Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689354
Identifier: 116689354
GI number: 116689354
Start: 1467816
End: 1468811
Strand: Reverse
Name: 116689354
Synonym: Bcen2424_1332
Alternate gene names: NA
Gene position: 1468811-1467816 (Counterclockwise)
Preceding gene: 116689355
Following gene: 116689353
Centisome position: 42.16
GC content: 71.59
Gene sequence:
>996_bases ATGACGACCTTCAATGTGATGGTGCCGGTGGCCAGCGTACTCGCCCTGCCGTTCCTGCCGATGCTGCATGAACTGATCCG GCGCAGCGACGTCGCGGCACTCCCGATCGGCGACGGGCCGTTCGTCGATCAGGCGCTGCTCGCCGCGCGCTGGCACGACG CGCTGCGTGCCCACGTGGCCGGCACGCCGCCGGCGGATGCGTCGGCCGTGCCGCCGTGGCAAACGCTCGGGCTGGCCGTG CAGCACGCGGACGCGATCCACGTCGCACGTGACGCGCATCGCGACGACGTGCTCTACGCCGATCGCACGATCACGCTCGA CGAAGGCGCGCAGGCCGCGTACGCGTTCGCCGACGAGCACATCGACATCCATGCCGGCGCGACGATCGGCACGCTCGCGC ATGCGCCGCTGATCGACGTCGACGACGCAGTGCTGCGCGGCGTCGTGGTCGGCGACACCGTGCGCCTGCGCGGCGCCGGC GGCTTCGCGTGCCTGTACGGCGAGCCGCTCGTCTTCGGCGCGGCGCCCGGCCCGCGACCCGCTGACGCACCGGCCGCCCC GCGCCGCGCGATCTCGCTCACCCGCCACTTCGCGTCGCTGCCGCATCGCTTCGTGCACGGCCGTTACCTGCTGCCGTGCG ACGTTCGCCTGCCCGCACACACGGTCGTGCAGGGCAACCTGATCGTCGAAGGCGCGCTCGTCCTCGGTGAAGGCTGCGTG CTGCGCGGCAGCGTCAAGGCGCATCGCGTCGAACTCGAACGTCATGCGTTGCTGCACGGTGCGGTATTCGCGCGCGACGA CGTGTTGCTCGCCCACGCGAGCTGCATCGACGGCGTCGTGTCGGCCGGCGGCCTGCTGCGACTGACGGGGGCGCGCATCG GCGTCGCCGGCCATCCGGTCAGCGCGTGCGCGCGCGACGTCTCGATCATCAATCATGCCTGCGTGCATGGCGATCTCGTG GCGTGGCGCAGCGGCTGGTTCCACACATCCCGTTAA
Upstream 100 bases:
>100_bases CGCGCTCTGGGGGCTCGCGCTCGACGCCGCGTTTCGCCGCGAACTGAAATGGGACAAGACCGAGCGTTTTCGCCGGCAGT TGAAACCGGAGCGATGAGCG
Downstream 100 bases:
>100_bases GGAGCGCCTCATGTCCGATCGCCCCAGCCATCGCGACCCGCGCGTGCCGGTTGCCACTCTCGCGATGCTGTGCGGCGTCG CCTTCGGCGCGCCCGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTTFNVMVPVASVLALPFLPMLHELIRRSDVAALPIGDGPFVDQALLAARWHDALRAHVAGTPPADASAVPPWQTLGLAV QHADAIHVARDAHRDDVLYADRTITLDEGAQAAYAFADEHIDIHAGATIGTLAHAPLIDVDDAVLRGVVVGDTVRLRGAG GFACLYGEPLVFGAAPGPRPADAPAAPRRAISLTRHFASLPHRFVHGRYLLPCDVRLPAHTVVQGNLIVEGALVLGEGCV LRGSVKAHRVELERHALLHGAVFARDDVLLAHASCIDGVVSAGGLLRLTGARIGVAGHPVSACARDVSIINHACVHGDLV AWRSGWFHTSR
Sequences:
>Translated_331_residues MTTFNVMVPVASVLALPFLPMLHELIRRSDVAALPIGDGPFVDQALLAARWHDALRAHVAGTPPADASAVPPWQTLGLAV QHADAIHVARDAHRDDVLYADRTITLDEGAQAAYAFADEHIDIHAGATIGTLAHAPLIDVDDAVLRGVVVGDTVRLRGAG GFACLYGEPLVFGAAPGPRPADAPAAPRRAISLTRHFASLPHRFVHGRYLLPCDVRLPAHTVVQGNLIVEGALVLGEGCV LRGSVKAHRVELERHALLHGAVFARDDVLLAHASCIDGVVSAGGLLRLTGARIGVAGHPVSACARDVSIINHACVHGDLV AWRSGWFHTSR >Mature_330_residues TTFNVMVPVASVLALPFLPMLHELIRRSDVAALPIGDGPFVDQALLAARWHDALRAHVAGTPPADASAVPPWQTLGLAVQ HADAIHVARDAHRDDVLYADRTITLDEGAQAAYAFADEHIDIHAGATIGTLAHAPLIDVDDAVLRGVVVGDTVRLRGAGG FACLYGEPLVFGAAPGPRPADAPAAPRRAISLTRHFASLPHRFVHGRYLLPCDVRLPAHTVVQGNLIVEGALVLGEGCVL RGSVKAHRVELERHALLHGAVFARDDVLLAHASCIDGVVSAGGLLRLTGARIGVAGHPVSACARDVSIINHACVHGDLVA WRSGWFHTSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34938; Mature: 34807
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFNVMVPVASVLALPFLPMLHELIRRSDVAALPIGDGPFVDQALLAARWHDALRAHVA CCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC GTPPADASAVPPWQTLGLAVQHADAIHVARDAHRDDVLYADRTITLDEGAQAAYAFADEH CCCCCCCCCCCCHHHHHEEHHCCCHHHHHHHCCCCCEEEECEEEEECCCCCEEEEECCCC IDIHAGATIGTLAHAPLIDVDDAVLRGVVVGDTVRLRGAGGFACLYGEPLVFGAAPGPRP EEEECCCCHHHHCCCCCCCCCHHHHCCEEECCEEEEECCCCEEEEECCCEEEECCCCCCC ADAPAAPRRAISLTRHFASLPHRFVHGRYLLPCDVRLPAHTVVQGNLIVEGALVLGEGCV CCCCCCCHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCEEEECCEEEEEEEEECCCEE LRGSVKAHRVELERHALLHGAVFARDDVLLAHASCIDGVVSAGGLLRLTGARIGVAGHPV EECCCHHHHHHHHHHHHHHHHHEECCCEEEEHHHHHHHHHCCCCEEEEECCEEEECCCCH SACARDVSIINHACVHGDLVAWRSGWFHTSR HHHHHHHHHHHHHHHCCCEEEECCCCEECCC >Mature Secondary Structure TTFNVMVPVASVLALPFLPMLHELIRRSDVAALPIGDGPFVDQALLAARWHDALRAHVA CEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC GTPPADASAVPPWQTLGLAVQHADAIHVARDAHRDDVLYADRTITLDEGAQAAYAFADEH CCCCCCCCCCCCHHHHHEEHHCCCHHHHHHHCCCCCEEEECEEEEECCCCCEEEEECCCC IDIHAGATIGTLAHAPLIDVDDAVLRGVVVGDTVRLRGAGGFACLYGEPLVFGAAPGPRP EEEECCCCHHHHCCCCCCCCCHHHHCCEEECCEEEEECCCCEEEEECCCEEEECCCCCCC ADAPAAPRRAISLTRHFASLPHRFVHGRYLLPCDVRLPAHTVVQGNLIVEGALVLGEGCV CCCCCCCHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCEEEECCEEEEEEEEECCCEE LRGSVKAHRVELERHALLHGAVFARDDVLLAHASCIDGVVSAGGLLRLTGARIGVAGHPV EECCCHHHHHHHHHHHHHHHHHEECCCEEEEHHHHHHHHHCCCCEEEEECCEEEECCCCH SACARDVSIINHACVHGDLVAWRSGWFHTSR HHHHHHHHHHHHHHHCCCEEEECCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA