Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689352

Identifier: 116689352

GI number: 116689352

Start: 1466008

End: 1466778

Strand: Reverse

Name: 116689352

Synonym: Bcen2424_1330

Alternate gene names: NA

Gene position: 1466778-1466008 (Counterclockwise)

Preceding gene: 116689353

Following gene: 116689351

Centisome position: 42.1

GC content: 66.15

Gene sequence:

>771_bases
ATGCACACGCATCCCGTCCGTCCTCCCGTCGATCGTTCGCTGCGCACCCACGCGTACCCGCAGCGCTGGCTGTCGTCGAT
CGCGCTGCTGACGCCCGCGCTGTACGCGTCGCTGTGGTTCGGCTTGCCGCTGGCGTGGCGCTACTGGCGCTCGGTCATGG
CGTGGGGCGCGCACCAGCTCGATCCGGCGCTTCACGTGATCGTGATCGGTTACCCGCCCGACGCACCGCGCGTGCCGCTG
CTGTCGATCGACGTCGCGGCCCGCATGCCGGGCGGCATGCTGCTGGCCGCCACCACCGCGCTCTGCGCGACCGGCTTCGC
CGCATCGTTCATCCGGCGGGCGAACTGGTTGCCTGTTGCATATCTGTTACGTATCGCGAGCTTCACCCAGCTGCTGATCT
GCGCATACTTCTGGCTTGCGCCCGGCACGTTTCCGTATGTCCCGCAATTGCACCTGCGCGACATGTTCGTGCTGTACGGC
GCGGCGATCGCAGTGATCCCGCTGGTGATGGCCGCGCTGTACTACCCGCTCGATTTCTCGCTGCTGCAAAAAGCCGTCGC
GTCGCTGCTGGTGCTCGGCTACTTCGTGTTCGCGCTGCCGTTCGTGATGCTGCTGCACGCGACGATCATCCATCACGGCT
CGCTGCTGTTCCTGCCGTTCTGCTATTTCCTGCTCGGCGGGCCACTGCTGATCGGCCTGCTGGTCACGCTCTATACCTAC
TGCGCAAGCTGGCCCGGCGCACTGACGCGCGATCGCGATTCCGTCTGCTGA

Upstream 100 bases:

>100_bases
TGGGGAACGCAGCTCGAATTCGACTATTACCACAACCCGTACTACTCACGAATCGGCGGCGAGCTCAGCGTCTTCTATCG
CTGGTAACCGGGCGGGCGCC

Downstream 100 bases:

>100_bases
TAGCGCGTTCAAACGCGCCGTATCAGCGATGAAACGAATCCGCCGCGTTTCCGGCCCTGCCGCCCGGCCCGCATCGCAGG
AAGCCAGCAGGACCGGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MHTHPVRPPVDRSLRTHAYPQRWLSSIALLTPALYASLWFGLPLAWRYWRSVMAWGAHQLDPALHVIVIGYPPDAPRVPL
LSIDVAARMPGGMLLAATTALCATGFAASFIRRANWLPVAYLLRIASFTQLLICAYFWLAPGTFPYVPQLHLRDMFVLYG
AAIAVIPLVMAALYYPLDFSLLQKAVASLLVLGYFVFALPFVMLLHATIIHHGSLLFLPFCYFLLGGPLLIGLLVTLYTY
CASWPGALTRDRDSVC

Sequences:

>Translated_256_residues
MHTHPVRPPVDRSLRTHAYPQRWLSSIALLTPALYASLWFGLPLAWRYWRSVMAWGAHQLDPALHVIVIGYPPDAPRVPL
LSIDVAARMPGGMLLAATTALCATGFAASFIRRANWLPVAYLLRIASFTQLLICAYFWLAPGTFPYVPQLHLRDMFVLYG
AAIAVIPLVMAALYYPLDFSLLQKAVASLLVLGYFVFALPFVMLLHATIIHHGSLLFLPFCYFLLGGPLLIGLLVTLYTY
CASWPGALTRDRDSVC
>Mature_256_residues
MHTHPVRPPVDRSLRTHAYPQRWLSSIALLTPALYASLWFGLPLAWRYWRSVMAWGAHQLDPALHVIVIGYPPDAPRVPL
LSIDVAARMPGGMLLAATTALCATGFAASFIRRANWLPVAYLLRIASFTQLLICAYFWLAPGTFPYVPQLHLRDMFVLYG
AAIAVIPLVMAALYYPLDFSLLQKAVASLLVLGYFVFALPFVMLLHATIIHHGSLLFLPFCYFLLGGPLLIGLLVTLYTY
CASWPGALTRDRDSVC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28485; Mature: 28485

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTHPVRPPVDRSLRTHAYPQRWLSSIALLTPALYASLWFGLPLAWRYWRSVMAWGAHQL
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHC
DPALHVIVIGYPPDAPRVPLLSIDVAARMPGGMLLAATTALCATGFAASFIRRANWLPVA
CCCEEEEEEECCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
YLLRIASFTQLLICAYFWLAPGTFPYVPQLHLRDMFVLYGAAIAVIPLVMAALYYPLDFS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LLQKAVASLLVLGYFVFALPFVMLLHATIIHHGSLLFLPFCYFLLGGPLLIGLLVTLYTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CASWPGALTRDRDSVC
HHCCCCCCCCCCCCCC
>Mature Secondary Structure
MHTHPVRPPVDRSLRTHAYPQRWLSSIALLTPALYASLWFGLPLAWRYWRSVMAWGAHQL
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHC
DPALHVIVIGYPPDAPRVPLLSIDVAARMPGGMLLAATTALCATGFAASFIRRANWLPVA
CCCEEEEEEECCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
YLLRIASFTQLLICAYFWLAPGTFPYVPQLHLRDMFVLYGAAIAVIPLVMAALYYPLDFS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LLQKAVASLLVLGYFVFALPFVMLLHATIIHHGSLLFLPFCYFLLGGPLLIGLLVTLYTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CASWPGALTRDRDSVC
HHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA