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The map label for this gene is yhbY [H]

Identifier: 116689317

GI number: 116689317

Start: 1425066

End: 1425590

Strand: Reverse

Name: yhbY [H]

Synonym: Bcen2424_1295

Alternate gene names: 116689317

Gene position: 1425590-1425066 (Counterclockwise)

Preceding gene: 116689329

Following gene: 116689308

Centisome position: 40.92

GC content: 68.38

Gene sequence:

>525_bases
ATGCCCGCCCTTTCGCTTTCTCCCGCCGAGCGCTCCGCGCTGCGCTCCCAGGCCCATGCGCTCAAGCCCGTCGTGCTGAT
CGGCGCCGAAGGGCTGACCGACGCCGTGCTGAAGGAAATCAAGGTGCACCTCGACGCACACCAGCTGATCAAGATCCGCG
TGTTCGGCGACGAGCGCGACGATCGCATCGCGATCTACGACGATATCTGCGACCGCTTGAACGCGGCCCCGATTCAGCAT
ATCGGCAAGCTGCTGGTGATCTGGAGGCCCGAAGCCGCAGCGGCCCCGGCCCGCGGCCGTCGTGCCGGTGCGCTGCCCAG
CGCGGCAGAAGCCGCCGACGACAAGAAAGGCCGCGCTCCGCGCACCGTCAAGGTCGTCAAGGTGTCGCCGAACGCGAGCC
CCGTGCGCCGTCCGAGGCCGGTGAAGGTCACGGTGCGCGGCAACGAACGCGTGACGGCAGGCGGCACCGTGAAGCGCGCG
AAAAAGCGCCAGGCCAGCACCAAGCGGCCGTTCCAGGACAAGTAA

Upstream 100 bases:

>100_bases
CCAAGCCGCGATTTTACGTGGTTTCGGCGCACGGCTGACGCGGGAACGTCCCGCGATCGCTTTTCAGTCAGCGCGCCCTT
ATTTAGATTTCGACATTTCC

Downstream 100 bases:

>100_bases
CCCGCCGGTGCGGCACGGATTCCCGTGCCGCCCTGCCCCATCGTTGCGCAACGCGCAACGACGAGCGCTCAGGCGTCGCG
CGCCGGTAGACGCCAGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MPALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLKEIKVHLDAHQLIKIRVFGDERDDRIAIYDDICDRLNAAPIQH
IGKLLVIWRPEAAAAPARGRRAGALPSAAEAADDKKGRAPRTVKVVKVSPNASPVRRPRPVKVTVRGNERVTAGGTVKRA
KKRQASTKRPFQDK

Sequences:

>Translated_174_residues
MPALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLKEIKVHLDAHQLIKIRVFGDERDDRIAIYDDICDRLNAAPIQH
IGKLLVIWRPEAAAAPARGRRAGALPSAAEAADDKKGRAPRTVKVVKVSPNASPVRRPRPVKVTVRGNERVTAGGTVKRA
KKRQASTKRPFQDK
>Mature_173_residues
PALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLKEIKVHLDAHQLIKIRVFGDERDDRIAIYDDICDRLNAAPIQHI
GKLLVIWRPEAAAAPARGRRAGALPSAAEAADDKKGRAPRTVKVVKVSPNASPVRRPRPVKVTVRGNERVTAGGTVKRAK
KRQASTKRPFQDK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=87, Percent_Identity=41.3793103448276, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 18888; Mature: 18757

Theoretical pI: Translated: 11.47; Mature: 11.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLKEIKVHLDAHQLIKIRVFGDERD
CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEEECCCCC
DRIAIYDDICDRLNAAPIQHIGKLLVIWRPEAAAAPARGRRAGALPSAAEAADDKKGRAP
CEEEEHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
RTVKVVKVSPNASPVRRPRPVKVTVRGNERVTAGGTVKRAKKRQASTKRPFQDK
CEEEEEEECCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLKEIKVHLDAHQLIKIRVFGDERD
CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEEECCCCC
DRIAIYDDICDRLNAAPIQHIGKLLVIWRPEAAAAPARGRRAGALPSAAEAADDKKGRAP
CEEEEHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
RTVKVVKVSPNASPVRRPRPVKVTVRGNERVTAGGTVKRAKKRQASTKRPFQDK
CEEEEEEECCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]