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The map label for this gene is (hspc4-1 [H]

Identifier: 116689285

GI number: 116689285

Start: 1395436

End: 1395876

Strand: Reverse

Name: (hspc4-1 [H]

Synonym: Bcen2424_1263

Alternate gene names: 116689285

Gene position: 1395876-1395436 (Counterclockwise)

Preceding gene: 116689287

Following gene: 116689284

Centisome position: 40.07

GC content: 68.25

Gene sequence:

>441_bases
ATGAGCGGTATCCATTTCGGCAACGATCTGTTCGACGAATTCGCCCGCGTGCAGCGGCAGATGGCGAGCCTGCTCGGCGA
ACGCCCGTCGGGCATCCGTGCGGGGCGCGCCGGCGCGTTTCCCGCCCTCAACGTCGGCGCCACCGACGACGCGATCGAGA
TCGTCGCGTTCGCACCCGGCATGGCCGCGGCCGACTTCGACGTATCGATCGACAAGGATCTGCTGACGATCAGCGGCGAG
CGCAAACCGGCGCCGCGCACCGAAGGCGACGACGTGCGCACCTATGCACAGGAGCGCTTTCACGGCGCGTTCCGCCGCGT
GGTCGAACTGCCGCGCGATGCGGACCCCGACCAGGTCAGCGCCCGCTACGAAAACGGCTGCCTGCTGATTCGCGTCGGCC
GGCGCGAGGCCTCGAAGCCGCGTGCGATCACCATTCAGTAA

Upstream 100 bases:

>100_bases
CACGCACCGCCCCCGTATCGACCCAGTGGAGCCACCCGTCGCGCCCGCCGCAGGCGACGCGCGGTCACGTCTCCCGCGTT
CCCTGTTCAGGAGGACCAAC

Downstream 100 bases:

>100_bases
CCTTCAGGATACCGACATGAACACGAACCCGACCCTGGCCGAACGCCAAACCAACCCCGTTCACCCGGCCGCCGCGGAAG
CCGCGCGCCGGCCCGCGATC

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSGIHFGNDLFDEFARVQRQMASLLGERPSGIRAGRAGAFPALNVGATDDAIEIVAFAPGMAAADFDVSIDKDLLTISGE
RKPAPRTEGDDVRTYAQERFHGAFRRVVELPRDADPDQVSARYENGCLLIRVGRREASKPRAITIQ

Sequences:

>Translated_146_residues
MSGIHFGNDLFDEFARVQRQMASLLGERPSGIRAGRAGAFPALNVGATDDAIEIVAFAPGMAAADFDVSIDKDLLTISGE
RKPAPRTEGDDVRTYAQERFHGAFRRVVELPRDADPDQVSARYENGCLLIRVGRREASKPRAITIQ
>Mature_145_residues
SGIHFGNDLFDEFARVQRQMASLLGERPSGIRAGRAGAFPALNVGATDDAIEIVAFAPGMAAADFDVSIDKDLLTISGER
KPAPRTEGDDVRTYAQERFHGAFRRVVELPRDADPDQVSARYENGCLLIRVGRREASKPRAITIQ

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 15958; Mature: 15827

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIHFGNDLFDEFARVQRQMASLLGERPSGIRAGRAGAFPALNVGATDDAIEIVAFAPG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
MAAADFDVSIDKDLLTISGERKPAPRTEGDDVRTYAQERFHGAFRRVVELPRDADPDQVS
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ARYENGCLLIRVGRREASKPRAITIQ
HEECCCEEEEEECCCCCCCCCEEEEC
>Mature Secondary Structure 
SGIHFGNDLFDEFARVQRQMASLLGERPSGIRAGRAGAFPALNVGATDDAIEIVAFAPG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
MAAADFDVSIDKDLLTISGERKPAPRTEGDDVRTYAQERFHGAFRRVVELPRDADPDQVS
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ARYENGCLLIRVGRREASKPRAITIQ
HEECCCEEEEEECCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA