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The map label for this gene is yafS [H]

Identifier: 116689308

GI number: 116689308

Start: 1413669

End: 1414481

Strand: Reverse

Name: yafS [H]

Synonym: Bcen2424_1286

Alternate gene names: 116689308

Gene position: 1414481-1413669 (Counterclockwise)

Preceding gene: 116689317

Following gene: 116689307

Centisome position: 40.6

GC content: 69.0

Gene sequence:

>813_bases
ATGTCTGACCGTCAAATTATAGACTGGCCCGCCTGGACCGACTCGCCGCCCGGCCGTTACGTGCTGGGCTGGGAGCAGGC
GCAGCTCGACCGGATCGTATCCGACGTCTTCGGCTTCCACGCGCTGCAGCTCGGCCTGCCGCAGCTCGACGCACTGCGCG
AGAACCGCATGCCGTATCGCGGCCTCGTGCTCGACCCGGCGAGCGGCGCGAGCGCGCCGTATCAGTATCCGTGGGCGCGC
GAAGCACACACGGCGGCCCACGCGCCCGCCGATCGCAGCACGACGTGGTGCGACCTGCTCGACCTGCCGTTCGAGTCGCA
GAGCGTCGATCTGATCGTGATGCCGCACACGCTCGAATTCACGTCCGACCCGCACCGCCTGCTGCGCGAGGCCGAGCGCG
TGCTGATGCCGGAAGGCCAGCTCGTGATCACCGGCTTCAACTCGCTGAGCCTGTGGGGCATGCGGCAGTCGTTCGGGCGC
ATGGCGAACCGCCCGTTCGTGCCGGCCACGCGCGACCAGATCGCGTTCATCCGGCTCAAGGACTGGATCAAGCTGCTCGG
TTTCGACCTCGAACGCGGCCGCTTCGGCTGCTACCGGCCGCCGCTCGCCACCGACCAGTGGCTGGCCCGCTACGGCTTCA
TGGAGGCCGCCGGCGACCGCTGGTGGCCGATCTTCGGCGCCGTCTACATGGTGACGGCCGTCAAGCGCGTGCGCGGCATG
CGCCTCGTCGGCCCGATCAAGATGAAGAAGCCCGTGCTCGCACCGGGCCTGACGCCGGCGGCCTCCCCGACCACTCACCA
AGAACGTTCATGA

Upstream 100 bases:

>100_bases
CGATCGCATCGCGGCCGTCCGAGACGAGCCAGATATAGTTGTCTTCGAATGCCGGAACCGGCACGTATTCCAGCTCGTTC
ATAGGCGCGCAATCATCGTT

Downstream 100 bases:

>100_bases
CAACCGACACCATCGACATCTATACCGACGGCGCCTGCAAGGGCAACCCCGGCCCCGGCGGCTGGGGCGCCCTACTGCGC
TACGGCAGTCAAGAAAAGGA

Product: methyltransferase type 11

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSDRQIIDWPAWTDSPPGRYVLGWEQAQLDRIVSDVFGFHALQLGLPQLDALRENRMPYRGLVLDPASGASAPYQYPWAR
EAHTAAHAPADRSTTWCDLLDLPFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLVITGFNSLSLWGMRQSFGR
MANRPFVPATRDQIAFIRLKDWIKLLGFDLERGRFGCYRPPLATDQWLARYGFMEAAGDRWWPIFGAVYMVTAVKRVRGM
RLVGPIKMKKPVLAPGLTPAASPTTHQERS

Sequences:

>Translated_270_residues
MSDRQIIDWPAWTDSPPGRYVLGWEQAQLDRIVSDVFGFHALQLGLPQLDALRENRMPYRGLVLDPASGASAPYQYPWAR
EAHTAAHAPADRSTTWCDLLDLPFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLVITGFNSLSLWGMRQSFGR
MANRPFVPATRDQIAFIRLKDWIKLLGFDLERGRFGCYRPPLATDQWLARYGFMEAAGDRWWPIFGAVYMVTAVKRVRGM
RLVGPIKMKKPVLAPGLTPAASPTTHQERS
>Mature_269_residues
SDRQIIDWPAWTDSPPGRYVLGWEQAQLDRIVSDVFGFHALQLGLPQLDALRENRMPYRGLVLDPASGASAPYQYPWARE
AHTAAHAPADRSTTWCDLLDLPFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLVITGFNSLSLWGMRQSFGRM
ANRPFVPATRDQIAFIRLKDWIKLLGFDLERGRFGCYRPPLATDQWLARYGFMEAAGDRWWPIFGAVYMVTAVKRVRGMR
LVGPIKMKKPVLAPGLTPAASPTTHQERS

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=242, Percent_Identity=29.3388429752066, Blast_Score=84, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 30660; Mature: 30528

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRQIIDWPAWTDSPPGRYVLGWEQAQLDRIVSDVFGFHALQLGLPQLDALRENRMPYR
CCCCEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
GLVLDPASGASAPYQYPWAREAHTAAHAPADRSTTWCDLLDLPFESQSVDLIVMPHTLEF
CEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEHHCCCCCCCCCEEEEEECCEECC
TSDPHRLLREAERVLMPEGQLVITGFNSLSLWGMRQSFGRMANRPFVPATRDQIAFIRLK
CCCHHHHHHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEHHH
DWIKLLGFDLERGRFGCYRPPLATDQWLARYGFMEAAGDRWWPIFGAVYMVTAVKRVRGM
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
RLVGPIKMKKPVLAPGLTPAASPTTHQERS
EEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDRQIIDWPAWTDSPPGRYVLGWEQAQLDRIVSDVFGFHALQLGLPQLDALRENRMPYR
CCCEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
GLVLDPASGASAPYQYPWAREAHTAAHAPADRSTTWCDLLDLPFESQSVDLIVMPHTLEF
CEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEHHCCCCCCCCCEEEEEECCEECC
TSDPHRLLREAERVLMPEGQLVITGFNSLSLWGMRQSFGRMANRPFVPATRDQIAFIRLK
CCCHHHHHHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEHHH
DWIKLLGFDLERGRFGCYRPPLATDQWLARYGFMEAAGDRWWPIFGAVYMVTAVKRVRGM
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
RLVGPIKMKKPVLAPGLTPAASPTTHQERS
EEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]