEEEECCCCEEEE KWRYWFTRKWGTQLEFDYYHNPYYSRIGGELSVFYRW EEEEEEEECCCCEEEEEECCCCHHHHCCCCEEEEEEC >Mature Secondary Structure SDRPSHRDPRVPVATLAMLCGVAFGAPAALAEQPDDAAATPAVQPPAPATVITPRMRDE CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCC SMFVRVDAEGLPDGVPLAEFTPEDTNRPPLPDAVVTHVQAPQESHTELTLGYSNAHLTHG EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCEEECC YGDWYGVHLRGVYQDGGRTVLGELAQLHRFGENTQLGALTYVQDLGPDWFGGIGFSGTTS CCCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHCCCCCCCCCC GTILPSARVDVSINRKLLSDRSLVVSLGAGYAWNRSGHRDQLYHAGVIWYALPKWIFEAG CEECCCCEEEEEECHHHHCCCEEEEEECCCEEECCCCCCCHHEECCCHHHHHHHHHHHCC ANYTVDSPGSVKAPAYYGAVTYGEVGKSVIVLRGGVGREAYQVTGSGTQIADFRSHEITA CCEEECCCCCEECCEEECEEEHHCCCCEEEEEECCCCCCEEEEECCCCEEEECCCCEEEE KWRYWFTRKWGTQLEFDYYHNPYYSRIGGELSVFYRW EEEEEEEECCCCEEEEEECCCCHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA