| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is oar [H]
Identifier: 116622305
GI number: 116622305
Start: 4045809
End: 4048667
Strand: Reverse
Name: oar [H]
Synonym: Acid_3199
Alternate gene names: 116622305
Gene position: 4048667-4045809 (Counterclockwise)
Preceding gene: 116622306
Following gene: 116622294
Centisome position: 40.63
GC content: 61.18
Gene sequence:
>2859_bases ATGCGTAACATTTGGAAACTGACGGTAGTGCTGTTGTTCGGGCTTGCCCTAACCGGGAATATTTTCGGGCAGGCGTCGGC GATCAACGGGGAAATATCGGGGACCGTTACCGATGCGTCGGGCGCCGCGGTAGTGGGCGCAACCGTGCAGATCACGAATA GCGCCACCGGATTCCAACAGACCGGGAAGTCGGGCGACAACGGATTGTACCGGTTCACCGTGTTGCCGCTGGGCGTATAT GAGGTTCAGGTCTCGGCGACGGGCTTCGGTTCGATCCGGAGCACGGGTAATCCGCTGACCGCGGGCGCGGTAACCACGGT CAACGTAACACTGCCGGTGGCGGGCACCACCACGATGGTGGACGTGACCGCGACCGCCGCGATCACGGAACCCAGCCGCA CCGACGTGGGCAGCACCTTGAGCGAGAACATGACGCGCAACCTGCCGCTGGTTTCCCGCAATCCGTACAACTTCATTCTG TTCCAACCCAACGTGAGCGGACGTCCCAATACGGAATTCGGCGTACCGCGCAAGATCAACGCCAACGGCTTCAACGGGCG CATCAATTATCAGATCGACGGCAGTAACAACACGGAGAGCGACCGCGCCGGCATCCGTCTGATCCCGATCTCCGATAATT ACGTGGCCGAGGTGCAGCAGGTATCGAACGGCTTCGCGCCCGAATTCGGCAACACGGTGGGCACGGTGTTCAACACCGTC ACCAAGAGCGGGACCAACGAATTCCACGGAGAAGGCTCTTACCTGTTCCGCCGCACGGATTTCAGCGCCAAGCCCAAGCT GCTCTCGAGCACGGCACTGGTGCCGGAAGTCAACGTGGATTCCTACTCGGTGGATGGCGGCGGCCACATCATCAAGGACA AACTGTTCTTCTTCGGCGGCTTCGAGCATGTGAAGCGCGACCTGCCGGGCGTGGTGACCGTGAGTGCGGCCAATATTGCG GCGCTGGGACTGCCGGCCAGCTATGGCGACCCGATTCCCTTTCGCCAGAGCGTCTACTTCTACATGGGCAAGGGCGATTG GCAGATCAACGCCAAAAATCGCCTCTCGGTGCGCTACATGCACCATGCCAACGATTCGCCATATAACAACGGCACCATCG GCGGGCTCAACCTGGTCTCGCAATCGTATAACTTCGTGGACCGCTCGCACGTGGGCGCGGTGCAACTGGTATCGGTATTC AACGACCACATCGTCAACGAGCTTCGCTTTCAAACGGCGTACCGCGGACAGAACAACACGACCTTTTCGGCCTCCGGCAC GGGACCGGTGCTGACCGTCACGGGCATCGCCAACTTCGGCGGGCCGAACTCGGCGGGTTTCGTCTACGAAGAGACCACGC CGGAGGTGGCGGACAATTTCAGCTATGTGCGCGGAACGCATTCATTCAAGTTCGGCGTGAGCACGCACGCCATACGCGAC CGGCAAGTGCAGGCGACTTTCGCGCAGTACAACTTCGCGACCATCGCGGCATATCTTGCGGCAGTCAACGGGAGCGCTCC GAAGGGGTATTCGAGCTTCAGCCAGGTCGTGGGCAACCCCTCGCTGAATTACAACTCGGTGTTCACGAACTTTTTCGCGC AGGATTCCTGGAAGCCGATGCGCAATCTGACCGTGACTTACGGCCTCCGCTACGACCTGTACCAGATGCCTTCGGCGGAC AAAACCTCGCCCTTCCCCTTCTCGCAGAGCTTCAAGACCGACAAGAACAATTTCGGACCGCGGCTGGGTGTCGCATATGG CCTCGGCAAGGACCAGAAGACGGTGATTCGCGCCAGTTCCGGCATCTTCTATGATTCGCCACAGACCGACCAGTACCGGC GCGCGATTTCGCTGAACGGCAATCCGGCTTTCTTCACGCTCTCGGCAACGCCGGCGACAAGTTACGCGCCCTCGTTCCCG AACGTGTTCACGGCAGTCCCGGCGGGAGTTACCGGAAGCACGGACATCACGACCATCTCGCCGGATTTCGCGAACCTGTA TTCCATCAACGCGAATTTCTCGATCACGCGCGAGTTGACGCAGACCAGCTCGTTGACGGCGTCGTACCTTTACACCGCCG GCAACCGCCTGCCGGTCTATCGCAACATCAACGTGGTGCCGGGCGGTACCTTCCTCGCCGATGGGCGGCCGATCTTCGGC AGCGCACGCTACTACCCCGGCTTCGGCAATATCACTTCGGCGGAATCCGTGGGGCACTCCACGTATAACGGCTTGAACGT GACCCTGCGCAAGCAAGCGGCGCGCGGTGTCGAAATGTACGCAACCTACACCTGGTCGCACGCGATCGACGACGCGCCCG AGCAGAACAATATCGATGCCGGCAGCAACCTGCTGAGCGATCCGACCAACCGCCGACGCGACCGCGCCGACTCACTCACC GACAAGCGGCACGTGTTCAACATGACCGGCGTGTTTACGCCGGAGTTCAAGCTCTCGAACAAGGTGGGCAACTATCTGGC GAACCACAACGTGCTGTCGGTCGCGGTGGTCGCGTCGAGCGGCGACCTGTTCAACATGGGCAGCAATCGCGTGCTCAACG GCGATTCCACGGAGGGCAGCGCGTTCCAGCGTCCCCTGTTCGTAGGACGCGACACGATCCGGGGAGGCTACGTGGCGGAG ATCAACGCACGCTACTCGCGGTTGTTCCCGCTGGCGGAGCGGAAGAGCGTGGAATTCCTGGCGGAGAGCACCAATCTGGG CAACCGCCTCAACGTGACGGGCCTGAACTCGACCGCGACAGTAGATACGGCGGGCAACATCACCACTCCGGCAACCTTGG CGCCCAACGCCTCGCGCGATCAGCGCCTGCTGCAACTGGGCCTGCGCTTCAACTGGTAG
Upstream 100 bases:
>100_bases CGGTACTGTTCCCCGATTTGCGCCGGGTGAACGAATTGCAACCCGCGCGGCGTCAGTGACATCTATTAGACACATTCGTC ATAGAGGAAGAGGTTAGCTT
Downstream 100 bases:
>100_bases GCTTTTCCTGACGTTTGGCTTTGACGAAATCGAGCTCGGTCTGCTTCGGTATGCCGGGCTCGAAACATCGCCGGCAGCGC GCCTCGTACATGTCCGACGC
Product: CnaB domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 952; Mature: 952
Protein sequence:
>952_residues MRNIWKLTVVLLFGLALTGNIFGQASAINGEISGTVTDASGAAVVGATVQITNSATGFQQTGKSGDNGLYRFTVLPLGVY EVQVSATGFGSIRSTGNPLTAGAVTTVNVTLPVAGTTTMVDVTATAAITEPSRTDVGSTLSENMTRNLPLVSRNPYNFIL FQPNVSGRPNTEFGVPRKINANGFNGRINYQIDGSNNTESDRAGIRLIPISDNYVAEVQQVSNGFAPEFGNTVGTVFNTV TKSGTNEFHGEGSYLFRRTDFSAKPKLLSSTALVPEVNVDSYSVDGGGHIIKDKLFFFGGFEHVKRDLPGVVTVSAANIA ALGLPASYGDPIPFRQSVYFYMGKGDWQINAKNRLSVRYMHHANDSPYNNGTIGGLNLVSQSYNFVDRSHVGAVQLVSVF NDHIVNELRFQTAYRGQNNTTFSASGTGPVLTVTGIANFGGPNSAGFVYEETTPEVADNFSYVRGTHSFKFGVSTHAIRD RQVQATFAQYNFATIAAYLAAVNGSAPKGYSSFSQVVGNPSLNYNSVFTNFFAQDSWKPMRNLTVTYGLRYDLYQMPSAD KTSPFPFSQSFKTDKNNFGPRLGVAYGLGKDQKTVIRASSGIFYDSPQTDQYRRAISLNGNPAFFTLSATPATSYAPSFP NVFTAVPAGVTGSTDITTISPDFANLYSINANFSITRELTQTSSLTASYLYTAGNRLPVYRNINVVPGGTFLADGRPIFG SARYYPGFGNITSAESVGHSTYNGLNVTLRKQAARGVEMYATYTWSHAIDDAPEQNNIDAGSNLLSDPTNRRRDRADSLT DKRHVFNMTGVFTPEFKLSNKVGNYLANHNVLSVAVVASSGDLFNMGSNRVLNGDSTEGSAFQRPLFVGRDTIRGGYVAE INARYSRLFPLAERKSVEFLAESTNLGNRLNVTGLNSTATVDTAGNITTPATLAPNASRDQRLLQLGLRFNW
Sequences:
>Translated_952_residues MRNIWKLTVVLLFGLALTGNIFGQASAINGEISGTVTDASGAAVVGATVQITNSATGFQQTGKSGDNGLYRFTVLPLGVY EVQVSATGFGSIRSTGNPLTAGAVTTVNVTLPVAGTTTMVDVTATAAITEPSRTDVGSTLSENMTRNLPLVSRNPYNFIL FQPNVSGRPNTEFGVPRKINANGFNGRINYQIDGSNNTESDRAGIRLIPISDNYVAEVQQVSNGFAPEFGNTVGTVFNTV TKSGTNEFHGEGSYLFRRTDFSAKPKLLSSTALVPEVNVDSYSVDGGGHIIKDKLFFFGGFEHVKRDLPGVVTVSAANIA ALGLPASYGDPIPFRQSVYFYMGKGDWQINAKNRLSVRYMHHANDSPYNNGTIGGLNLVSQSYNFVDRSHVGAVQLVSVF NDHIVNELRFQTAYRGQNNTTFSASGTGPVLTVTGIANFGGPNSAGFVYEETTPEVADNFSYVRGTHSFKFGVSTHAIRD RQVQATFAQYNFATIAAYLAAVNGSAPKGYSSFSQVVGNPSLNYNSVFTNFFAQDSWKPMRNLTVTYGLRYDLYQMPSAD KTSPFPFSQSFKTDKNNFGPRLGVAYGLGKDQKTVIRASSGIFYDSPQTDQYRRAISLNGNPAFFTLSATPATSYAPSFP NVFTAVPAGVTGSTDITTISPDFANLYSINANFSITRELTQTSSLTASYLYTAGNRLPVYRNINVVPGGTFLADGRPIFG SARYYPGFGNITSAESVGHSTYNGLNVTLRKQAARGVEMYATYTWSHAIDDAPEQNNIDAGSNLLSDPTNRRRDRADSLT DKRHVFNMTGVFTPEFKLSNKVGNYLANHNVLSVAVVASSGDLFNMGSNRVLNGDSTEGSAFQRPLFVGRDTIRGGYVAE INARYSRLFPLAERKSVEFLAESTNLGNRLNVTGLNSTATVDTAGNITTPATLAPNASRDQRLLQLGLRFNW >Mature_952_residues MRNIWKLTVVLLFGLALTGNIFGQASAINGEISGTVTDASGAAVVGATVQITNSATGFQQTGKSGDNGLYRFTVLPLGVY EVQVSATGFGSIRSTGNPLTAGAVTTVNVTLPVAGTTTMVDVTATAAITEPSRTDVGSTLSENMTRNLPLVSRNPYNFIL FQPNVSGRPNTEFGVPRKINANGFNGRINYQIDGSNNTESDRAGIRLIPISDNYVAEVQQVSNGFAPEFGNTVGTVFNTV TKSGTNEFHGEGSYLFRRTDFSAKPKLLSSTALVPEVNVDSYSVDGGGHIIKDKLFFFGGFEHVKRDLPGVVTVSAANIA ALGLPASYGDPIPFRQSVYFYMGKGDWQINAKNRLSVRYMHHANDSPYNNGTIGGLNLVSQSYNFVDRSHVGAVQLVSVF NDHIVNELRFQTAYRGQNNTTFSASGTGPVLTVTGIANFGGPNSAGFVYEETTPEVADNFSYVRGTHSFKFGVSTHAIRD RQVQATFAQYNFATIAAYLAAVNGSAPKGYSSFSQVVGNPSLNYNSVFTNFFAQDSWKPMRNLTVTYGLRYDLYQMPSAD KTSPFPFSQSFKTDKNNFGPRLGVAYGLGKDQKTVIRASSGIFYDSPQTDQYRRAISLNGNPAFFTLSATPATSYAPSFP NVFTAVPAGVTGSTDITTISPDFANLYSINANFSITRELTQTSSLTASYLYTAGNRLPVYRNINVVPGGTFLADGRPIFG SARYYPGFGNITSAESVGHSTYNGLNVTLRKQAARGVEMYATYTWSHAIDDAPEQNNIDAGSNLLSDPTNRRRDRADSLT DKRHVFNMTGVFTPEFKLSNKVGNYLANHNVLSVAVVASSGDLFNMGSNRVLNGDSTEGSAFQRPLFVGRDTIRGGYVAE INARYSRLFPLAERKSVEFLAESTNLGNRLNVTGLNSTATVDTAGNITTPATLAPNASRDQRLLQLGLRFNW
Specific function: Required for cellular adhesion during fruiting body formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013784 - InterPro: IPR014766 - InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 102706; Mature: 102706
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS00539 PYROKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNIWKLTVVLLFGLALTGNIFGQASAINGEISGTVTDASGAAVVGATVQITNSATGFQQ CCCHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCEEEEEEEEEECCCCCHHH TGKSGDNGLYRFTVLPLGVYEVQVSATGFGSIRSTGNPLTAGAVTTVNVTLPVAGTTTMV CCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCCCCEECCEEEEEEEEEECCCCEEEE DVTATAAITEPSRTDVGSTLSENMTRNLPLVSRNPYNFILFQPNVSGRPNTEFGVPRKIN EEEEEEEECCCCCCCCCCHHHHHHHHCCCEEECCCCEEEEECCCCCCCCCCCCCCCEEEC ANGFNGRINYQIDGSNNTESDRAGIRLIPISDNYVAEVQQVSNGFAPEFGNTVGTVFNTV CCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHH TKSGTNEFHGEGSYLFRRTDFSAKPKLLSSTALVPEVNVDSYSVDGGGHIIKDKLFFFGG HCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCEECCCCCEEECCCCEEEEEEEEEECC FEHVKRDLPGVVTVSAANIAALGLPASYGDPIPFRQSVYFYMGKGDWQINAKNRLSVRYM HHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCCEEEEEEECCEEEECCCCCEEEEEE HHANDSPYNNGTIGGLNLVSQSYNFVDRSHVGAVQLVSVFNDHIVNELRFQTAYRGQNNT ECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCC TFSASGTGPVLTVTGIANFGGPNSAGFVYEETTPEVADNFSYVRGTHSFKFGVSTHAIRD EEEECCCCCEEEEEEEECCCCCCCCCEEEECCCCHHHHCCCEEECCCEEEECCCHHHHCC RQVQATFAQYNFATIAAYLAAVNGSAPKGYSSFSQVVGNPSLNYNSVFTNFFAQDSWKPM CEEEEHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC RNLTVTYGLRYDLYQMPSADKTSPFPFSQSFKTDKNNFGPRLGVAYGLGKDQKTVIRASS CCEEEEEEEEEEHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECC GIFYDSPQTDQYRRAISLNGNPAFFTLSATPATSYAPSFPNVFTAVPAGVTGSTDITTIS CEEECCCCCCHHEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEC PDFANLYSINANFSITRELTQTSSLTASYLYTAGNRLPVYRNINVVPGGTFLADGRPIFG CCCCEEEEECCCEEEEEHHHHHHCCEEEEEEECCCCCEEEEEEEECCCCEEEECCCEEEC SARYYPGFGNITSAESVGHSTYNGLNVTLRKQAARGVEMYATYTWSHAIDDAPEQNNIDA CCEECCCCCCCCCHHHCCCCCCCCEEEEEEHHHCCCEEEEEEEEEHHCCCCCCCCCCCCC GSNLLSDPTNRRRDRADSLTDKRHVFNMTGVFTPEFKLSNKVGNYLANHNVLSVAVVASS CCCHHCCCCHHHHHHHHHCCCCCEEEEECCEECCCEEECHHHHHHHHCCCEEEEEEEECC GDLFNMGSNRVLNGDSTEGSAFQRPLFVGRDTIRGGYVAEINARYSRLFPLAERKSVEFL CCEEECCCCEEECCCCCCCCHHCCCEEECCCCCCCCEEEEECCCHHHHCCCHHCCCCEEE AESTNLGNRLNVTGLNSTATVDTAGNITTPATLAPNASRDQRLLQLGLRFNW ECCCCCCCEEEEEECCCCEEEECCCCCCCCCEECCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MRNIWKLTVVLLFGLALTGNIFGQASAINGEISGTVTDASGAAVVGATVQITNSATGFQQ CCCHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCEEEEEEEEEECCCCCHHH TGKSGDNGLYRFTVLPLGVYEVQVSATGFGSIRSTGNPLTAGAVTTVNVTLPVAGTTTMV CCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCCCCEECCEEEEEEEEEECCCCEEEE DVTATAAITEPSRTDVGSTLSENMTRNLPLVSRNPYNFILFQPNVSGRPNTEFGVPRKIN EEEEEEEECCCCCCCCCCHHHHHHHHCCCEEECCCCEEEEECCCCCCCCCCCCCCCEEEC ANGFNGRINYQIDGSNNTESDRAGIRLIPISDNYVAEVQQVSNGFAPEFGNTVGTVFNTV CCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHH TKSGTNEFHGEGSYLFRRTDFSAKPKLLSSTALVPEVNVDSYSVDGGGHIIKDKLFFFGG HCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCEECCCCCEEECCCCEEEEEEEEEECC FEHVKRDLPGVVTVSAANIAALGLPASYGDPIPFRQSVYFYMGKGDWQINAKNRLSVRYM HHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCCEEEEEEECCEEEECCCCCEEEEEE HHANDSPYNNGTIGGLNLVSQSYNFVDRSHVGAVQLVSVFNDHIVNELRFQTAYRGQNNT ECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCC TFSASGTGPVLTVTGIANFGGPNSAGFVYEETTPEVADNFSYVRGTHSFKFGVSTHAIRD EEEECCCCCEEEEEEEECCCCCCCCCEEEECCCCHHHHCCCEEECCCEEEECCCHHHHCC RQVQATFAQYNFATIAAYLAAVNGSAPKGYSSFSQVVGNPSLNYNSVFTNFFAQDSWKPM CEEEEHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC RNLTVTYGLRYDLYQMPSADKTSPFPFSQSFKTDKNNFGPRLGVAYGLGKDQKTVIRASS CCEEEEEEEEEEHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECC GIFYDSPQTDQYRRAISLNGNPAFFTLSATPATSYAPSFPNVFTAVPAGVTGSTDITTIS CEEECCCCCCHHEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEC PDFANLYSINANFSITRELTQTSSLTASYLYTAGNRLPVYRNINVVPGGTFLADGRPIFG CCCCEEEEECCCEEEEEHHHHHHCCEEEEEEECCCCCEEEEEEEECCCCEEEECCCEEEC SARYYPGFGNITSAESVGHSTYNGLNVTLRKQAARGVEMYATYTWSHAIDDAPEQNNIDA CCEECCCCCCCCCHHHCCCCCCCCEEEEEEHHHCCCEEEEEEEEEHHCCCCCCCCCCCCC GSNLLSDPTNRRRDRADSLTDKRHVFNMTGVFTPEFKLSNKVGNYLANHNVLSVAVVASS CCCHHCCCCHHHHHHHHHCCCCCEEEEECCEECCCEEECHHHHHHHHCCCEEEEEEEECC GDLFNMGSNRVLNGDSTEGSAFQRPLFVGRDTIRGGYVAEINARYSRLFPLAERKSVEFL CCEEECCCCEEECCCCCCCCHHCCCEEECCCCCCCCEEEEECCCHHHHCCCHHCCCCEEE AESTNLGNRLNVTGLNSTATVDTAGNITTPATLAPNASRDQRLLQLGLRFNW ECCCCCCCEEEEEECCCCEEEECCCCCCCCCEECCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335633 [H]