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The map label for this gene is yqjF [H]

Identifier: 116689261

GI number: 116689261

Start: 1369425

End: 1369853

Strand: Reverse

Name: yqjF [H]

Synonym: Bcen2424_1239

Alternate gene names: 116689261

Gene position: 1369853-1369425 (Counterclockwise)

Preceding gene: 116689262

Following gene: 116689260

Centisome position: 39.32

GC content: 63.17

Gene sequence:

>429_bases
ATGATCAATTCGATCAACCGCGCACTGTACAAAACAACCGTTCAAACGCCCGTCGTCAACCTCGTGCTGTCCGTCCTCGT
GCGACTCCTCATCGCCGGCGTGTATCTCGGCGCCGGGATCAGCAAGATCTTCAACTATGCGGGCACCCAGCAGTACATGG
AACACATGGGCGTGTCGGGCGCGCTGCTTCCGCTCGTGATCGTCGTCGAAATCGCCGGCGGCCTGGCCTTGATCACCGGC
TTCATGACGCGGCTCGCCGCGCTCGGGCTCGCGATCTTCTCGATCATCGCCGCAGTGATCTTCCACGGCGGCGGCGACCA
GACCCAGCAGACGTTCTTCATGATGAACCTGTCGATGGCAGGCGGCCTGCTCGCGCTGTTCCTGCATGGCGCCGGCCCTC
TCGCGTTCGACCGCGCACAGCCGGACTGA

Upstream 100 bases:

>100_bases
CGACTATCCGACGCTCGACGCGTAAGCATCAATCGCCCGACAACAGGTCGGTCGCTCGACCGGATCGACGATCCACCCAC
TCATTCATTATGGATTCCAT

Downstream 100 bases:

>100_bases
CCCGTCGGCTTTCGGCGACACACAACTGCGCGGCCGATCCGGGTCCGCGCTTCATCCATCCCCGGGGGCGAACGCCCCCA
TTCCAAGCGAGATGTTTCCA

Product: DoxX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MINSINRALYKTTVQTPVVNLVLSVLVRLLIAGVYLGAGISKIFNYAGTQQYMEHMGVSGALLPLVIVVEIAGGLALITG
FMTRLAALGLAIFSIIAAVIFHGGGDQTQQTFFMMNLSMAGGLLALFLHGAGPLAFDRAQPD

Sequences:

>Translated_142_residues
MINSINRALYKTTVQTPVVNLVLSVLVRLLIAGVYLGAGISKIFNYAGTQQYMEHMGVSGALLPLVIVVEIAGGLALITG
FMTRLAALGLAIFSIIAAVIFHGGGDQTQQTFFMMNLSMAGGLLALFLHGAGPLAFDRAQPD
>Mature_142_residues
MINSINRALYKTTVQTPVVNLVLSVLVRLLIAGVYLGAGISKIFNYAGTQQYMEHMGVSGALLPLVIVVEIAGGLALITG
FMTRLAALGLAIFSIIAAVIFHGGGDQTQQTFFMMNLSMAGGLLALFLHGAGPLAFDRAQPD

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI87082210, Length=115, Percent_Identity=45.2173913043478, Blast_Score=95, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14952; Mature: 14952

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINSINRALYKTTVQTPVVNLVLSVLVRLLIAGVYLGAGISKIFNYAGTQQYMEHMGVSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
ALLPLVIVVEIAGGLALITGFMTRLAALGLAIFSIIAAVIFHGGGDQTQQTFFMMNLSMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GGLLALFLHGAGPLAFDRAQPD
HHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MINSINRALYKTTVQTPVVNLVLSVLVRLLIAGVYLGAGISKIFNYAGTQQYMEHMGVSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
ALLPLVIVVEIAGGLALITGFMTRLAALGLAIFSIIAAVIFHGGGDQTQQTFFMMNLSMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GGLLALFLHGAGPLAFDRAQPD
HHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]