Click here to switch to the map view.

The map label for this gene is ydhP [H]

Identifier: 116689277

GI number: 116689277

Start: 1387276

End: 1388481

Strand: Reverse

Name: ydhP [H]

Synonym: Bcen2424_1255

Alternate gene names: 116689277

Gene position: 1388481-1387276 (Counterclockwise)

Preceding gene: 116689278

Following gene: 116689273

Centisome position: 39.85

GC content: 72.39

Gene sequence:

>1206_bases
GTGACCACCACGACTTCCTCTCCGTCCCGCCCCGGCGGCAGCGCCGCGCTGCCGCTGCTCGCGCTCGCCGCCGGCGCGTT
CGGCATCGGCACGACCGAGTTCTCGCCGATGGGCCTGCTGCCCGTGATCGCCGATGGCGTGCACGTGTCGATTCCGCAAG
CCGGCATGCTGATCAGCGCGTATGCGATCGGCGTGATGGTCGGCGCGCCGCTGATGACGCTGCTGCTCGCGCGCTGGTCG
CGCCGCTCCGCGCTGATCGCGCTGATGTCGATCTTCACCATCGGCAACCTGCTGTCGGCCGTCGCGCCGGACTACACGAC
GCTGCTGCTCGCCCGCCTCGTGACGAGCCTCAATCACGGCGCGTTCTTCGGGCTCGGCTCGGTGGTCGCGGCGAGCCTCG
TGCCGCGCGAAAAGCAGGCCAGCGCGGTCGCGACGATGTTCATGGGGCTGACGATCGCGAACGTCGGCGGCGTGCCGGCC
GCAACCTGGCTCGGCCAGATCATCGGCTGGCGCATGTCGTTCGCGGCGACCGCGGGCCTGGGCCTGATCGCGATCGCCGG
CCTGTTCGCCGCGCTGCCGAAGGGCGAAGCCGGCAAGATGCCCGACCTGCGCGCCGAGCTCTCCGTGCTGACGCGCCCGG
TCGTGCTCGGCGCGCTCGGGACGACAGTGCTCGGCGCCGGTGCGATGTTCACGCTCTATACGTACGTCGCGCCGACGCTC
GAACATCTGACGGGCGCGACGCCCGGCTTCGTGACCGCGATGCTGGTGCTGATCGGCGTCGGCTTCTCGATCGGCAACAT
CGCGGGCGGGCGCCTCGCCGACCGCTCGCTCGACGGCACGCTGATCGGCTTCCTGTTGCTGCTGATCGCGACGATGGCCG
CGTTCCCGCTGCTCGCCACCACCCATGCGGGCGCCGGCGTCACGCTGCTGGTCTGGGGGATCGCGACGTTCGCGGTCGTG
CCGCCGCTGCAGATGCGCGTGATGCGCGCGGCCCACGAAGCGCCGGGCCTCGCGTCGGCCGTGAACATCGGCGCGTTCAA
CCTCGGCAACGCGGTGGGCGCCGCCGCCGGTGGTGCGGCGATCTCGGCCGGGTTCGGCTACGCGGCGGTGCCGCTCGTCG
GCGCGCTGATCGCCGCCGCCGGGCTCGCACTCGTGATGCTGCAGGTCACGCAGCGCCGCCGCTCGCCGGCCGCCGCGAAC
TCGTAA

Upstream 100 bases:

>100_bases
TCGTCCGCATACGGCTTTTTCCGCAAAAGTAACGCAGGCACACTTCACGCTGTCCTCAACGGCCTCGTGCCGTCGTCCCC
CGCTTACAGGAGTCCACCAC

Downstream 100 bases:

>100_bases
AGGGTAACGCCCGGACGGCCGGGAACCTGCCGCACGCATTCTTACGGCCGCGCCATGCGGCCGTTGTCATTTCCGGCGTG
CGCTTCGGTTCCGAGTGCCC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MTTTTSSPSRPGGSAALPLLALAAGAFGIGTTEFSPMGLLPVIADGVHVSIPQAGMLISAYAIGVMVGAPLMTLLLARWS
RRSALIALMSIFTIGNLLSAVAPDYTTLLLARLVTSLNHGAFFGLGSVVAASLVPREKQASAVATMFMGLTIANVGGVPA
ATWLGQIIGWRMSFAATAGLGLIAIAGLFAALPKGEAGKMPDLRAELSVLTRPVVLGALGTTVLGAGAMFTLYTYVAPTL
EHLTGATPGFVTAMLVLIGVGFSIGNIAGGRLADRSLDGTLIGFLLLLIATMAAFPLLATTHAGAGVTLLVWGIATFAVV
PPLQMRVMRAAHEAPGLASAVNIGAFNLGNAVGAAAGGAAISAGFGYAAVPLVGALIAAAGLALVMLQVTQRRRSPAAAN
S

Sequences:

>Translated_401_residues
MTTTTSSPSRPGGSAALPLLALAAGAFGIGTTEFSPMGLLPVIADGVHVSIPQAGMLISAYAIGVMVGAPLMTLLLARWS
RRSALIALMSIFTIGNLLSAVAPDYTTLLLARLVTSLNHGAFFGLGSVVAASLVPREKQASAVATMFMGLTIANVGGVPA
ATWLGQIIGWRMSFAATAGLGLIAIAGLFAALPKGEAGKMPDLRAELSVLTRPVVLGALGTTVLGAGAMFTLYTYVAPTL
EHLTGATPGFVTAMLVLIGVGFSIGNIAGGRLADRSLDGTLIGFLLLLIATMAAFPLLATTHAGAGVTLLVWGIATFAVV
PPLQMRVMRAAHEAPGLASAVNIGAFNLGNAVGAAAGGAAISAGFGYAAVPLVGALIAAAGLALVMLQVTQRRRSPAAAN
S
>Mature_400_residues
TTTTSSPSRPGGSAALPLLALAAGAFGIGTTEFSPMGLLPVIADGVHVSIPQAGMLISAYAIGVMVGAPLMTLLLARWSR
RSALIALMSIFTIGNLLSAVAPDYTTLLLARLVTSLNHGAFFGLGSVVAASLVPREKQASAVATMFMGLTIANVGGVPAA
TWLGQIIGWRMSFAATAGLGLIAIAGLFAALPKGEAGKMPDLRAELSVLTRPVVLGALGTTVLGAGAMFTLYTYVAPTLE
HLTGATPGFVTAMLVLIGVGFSIGNIAGGRLADRSLDGTLIGFLLLLIATMAAFPLLATTHAGAGVTLLVWGIATFAVVP
PLQMRVMRAAHEAPGLASAVNIGAFNLGNAVGAAAGGAAISAGFGYAAVPLVGALIAAAGLALVMLQVTQRRRSPAAANS

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=384, Percent_Identity=72.3958333333333, Blast_Score=511, Evalue=1e-146,
Organism=Escherichia coli, GI1786595, Length=386, Percent_Identity=32.6424870466321, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1787808, Length=398, Percent_Identity=30.1507537688442, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI145693198, Length=358, Percent_Identity=25.9776536312849, Blast_Score=101, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40148; Mature: 40017

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTTTSSPSRPGGSAALPLLALAAGAFGIGTTEFSPMGLLPVIADGVHVSIPQAGMLISA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEECCCCHHHHHH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HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]