Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689287
Identifier: 116689287
GI number: 116689287
Start: 1397086
End: 1397367
Strand: Reverse
Name: 116689287
Synonym: Bcen2424_1265
Alternate gene names: NA
Gene position: 1397367-1397086 (Counterclockwise)
Preceding gene: 116689288
Following gene: 116689285
Centisome position: 40.11
GC content: 69.5
Gene sequence:
>282_bases ATGAAAAACGTCCTGCGATTCGCCGTCGCGACCGCCGCAGCCGCGCTACTGTCCCCCACCTTTGCCCAGACCGACGCATC GCCCTCCGCGCAGGGGCTGACGCGCGCGGAAGTCATCGACCAGCTCAAGCAGGCCTATCTCGACGGCGAACTGCCGACCA ACGACGGCAACTATCCGCCGAACGCCGCGACGCGTGCGCGCAACCGCGAACTCGTGCAGGCCGCGAGCCCGGCATGGCTG GCCCACGTGCCGCCCGCCAGCCAGGCGACGTCGCAGCAATGA
Upstream 100 bases:
>100_bases ATCGTCCGCGCAGCACCCGCTCGCGACAATGGGACCCATCCGAACGCACCGCGCATCGCCGCGCGCGTCCGGTACCCCGT CCCCTTGATCGGAGCCCGCC
Downstream 100 bases:
>100_bases CCGGTGGCGCCGCGGCGCGCGACCAGATCAGGATCAAGATCAAGATCAGGGCAGGAAGCTGCGGCGTCGCGCGTCGATCA GTTCGACGAGCAGCCGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MKNVLRFAVATAAAALLSPTFAQTDASPSAQGLTRAEVIDQLKQAYLDGELPTNDGNYPPNAATRARNRELVQAASPAWL AHVPPASQATSQQ
Sequences:
>Translated_93_residues MKNVLRFAVATAAAALLSPTFAQTDASPSAQGLTRAEVIDQLKQAYLDGELPTNDGNYPPNAATRARNRELVQAASPAWL AHVPPASQATSQQ >Mature_93_residues MKNVLRFAVATAAAALLSPTFAQTDASPSAQGLTRAEVIDQLKQAYLDGELPTNDGNYPPNAATRARNRELVQAASPAWL AHVPPASQATSQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9801; Mature: 9801
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVLRFAVATAAAALLSPTFAQTDASPSAQGLTRAEVIDQLKQAYLDGELPTNDGNYPP CCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC NAATRARNRELVQAASPAWLAHVPPASQATSQQ CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MKNVLRFAVATAAAALLSPTFAQTDASPSAQGLTRAEVIDQLKQAYLDGELPTNDGNYPP CCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC NAATRARNRELVQAASPAWLAHVPPASQATSQQ CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA