Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is qor [H]
Identifier: 116689260
GI number: 116689260
Start: 1368321
End: 1369325
Strand: Reverse
Name: qor [H]
Synonym: Bcen2424_1238
Alternate gene names: 116689260
Gene position: 1369325-1368321 (Counterclockwise)
Preceding gene: 116689261
Following gene: 116689259
Centisome position: 39.3
GC content: 68.66
Gene sequence:
>1005_bases ATGACCAGCATGCATGCCATCCAGATCGAGCGGGTCGGCGATCCTTCTGTCCTTCGTCCCGTCGTGATCGAGCGCCCGAC CCCTGCCGCCGACGAGGTTCTCGTACGGGTCACGCGTATCGGACTGAATTTCGCGGAAACGCTGCAACGTGCCGGCACCT ATCCGGGCCCGGCGCTGACACTGCCCGCAGTGCCCGGCTCGGAAGTCGTCGGCACCGTCGCTGCCGTCGGCGCGAACGTG CGGGACATCCGGGTCGGCGCACGCGTCGCGGCGCCGCTGTTCGGCGCGATGCGCGCGACCGGCGGCTACGCCGAATACGT GACGCTCGGCGCCGCGCTGATTACCGCGATTCCCGACGAAGTCTCCGACGACGACGCGGTCGCCGTGATGTTGCAGGGGC TCGTGGCCCGTGTGCTGCTGCGCGAGACGCCCGTGGCCGCACGCACGGTCGCGATCACTGCCGCGGCCGGCGGCGTCGGC TCGATGCTGATCCAGCTGGCGCGACTCGACGGGGCACGCTCGATCACGGGCCTCGCAGGCGCGCCGGCCAAACTGCATGC GGTGCGAACGCTCGGCGCCGATCGGGCCATCAGCTATCGCGACGCGGACTGGGCCGATCAATTGAGCGACGCCACCAGCC GCGAGGGCCCTGACGTCGTATTCGATTCGATCGGCGGGACGGTCGCGCGCACGTTGGTGTCGGGTCTTGCGGTATACGGC CGGTTCGTCAGCTACGGCGCCGCGAGCGGTCAACTCCTGACGATCGACGAGGCGCTGATGAATGCGTTGATCTTCGGCAG CCGATCGGTGGCCGGCTTCGCGCTGCACGCGTTCCTCAACGAGCACGTCGTGCGCCGGACACTCGGCGAACTGTTCGGAC TGCTCGCGACCGGCAAGCTGAAGCCGCTGATCGGCGGCAGCTACGGGTTCGATGCGATTGCCGACGCACATCACGCGCTC GAAACCGGCCAGACGACCGGCAAGCTGATCCTGCGCGTCGAATGA
Upstream 100 bases:
>100_bases ACCCGTCGGCTTTCGGCGACACACAACTGCGCGGCCGATCCGGGTCCGCGCTTCATCCATCCCCGGGGGCGAACGCCCCC ATTCCAAGCGAGATGTTTCC
Downstream 100 bases:
>100_bases TCGTGATATACCGGCGCGTGACGGCACCGTCGTCGCGCGCCAGCGAGCTCGCCTGCCGTATGGCGATCACCCACTTTCGC GCGGACGACCCGGAGCACGA
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTSMHAIQIERVGDPSVLRPVVIERPTPAADEVLVRVTRIGLNFAETLQRAGTYPGPALTLPAVPGSEVVGTVAAVGANV RDIRVGARVAAPLFGAMRATGGYAEYVTLGAALITAIPDEVSDDDAVAVMLQGLVARVLLRETPVAARTVAITAAAGGVG SMLIQLARLDGARSITGLAGAPAKLHAVRTLGADRAISYRDADWADQLSDATSREGPDVVFDSIGGTVARTLVSGLAVYG RFVSYGAASGQLLTIDEALMNALIFGSRSVAGFALHAFLNEHVVRRTLGELFGLLATGKLKPLIGGSYGFDAIADAHHAL ETGQTTGKLILRVE
Sequences:
>Translated_334_residues MTSMHAIQIERVGDPSVLRPVVIERPTPAADEVLVRVTRIGLNFAETLQRAGTYPGPALTLPAVPGSEVVGTVAAVGANV RDIRVGARVAAPLFGAMRATGGYAEYVTLGAALITAIPDEVSDDDAVAVMLQGLVARVLLRETPVAARTVAITAAAGGVG SMLIQLARLDGARSITGLAGAPAKLHAVRTLGADRAISYRDADWADQLSDATSREGPDVVFDSIGGTVARTLVSGLAVYG RFVSYGAASGQLLTIDEALMNALIFGSRSVAGFALHAFLNEHVVRRTLGELFGLLATGKLKPLIGGSYGFDAIADAHHAL ETGQTTGKLILRVE >Mature_333_residues TSMHAIQIERVGDPSVLRPVVIERPTPAADEVLVRVTRIGLNFAETLQRAGTYPGPALTLPAVPGSEVVGTVAAVGANVR DIRVGARVAAPLFGAMRATGGYAEYVTLGAALITAIPDEVSDDDAVAVMLQGLVARVLLRETPVAARTVAITAAAGGVGS MLIQLARLDGARSITGLAGAPAKLHAVRTLGADRAISYRDADWADQLSDATSREGPDVVFDSIGGTVARTLVSGLAVYGR FVSYGAASGQLLTIDEALMNALIFGSRSVAGFALHAFLNEHVVRRTLGELFGLLATGKLKPLIGGSYGFDAIADAHHALE TGQTTGKLILRVE
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=332, Percent_Identity=29.8192771084337, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI13236495, Length=332, Percent_Identity=29.8192771084337, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI22538446, Length=340, Percent_Identity=29.7058823529412, Blast_Score=111, Evalue=7e-25, Organism=Homo sapiens, GI22538444, Length=340, Percent_Identity=29.7058823529412, Blast_Score=111, Evalue=7e-25, Organism=Homo sapiens, GI18379349, Length=316, Percent_Identity=28.4810126582279, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI24308257, Length=357, Percent_Identity=26.3305322128852, Blast_Score=101, Evalue=9e-22, Organism=Homo sapiens, GI194239676, Length=332, Percent_Identity=28.3132530120482, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI28557745, Length=350, Percent_Identity=27.7142857142857, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI226059159, Length=226, Percent_Identity=25.6637168141593, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI226059133, Length=226, Percent_Identity=25.6637168141593, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1790485, Length=330, Percent_Identity=31.5151515151515, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1787863, Length=358, Percent_Identity=25.6983240223464, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17507255, Length=340, Percent_Identity=27.6470588235294, Blast_Score=85, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6319520, Length=338, Percent_Identity=28.1065088757396, Blast_Score=101, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34569; Mature: 34438
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSMHAIQIERVGDPSVLRPVVIERPTPAADEVLVRVTRIGLNFAETLQRAGTYPGPALT CCCCEEEEEEECCCCHHHCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEE LPAVPGSEVVGTVAAVGANVRDIRVGARVAAPLFGAMRATGGYAEYVTLGAALITAIPDE ECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC VSDDDAVAVMLQGLVARVLLRETPVAARTVAITAAAGGVGSMLIQLARLDGARSITGLAG CCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC APAKLHAVRTLGADRAISYRDADWADQLSDATSREGPDVVFDSIGGTVARTLVSGLAVYG CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHH RFVSYGAASGQLLTIDEALMNALIFGSRSVAGFALHAFLNEHVVRRTLGELFGLLATGKL HHHHCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KPLIGGSYGFDAIADAHHALETGQTTGKLILRVE CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure TSMHAIQIERVGDPSVLRPVVIERPTPAADEVLVRVTRIGLNFAETLQRAGTYPGPALT CCCEEEEEEECCCCHHHCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEE LPAVPGSEVVGTVAAVGANVRDIRVGARVAAPLFGAMRATGGYAEYVTLGAALITAIPDE ECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC VSDDDAVAVMLQGLVARVLLRETPVAARTVAITAAAGGVGSMLIQLARLDGARSITGLAG CCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC APAKLHAVRTLGADRAISYRDADWADQLSDATSREGPDVVFDSIGGTVARTLVSGLAVYG CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHH RFVSYGAASGQLLTIDEALMNALIFGSRSVAGFALHAFLNEHVVRRTLGELFGLLATGKL HHHHCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KPLIGGSYGFDAIADAHHALETGQTTGKLILRVE CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]