Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689352
Identifier: 116689352
GI number: 116689352
Start: 1466008
End: 1466778
Strand: Reverse
Name: 116689352
Synonym: Bcen2424_1330
Alternate gene names: NA
Gene position: 1466778-1466008 (Counterclockwise)
Preceding gene: 116689353
Following gene: 116689351
Centisome position: 42.1
GC content: 66.15
Gene sequence:
>771_bases ATGCACACGCATCCCGTCCGTCCTCCCGTCGATCGTTCGCTGCGCACCCACGCGTACCCGCAGCGCTGGCTGTCGTCGAT CGCGCTGCTGACGCCCGCGCTGTACGCGTCGCTGTGGTTCGGCTTGCCGCTGGCGTGGCGCTACTGGCGCTCGGTCATGG CGTGGGGCGCGCACCAGCTCGATCCGGCGCTTCACGTGATCGTGATCGGTTACCCGCCCGACGCACCGCGCGTGCCGCTG CTGTCGATCGACGTCGCGGCCCGCATGCCGGGCGGCATGCTGCTGGCCGCCACCACCGCGCTCTGCGCGACCGGCTTCGC CGCATCGTTCATCCGGCGGGCGAACTGGTTGCCTGTTGCATATCTGTTACGTATCGCGAGCTTCACCCAGCTGCTGATCT GCGCATACTTCTGGCTTGCGCCCGGCACGTTTCCGTATGTCCCGCAATTGCACCTGCGCGACATGTTCGTGCTGTACGGC GCGGCGATCGCAGTGATCCCGCTGGTGATGGCCGCGCTGTACTACCCGCTCGATTTCTCGCTGCTGCAAAAAGCCGTCGC GTCGCTGCTGGTGCTCGGCTACTTCGTGTTCGCGCTGCCGTTCGTGATGCTGCTGCACGCGACGATCATCCATCACGGCT CGCTGCTGTTCCTGCCGTTCTGCTATTTCCTGCTCGGCGGGCCACTGCTGATCGGCCTGCTGGTCACGCTCTATACCTAC TGCGCAAGCTGGCCCGGCGCACTGACGCGCGATCGCGATTCCGTCTGCTGA
Upstream 100 bases:
>100_bases TGGGGAACGCAGCTCGAATTCGACTATTACCACAACCCGTACTACTCACGAATCGGCGGCGAGCTCAGCGTCTTCTATCG CTGGTAACCGGGCGGGCGCC
Downstream 100 bases:
>100_bases TAGCGCGTTCAAACGCGCCGTATCAGCGATGAAACGAATCCGCCGCGTTTCCGGCCCTGCCGCCCGGCCCGCATCGCAGG AAGCCAGCAGGACCGGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MHTHPVRPPVDRSLRTHAYPQRWLSSIALLTPALYASLWFGLPLAWRYWRSVMAWGAHQLDPALHVIVIGYPPDAPRVPL LSIDVAARMPGGMLLAATTALCATGFAASFIRRANWLPVAYLLRIASFTQLLICAYFWLAPGTFPYVPQLHLRDMFVLYG AAIAVIPLVMAALYYPLDFSLLQKAVASLLVLGYFVFALPFVMLLHATIIHHGSLLFLPFCYFLLGGPLLIGLLVTLYTY CASWPGALTRDRDSVC
Sequences:
>Translated_256_residues MHTHPVRPPVDRSLRTHAYPQRWLSSIALLTPALYASLWFGLPLAWRYWRSVMAWGAHQLDPALHVIVIGYPPDAPRVPL LSIDVAARMPGGMLLAATTALCATGFAASFIRRANWLPVAYLLRIASFTQLLICAYFWLAPGTFPYVPQLHLRDMFVLYG AAIAVIPLVMAALYYPLDFSLLQKAVASLLVLGYFVFALPFVMLLHATIIHHGSLLFLPFCYFLLGGPLLIGLLVTLYTY CASWPGALTRDRDSVC >Mature_256_residues MHTHPVRPPVDRSLRTHAYPQRWLSSIALLTPALYASLWFGLPLAWRYWRSVMAWGAHQLDPALHVIVIGYPPDAPRVPL LSIDVAARMPGGMLLAATTALCATGFAASFIRRANWLPVAYLLRIASFTQLLICAYFWLAPGTFPYVPQLHLRDMFVLYG AAIAVIPLVMAALYYPLDFSLLQKAVASLLVLGYFVFALPFVMLLHATIIHHGSLLFLPFCYFLLGGPLLIGLLVTLYTY CASWPGALTRDRDSVC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28485; Mature: 28485
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTHPVRPPVDRSLRTHAYPQRWLSSIALLTPALYASLWFGLPLAWRYWRSVMAWGAHQL CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHC DPALHVIVIGYPPDAPRVPLLSIDVAARMPGGMLLAATTALCATGFAASFIRRANWLPVA CCCEEEEEEECCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH YLLRIASFTQLLICAYFWLAPGTFPYVPQLHLRDMFVLYGAAIAVIPLVMAALYYPLDFS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LLQKAVASLLVLGYFVFALPFVMLLHATIIHHGSLLFLPFCYFLLGGPLLIGLLVTLYTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CASWPGALTRDRDSVC HHCCCCCCCCCCCCCC >Mature Secondary Structure MHTHPVRPPVDRSLRTHAYPQRWLSSIALLTPALYASLWFGLPLAWRYWRSVMAWGAHQL CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHC DPALHVIVIGYPPDAPRVPLLSIDVAARMPGGMLLAATTALCATGFAASFIRRANWLPVA CCCEEEEEEECCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH YLLRIASFTQLLICAYFWLAPGTFPYVPQLHLRDMFVLYGAAIAVIPLVMAALYYPLDFS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LLQKAVASLLVLGYFVFALPFVMLLHATIIHHGSLLFLPFCYFLLGGPLLIGLLVTLYTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CASWPGALTRDRDSVC HHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA